Protein–RNA interactions for Protein: D3YZU1

Shank1, SH3 and multiple ankyrin repeat domains protein 1, mousemouse

Predictions only

Length 2,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank1D3YZU1 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC17.7■□□□□ 0.42
Shank1D3YZU1 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Shank1D3YZU1 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Shank1D3YZU1 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Shank1D3YZU1 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Shank1D3YZU1 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Shank1D3YZU1 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC17.69■□□□□ 0.42
Shank1D3YZU1 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Shank1D3YZU1 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Shank1D3YZU1 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Shank1D3YZU1 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Shank1D3YZU1 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Shank1D3YZU1 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Shank1D3YZU1 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Shank1D3YZU1 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Shank1D3YZU1 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Shank1D3YZU1 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Shank1D3YZU1 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC17.68■□□□□ 0.42
Shank1D3YZU1 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Shank1D3YZU1 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Shank1D3YZU1 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Shank1D3YZU1 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Shank1D3YZU1 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Shank1D3YZU1 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Shank1D3YZU1 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Shank1D3YZU1 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Shank1D3YZU1 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Shank1D3YZU1 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC17.67■□□□□ 0.42
Shank1D3YZU1 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Shank1D3YZU1 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Shank1D3YZU1 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Shank1D3YZU1 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Shank1D3YZU1 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Shank1D3YZU1 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC17.66■□□□□ 0.42
Shank1D3YZU1 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Shank1D3YZU1 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Shank1D3YZU1 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Shank1D3YZU1 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Shank1D3YZU1 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC17.66■□□□□ 0.42
Shank1D3YZU1 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Shank1D3YZU1 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Shank1D3YZU1 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Shank1D3YZU1 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Shank1D3YZU1 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC17.66■□□□□ 0.42
Shank1D3YZU1 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Shank1D3YZU1 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Shank1D3YZU1 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Shank1D3YZU1 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Shank1D3YZU1 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC17.65■□□□□ 0.42
Shank1D3YZU1 AC135637.1-201ENSMUST00000227750 365 ntBASIC17.65■□□□□ 0.42
Shank1D3YZU1 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Shank1D3YZU1 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
Shank1D3YZU1 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Shank1D3YZU1 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Shank1D3YZU1 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Shank1D3YZU1 Gm13168-201ENSMUST00000121771 632 ntBASIC17.64■□□□□ 0.42
Shank1D3YZU1 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC17.64■□□□□ 0.42
Shank1D3YZU1 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.42
Shank1D3YZU1 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Shank1D3YZU1 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
Shank1D3YZU1 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Shank1D3YZU1 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC17.64■□□□□ 0.41
Shank1D3YZU1 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Shank1D3YZU1 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Shank1D3YZU1 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC17.64■□□□□ 0.41
Shank1D3YZU1 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Shank1D3YZU1 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Shank1D3YZU1 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Shank1D3YZU1 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Shank1D3YZU1 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Shank1D3YZU1 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Shank1D3YZU1 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Shank1D3YZU1 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Shank1D3YZU1 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Shank1D3YZU1 Gm6211-202ENSMUST00000167849 925 ntBASIC17.63■□□□□ 0.41
Shank1D3YZU1 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Shank1D3YZU1 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Shank1D3YZU1 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Shank1D3YZU1 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Shank1D3YZU1 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Shank1D3YZU1 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Shank1D3YZU1 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Shank1D3YZU1 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC17.62■□□□□ 0.41
Shank1D3YZU1 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC17.62■□□□□ 0.41
Shank1D3YZU1 Gm8520-201ENSMUST00000186517 868 ntBASIC17.62■□□□□ 0.41
Shank1D3YZU1 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Shank1D3YZU1 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC17.62■□□□□ 0.41
Shank1D3YZU1 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Shank1D3YZU1 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Shank1D3YZU1 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Shank1D3YZU1 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Shank1D3YZU1 Gm7290-201ENSMUST00000104990 617 ntBASIC17.62■□□□□ 0.41
Shank1D3YZU1 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Shank1D3YZU1 Gm12918-201ENSMUST00000120234 636 ntBASIC17.62■□□□□ 0.41
Shank1D3YZU1 Gm15710-201ENSMUST00000121821 636 ntBASIC17.62■□□□□ 0.41
Shank1D3YZU1 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Shank1D3YZU1 Gm5075-201ENSMUST00000196916 622 ntBASIC17.62■□□□□ 0.41
Shank1D3YZU1 Gm20049-201ENSMUST00000219950 730 ntBASIC17.62■□□□□ 0.41
Shank1D3YZU1 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC17.62■□□□□ 0.41
Shank1D3YZU1 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC17.62■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 18.1 ms