Protein–RNA interactions for Protein: E9Q9P8

Rdh16f1, RDH16 family member 1, mousemouse

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rdh16f1E9Q9P8 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Rdh16f1E9Q9P8 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
Rdh16f1E9Q9P8 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rdh16f1E9Q9P8 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rdh16f1E9Q9P8 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rdh16f1E9Q9P8 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rdh16f1E9Q9P8 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rdh16f1E9Q9P8 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Rdh16f1E9Q9P8 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Rdh16f1E9Q9P8 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rdh16f1E9Q9P8 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC17.49■□□□□ 0.39
Rdh16f1E9Q9P8 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Rdh16f1E9Q9P8 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Rdh16f1E9Q9P8 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Rdh16f1E9Q9P8 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Rdh16f1E9Q9P8 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Rdh16f1E9Q9P8 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Rdh16f1E9Q9P8 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC17.49■□□□□ 0.39
Rdh16f1E9Q9P8 Gm43137-201ENSMUST00000198052 594 ntBASIC17.49■□□□□ 0.39
Rdh16f1E9Q9P8 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Rdh16f1E9Q9P8 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC17.49■□□□□ 0.39
Rdh16f1E9Q9P8 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Rdh16f1E9Q9P8 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Rdh16f1E9Q9P8 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC17.49■□□□□ 0.39
Rdh16f1E9Q9P8 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Rdh16f1E9Q9P8 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rdh16f1E9Q9P8 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rdh16f1E9Q9P8 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rdh16f1E9Q9P8 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rdh16f1E9Q9P8 Gm27045-201ENSMUST00000182145 1402 ntBASIC17.48■□□□□ 0.39
Rdh16f1E9Q9P8 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rdh16f1E9Q9P8 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rdh16f1E9Q9P8 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rdh16f1E9Q9P8 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC17.48■□□□□ 0.39
Rdh16f1E9Q9P8 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
Rdh16f1E9Q9P8 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rdh16f1E9Q9P8 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Rdh16f1E9Q9P8 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rdh16f1E9Q9P8 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rdh16f1E9Q9P8 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Rdh16f1E9Q9P8 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC17.47■□□□□ 0.39
Rdh16f1E9Q9P8 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Rdh16f1E9Q9P8 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC17.47■□□□□ 0.39
Rdh16f1E9Q9P8 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC17.47■□□□□ 0.39
Rdh16f1E9Q9P8 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC17.47■□□□□ 0.39
Rdh16f1E9Q9P8 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC17.47■□□□□ 0.39
Rdh16f1E9Q9P8 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC17.47■□□□□ 0.39
Rdh16f1E9Q9P8 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Rdh16f1E9Q9P8 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Rdh16f1E9Q9P8 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Rdh16f1E9Q9P8 Notumos-201ENSMUST00000151998 2659 ntBASIC17.46■□□□□ 0.39
Rdh16f1E9Q9P8 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Rdh16f1E9Q9P8 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC17.46■□□□□ 0.39
Rdh16f1E9Q9P8 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Rdh16f1E9Q9P8 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Rdh16f1E9Q9P8 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
Rdh16f1E9Q9P8 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Rdh16f1E9Q9P8 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
Rdh16f1E9Q9P8 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Rdh16f1E9Q9P8 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
Rdh16f1E9Q9P8 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
Rdh16f1E9Q9P8 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Rdh16f1E9Q9P8 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC17.46■□□□□ 0.39
Rdh16f1E9Q9P8 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.38
Rdh16f1E9Q9P8 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Rdh16f1E9Q9P8 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC17.46■□□□□ 0.38
Rdh16f1E9Q9P8 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Rdh16f1E9Q9P8 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Rdh16f1E9Q9P8 Gm34220-201ENSMUST00000223001 2709 ntBASIC17.45■□□□□ 0.38
Rdh16f1E9Q9P8 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Rdh16f1E9Q9P8 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Rdh16f1E9Q9P8 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC17.45■□□□□ 0.38
Rdh16f1E9Q9P8 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC17.45■□□□□ 0.38
Rdh16f1E9Q9P8 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Rdh16f1E9Q9P8 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Rdh16f1E9Q9P8 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rdh16f1E9Q9P8 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Rdh16f1E9Q9P8 Gm5576-201ENSMUST00000075809 1236 ntBASIC17.44■□□□□ 0.38
Rdh16f1E9Q9P8 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rdh16f1E9Q9P8 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rdh16f1E9Q9P8 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Rdh16f1E9Q9P8 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rdh16f1E9Q9P8 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
Rdh16f1E9Q9P8 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Rdh16f1E9Q9P8 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Rdh16f1E9Q9P8 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
Rdh16f1E9Q9P8 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rdh16f1E9Q9P8 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Rdh16f1E9Q9P8 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rdh16f1E9Q9P8 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rdh16f1E9Q9P8 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC17.42■□□□□ 0.38
Rdh16f1E9Q9P8 Gm15043-201ENSMUST00000118843 1543 ntBASIC17.42■□□□□ 0.38
Rdh16f1E9Q9P8 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rdh16f1E9Q9P8 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
Rdh16f1E9Q9P8 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Rdh16f1E9Q9P8 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC17.42■□□□□ 0.38
Rdh16f1E9Q9P8 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Rdh16f1E9Q9P8 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC17.42■□□□□ 0.38
Rdh16f1E9Q9P8 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
Rdh16f1E9Q9P8 Appbp2os-202ENSMUST00000206972 447 ntBASIC17.42■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 25.2 ms