Protein–RNA interactions for Protein: E9Q963

Gm1661, Predicted gene 1661, mousemouse

Predictions only

Length 441 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm1661E9Q963 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Gm1661E9Q963 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Gm1661E9Q963 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
Gm1661E9Q963 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
Gm1661E9Q963 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Gm1661E9Q963 Gm37035-201ENSMUST00000194809 2148 ntBASIC21.21■□□□□ 0.99
Gm1661E9Q963 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Gm1661E9Q963 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Gm1661E9Q963 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Gm1661E9Q963 Gm10209-201ENSMUST00000203397 1607 ntBASIC21.21■□□□□ 0.99
Gm1661E9Q963 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC21.21■□□□□ 0.99
Gm1661E9Q963 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.99
Gm1661E9Q963 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Gm1661E9Q963 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Gm1661E9Q963 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Gm1661E9Q963 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Gm1661E9Q963 Gm43017-201ENSMUST00000198296 752 ntBASIC21.2■□□□□ 0.98
Gm1661E9Q963 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Gm1661E9Q963 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC21.2■□□□□ 0.98
Gm1661E9Q963 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Gm1661E9Q963 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Gm1661E9Q963 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Gm1661E9Q963 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Gm1661E9Q963 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
Gm1661E9Q963 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC21.19■□□□□ 0.98
Gm1661E9Q963 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
Gm1661E9Q963 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Gm1661E9Q963 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Gm1661E9Q963 Gm27045-201ENSMUST00000182145 1402 ntBASIC21.19■□□□□ 0.98
Gm1661E9Q963 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Gm1661E9Q963 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Gm1661E9Q963 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC21.18■□□□□ 0.98
Gm1661E9Q963 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Gm1661E9Q963 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC21.18■□□□□ 0.98
Gm1661E9Q963 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Gm1661E9Q963 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
Gm1661E9Q963 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Gm1661E9Q963 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC21.18■□□□□ 0.98
Gm1661E9Q963 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Gm1661E9Q963 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Gm1661E9Q963 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Gm1661E9Q963 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC21.18■□□□□ 0.98
Gm1661E9Q963 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Gm1661E9Q963 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC21.17■□□□□ 0.98
Gm1661E9Q963 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Gm1661E9Q963 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Gm1661E9Q963 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Gm1661E9Q963 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Gm1661E9Q963 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Gm1661E9Q963 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC21.17■□□□□ 0.98
Gm1661E9Q963 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
Gm1661E9Q963 Gm21168-201ENSMUST00000199646 1096 ntBASIC21.17■□□□□ 0.98
Gm1661E9Q963 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
Gm1661E9Q963 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Gm1661E9Q963 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Gm1661E9Q963 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Gm1661E9Q963 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Gm1661E9Q963 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Gm1661E9Q963 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Gm1661E9Q963 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Gm1661E9Q963 Notumos-201ENSMUST00000151998 2659 ntBASIC21.16■□□□□ 0.98
Gm1661E9Q963 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Gm1661E9Q963 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Gm1661E9Q963 Gm6085-201ENSMUST00000182774 1470 ntBASIC21.16■□□□□ 0.98
Gm1661E9Q963 Gm43173-201ENSMUST00000202246 593 ntBASIC21.16■□□□□ 0.98
Gm1661E9Q963 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Gm1661E9Q963 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Gm1661E9Q963 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Gm1661E9Q963 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Gm1661E9Q963 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC21.15■□□□□ 0.98
Gm1661E9Q963 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Gm1661E9Q963 Gm12251-201ENSMUST00000117893 792 ntBASIC21.15■□□□□ 0.98
Gm1661E9Q963 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
Gm1661E9Q963 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Gm1661E9Q963 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Gm1661E9Q963 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Gm1661E9Q963 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC21.15■□□□□ 0.98
Gm1661E9Q963 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.98
Gm1661E9Q963 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Gm1661E9Q963 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC21.14■□□□□ 0.98
Gm1661E9Q963 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Gm1661E9Q963 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
Gm1661E9Q963 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC21.14■□□□□ 0.98
Gm1661E9Q963 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Gm1661E9Q963 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC21.14■□□□□ 0.97
Gm1661E9Q963 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Gm1661E9Q963 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.97
Gm1661E9Q963 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Gm1661E9Q963 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Gm1661E9Q963 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
Gm1661E9Q963 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Gm1661E9Q963 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Gm1661E9Q963 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC21.13■□□□□ 0.97
Gm1661E9Q963 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
Gm1661E9Q963 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
Gm1661E9Q963 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Gm1661E9Q963 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Gm1661E9Q963 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Gm1661E9Q963 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Gm1661E9Q963 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 23 ms