Protein–RNA interactions for Protein: E0CXC2

Gm28043, E3 ubiquitin-protein ligase RNF8, mousemouse

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28043E0CXC2 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Gm28043E0CXC2 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC19.67■□□□□ 0.74
Gm28043E0CXC2 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC19.67■□□□□ 0.74
Gm28043E0CXC2 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Gm28043E0CXC2 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Gm28043E0CXC2 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Gm28043E0CXC2 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Gm28043E0CXC2 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Gm28043E0CXC2 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Gm28043E0CXC2 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
Gm28043E0CXC2 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Gm28043E0CXC2 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Gm28043E0CXC2 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Gm28043E0CXC2 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Gm28043E0CXC2 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Gm28043E0CXC2 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Gm28043E0CXC2 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Gm28043E0CXC2 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Gm28043E0CXC2 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
Gm28043E0CXC2 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Gm28043E0CXC2 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Gm28043E0CXC2 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Gm28043E0CXC2 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Gm28043E0CXC2 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Gm28043E0CXC2 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Gm28043E0CXC2 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Gm28043E0CXC2 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC19.65■□□□□ 0.74
Gm28043E0CXC2 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC19.65■□□□□ 0.74
Gm28043E0CXC2 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Gm28043E0CXC2 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC19.65■□□□□ 0.74
Gm28043E0CXC2 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
Gm28043E0CXC2 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Gm28043E0CXC2 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC19.65■□□□□ 0.74
Gm28043E0CXC2 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Gm28043E0CXC2 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC19.65■□□□□ 0.74
Gm28043E0CXC2 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Gm28043E0CXC2 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.74
Gm28043E0CXC2 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.74
Gm28043E0CXC2 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Gm28043E0CXC2 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Gm28043E0CXC2 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Gm28043E0CXC2 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Gm28043E0CXC2 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Gm28043E0CXC2 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC19.64■□□□□ 0.73
Gm28043E0CXC2 Gm22238-201ENSMUST00000175222 88 ntBASIC19.64■□□□□ 0.73
Gm28043E0CXC2 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Gm28043E0CXC2 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Gm28043E0CXC2 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Gm28043E0CXC2 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC19.64■□□□□ 0.73
Gm28043E0CXC2 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Gm28043E0CXC2 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Gm28043E0CXC2 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Gm28043E0CXC2 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Gm28043E0CXC2 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
Gm28043E0CXC2 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Gm28043E0CXC2 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Gm28043E0CXC2 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Gm28043E0CXC2 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Gm28043E0CXC2 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC19.63■□□□□ 0.73
Gm28043E0CXC2 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
Gm28043E0CXC2 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC19.63■□□□□ 0.73
Gm28043E0CXC2 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Gm28043E0CXC2 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Gm28043E0CXC2 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Gm28043E0CXC2 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Gm28043E0CXC2 Gm7143-201ENSMUST00000222811 859 ntBASIC19.62■□□□□ 0.73
Gm28043E0CXC2 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC19.61■□□□□ 0.73
Gm28043E0CXC2 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Gm28043E0CXC2 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC19.61■□□□□ 0.73
Gm28043E0CXC2 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
Gm28043E0CXC2 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Gm28043E0CXC2 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC19.61■□□□□ 0.73
Gm28043E0CXC2 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC19.61■□□□□ 0.73
Gm28043E0CXC2 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Gm28043E0CXC2 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
Gm28043E0CXC2 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Gm28043E0CXC2 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Gm28043E0CXC2 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Gm28043E0CXC2 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Gm28043E0CXC2 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC19.6■□□□□ 0.73
Gm28043E0CXC2 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC19.6■□□□□ 0.73
Gm28043E0CXC2 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC19.6■□□□□ 0.73
Gm28043E0CXC2 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
Gm28043E0CXC2 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC19.6■□□□□ 0.73
Gm28043E0CXC2 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Gm28043E0CXC2 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
Gm28043E0CXC2 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
Gm28043E0CXC2 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Gm28043E0CXC2 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Gm28043E0CXC2 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC19.6■□□□□ 0.73
Gm28043E0CXC2 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
Gm28043E0CXC2 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
Gm28043E0CXC2 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Gm28043E0CXC2 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Gm28043E0CXC2 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
Gm28043E0CXC2 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Gm28043E0CXC2 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC19.59■□□□□ 0.73
Gm28043E0CXC2 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Gm28043E0CXC2 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Gm28043E0CXC2 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC19.59■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 32.3 ms