Protein–RNA interactions for Protein: E9PUP3

Slc4a9, Anion exchange protein, mousemouse

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc4a9E9PUP3 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Slc4a9E9PUP3 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
Slc4a9E9PUP3 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Slc4a9E9PUP3 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Slc4a9E9PUP3 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Slc4a9E9PUP3 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Slc4a9E9PUP3 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
Slc4a9E9PUP3 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC23.15■■□□□ 1.3
Slc4a9E9PUP3 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
Slc4a9E9PUP3 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Slc4a9E9PUP3 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC23.15■■□□□ 1.3
Slc4a9E9PUP3 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
Slc4a9E9PUP3 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
Slc4a9E9PUP3 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
Slc4a9E9PUP3 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC23.14■■□□□ 1.29
Slc4a9E9PUP3 Gm26524-201ENSMUST00000192339 390 ntBASIC23.14■■□□□ 1.29
Slc4a9E9PUP3 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC23.14■■□□□ 1.29
Slc4a9E9PUP3 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
Slc4a9E9PUP3 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC23.14■■□□□ 1.29
Slc4a9E9PUP3 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Slc4a9E9PUP3 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
Slc4a9E9PUP3 Gm38205-201ENSMUST00000192243 258 ntBASIC23.13■■□□□ 1.29
Slc4a9E9PUP3 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC23.13■■□□□ 1.29
Slc4a9E9PUP3 CT030146.1-201ENSMUST00000220919 217 ntBASIC23.13■■□□□ 1.29
Slc4a9E9PUP3 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC23.13■■□□□ 1.29
Slc4a9E9PUP3 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Slc4a9E9PUP3 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Slc4a9E9PUP3 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Slc4a9E9PUP3 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Slc4a9E9PUP3 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC23.12■■□□□ 1.29
Slc4a9E9PUP3 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
Slc4a9E9PUP3 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC23.12■■□□□ 1.29
Slc4a9E9PUP3 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC23.12■■□□□ 1.29
Slc4a9E9PUP3 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC23.12■■□□□ 1.29
Slc4a9E9PUP3 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
Slc4a9E9PUP3 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
Slc4a9E9PUP3 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC23.11■■□□□ 1.29
Slc4a9E9PUP3 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC23.11■■□□□ 1.29
Slc4a9E9PUP3 Gm13534-201ENSMUST00000121169 513 ntBASIC23.11■■□□□ 1.29
Slc4a9E9PUP3 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC23.11■■□□□ 1.29
Slc4a9E9PUP3 Gm27275-201ENSMUST00000184318 272 ntBASIC23.11■■□□□ 1.29
Slc4a9E9PUP3 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC23.11■■□□□ 1.29
Slc4a9E9PUP3 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC23.11■■□□□ 1.29
Slc4a9E9PUP3 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Slc4a9E9PUP3 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Slc4a9E9PUP3 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC23.1■■□□□ 1.29
Slc4a9E9PUP3 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC23.1■■□□□ 1.29
Slc4a9E9PUP3 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC23.1■■□□□ 1.29
Slc4a9E9PUP3 AL672049.1-201ENSMUST00000197943 91 ntBASIC23.1■■□□□ 1.29
Slc4a9E9PUP3 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC23.1■■□□□ 1.29
Slc4a9E9PUP3 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
Slc4a9E9PUP3 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC23.1■■□□□ 1.29
Slc4a9E9PUP3 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
Slc4a9E9PUP3 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
Slc4a9E9PUP3 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Slc4a9E9PUP3 Gm715-201ENSMUST00000117865 831 ntBASIC23.09■■□□□ 1.29
Slc4a9E9PUP3 Rab3c-203ENSMUST00000224180 967 ntBASIC23.09■■□□□ 1.29
Slc4a9E9PUP3 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC23.09■■□□□ 1.29
Slc4a9E9PUP3 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Slc4a9E9PUP3 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
Slc4a9E9PUP3 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC23.08■■□□□ 1.29
Slc4a9E9PUP3 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
Slc4a9E9PUP3 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC23.08■■□□□ 1.29
Slc4a9E9PUP3 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC23.08■■□□□ 1.29
Slc4a9E9PUP3 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC23.08■■□□□ 1.29
Slc4a9E9PUP3 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
Slc4a9E9PUP3 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Slc4a9E9PUP3 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC23.08■■□□□ 1.29
Slc4a9E9PUP3 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC23.08■■□□□ 1.29
Slc4a9E9PUP3 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC23.08■■□□□ 1.29
Slc4a9E9PUP3 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
Slc4a9E9PUP3 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC23.08■■□□□ 1.29
Slc4a9E9PUP3 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC23.08■■□□□ 1.28
Slc4a9E9PUP3 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC23.08■■□□□ 1.28
Slc4a9E9PUP3 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Slc4a9E9PUP3 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Slc4a9E9PUP3 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
Slc4a9E9PUP3 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC23.07■■□□□ 1.28
Slc4a9E9PUP3 Gm5643-201ENSMUST00000117081 966 ntBASIC23.07■■□□□ 1.28
Slc4a9E9PUP3 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Slc4a9E9PUP3 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Slc4a9E9PUP3 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC23.07■■□□□ 1.28
Slc4a9E9PUP3 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC23.07■■□□□ 1.28
Slc4a9E9PUP3 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
Slc4a9E9PUP3 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC23.06■■□□□ 1.28
Slc4a9E9PUP3 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Slc4a9E9PUP3 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Slc4a9E9PUP3 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
Slc4a9E9PUP3 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Slc4a9E9PUP3 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC23.05■■□□□ 1.28
Slc4a9E9PUP3 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC23.05■■□□□ 1.28
Slc4a9E9PUP3 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Slc4a9E9PUP3 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
Slc4a9E9PUP3 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Slc4a9E9PUP3 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Slc4a9E9PUP3 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC23.05■■□□□ 1.28
Slc4a9E9PUP3 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Slc4a9E9PUP3 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC23.05■■□□□ 1.28
Slc4a9E9PUP3 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Slc4a9E9PUP3 Gm11643-201ENSMUST00000119578 864 ntBASIC23.04■■□□□ 1.28
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms