Protein–RNA interactions for Protein: E9Q2N0

Cpsf4l, Cleavage and polyadenylation-specific factor 4-like, mousemouse

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4lE9Q2N0 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cpsf4lE9Q2N0 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cpsf4lE9Q2N0 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cpsf4lE9Q2N0 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC16.75■□□□□ 0.27
Cpsf4lE9Q2N0 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cpsf4lE9Q2N0 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cpsf4lE9Q2N0 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Cpsf4lE9Q2N0 Spcs1-204ENSMUST00000226782 949 ntBASIC16.75■□□□□ 0.27
Cpsf4lE9Q2N0 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Cpsf4lE9Q2N0 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cpsf4lE9Q2N0 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Cpsf4lE9Q2N0 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Cpsf4lE9Q2N0 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cpsf4lE9Q2N0 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cpsf4lE9Q2N0 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
Cpsf4lE9Q2N0 Gm6802-201ENSMUST00000167843 1983 ntBASIC16.75■□□□□ 0.27
Cpsf4lE9Q2N0 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC16.75■□□□□ 0.27
Cpsf4lE9Q2N0 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cpsf4lE9Q2N0 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cpsf4lE9Q2N0 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC16.74■□□□□ 0.27
Cpsf4lE9Q2N0 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cpsf4lE9Q2N0 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC16.74■□□□□ 0.27
Cpsf4lE9Q2N0 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Cpsf4lE9Q2N0 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC16.74■□□□□ 0.27
Cpsf4lE9Q2N0 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cpsf4lE9Q2N0 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Cpsf4lE9Q2N0 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cpsf4lE9Q2N0 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cpsf4lE9Q2N0 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cpsf4lE9Q2N0 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cpsf4lE9Q2N0 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Cpsf4lE9Q2N0 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Cpsf4lE9Q2N0 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cpsf4lE9Q2N0 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cpsf4lE9Q2N0 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC16.73■□□□□ 0.27
Cpsf4lE9Q2N0 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cpsf4lE9Q2N0 Mir7075-201ENSMUST00000184187 82 ntBASIC16.73■□□□□ 0.27
Cpsf4lE9Q2N0 Gm7160-202ENSMUST00000188519 1027 ntBASIC16.73■□□□□ 0.27
Cpsf4lE9Q2N0 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC16.73■□□□□ 0.27
Cpsf4lE9Q2N0 Gm45417-201ENSMUST00000209533 758 ntBASIC16.73■□□□□ 0.27
Cpsf4lE9Q2N0 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Cpsf4lE9Q2N0 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Cpsf4lE9Q2N0 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cpsf4lE9Q2N0 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cpsf4lE9Q2N0 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cpsf4lE9Q2N0 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Cpsf4lE9Q2N0 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Cpsf4lE9Q2N0 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC16.72■□□□□ 0.27
Cpsf4lE9Q2N0 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Cpsf4lE9Q2N0 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cpsf4lE9Q2N0 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cpsf4lE9Q2N0 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
Cpsf4lE9Q2N0 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cpsf4lE9Q2N0 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cpsf4lE9Q2N0 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC16.72■□□□□ 0.27
Cpsf4lE9Q2N0 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cpsf4lE9Q2N0 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cpsf4lE9Q2N0 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cpsf4lE9Q2N0 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Cpsf4lE9Q2N0 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Cpsf4lE9Q2N0 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Cpsf4lE9Q2N0 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC16.71■□□□□ 0.27
Cpsf4lE9Q2N0 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Cpsf4lE9Q2N0 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC16.71■□□□□ 0.27
Cpsf4lE9Q2N0 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
Cpsf4lE9Q2N0 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Cpsf4lE9Q2N0 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Cpsf4lE9Q2N0 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC16.71■□□□□ 0.27
Cpsf4lE9Q2N0 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Cpsf4lE9Q2N0 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC16.71■□□□□ 0.27
Cpsf4lE9Q2N0 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
Cpsf4lE9Q2N0 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Cpsf4lE9Q2N0 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC16.71■□□□□ 0.26
Cpsf4lE9Q2N0 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.26
Cpsf4lE9Q2N0 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.26
Cpsf4lE9Q2N0 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cpsf4lE9Q2N0 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cpsf4lE9Q2N0 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Cpsf4lE9Q2N0 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cpsf4lE9Q2N0 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cpsf4lE9Q2N0 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cpsf4lE9Q2N0 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cpsf4lE9Q2N0 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Cpsf4lE9Q2N0 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cpsf4lE9Q2N0 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC16.7■□□□□ 0.26
Cpsf4lE9Q2N0 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Cpsf4lE9Q2N0 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Cpsf4lE9Q2N0 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Cpsf4lE9Q2N0 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
Cpsf4lE9Q2N0 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Cpsf4lE9Q2N0 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Cpsf4lE9Q2N0 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Cpsf4lE9Q2N0 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Cpsf4lE9Q2N0 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Cpsf4lE9Q2N0 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Cpsf4lE9Q2N0 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC16.69■□□□□ 0.26
Cpsf4lE9Q2N0 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cpsf4lE9Q2N0 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
Cpsf4lE9Q2N0 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cpsf4lE9Q2N0 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms