Protein–RNA interactions for Protein: D3YXG0

Hmcn1, Hemicentin-1, mousemouse

Predictions only

Length 5,634 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmcn1D3YXG0 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Hmcn1D3YXG0 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
Hmcn1D3YXG0 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC5.85□□□□□ -1.47
Hmcn1D3YXG0 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC5.85□□□□□ -1.47
Hmcn1D3YXG0 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC5.85□□□□□ -1.47
Hmcn1D3YXG0 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
Hmcn1D3YXG0 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC5.85□□□□□ -1.47
Hmcn1D3YXG0 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Hmcn1D3YXG0 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Hmcn1D3YXG0 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Hmcn1D3YXG0 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC5.85□□□□□ -1.47
Hmcn1D3YXG0 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC5.85□□□□□ -1.47
Hmcn1D3YXG0 Mir1199-201ENSMUST00000117015 119 ntBASIC5.85□□□□□ -1.47
Hmcn1D3YXG0 Gm13146-201ENSMUST00000118508 780 ntBASIC5.85□□□□□ -1.47
Hmcn1D3YXG0 Gm10698-201ENSMUST00000182663 604 ntBASIC5.85□□□□□ -1.47
Hmcn1D3YXG0 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Hmcn1D3YXG0 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Hmcn1D3YXG0 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC5.85□□□□□ -1.47
Hmcn1D3YXG0 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Hmcn1D3YXG0 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC5.84□□□□□ -1.47
Hmcn1D3YXG0 Gm9103-201ENSMUST00000119371 405 ntBASIC5.84□□□□□ -1.47
Hmcn1D3YXG0 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
Hmcn1D3YXG0 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC5.84□□□□□ -1.47
Hmcn1D3YXG0 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Hmcn1D3YXG0 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Hmcn1D3YXG0 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Hmcn1D3YXG0 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Hmcn1D3YXG0 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC5.84□□□□□ -1.47
Hmcn1D3YXG0 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
Hmcn1D3YXG0 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC5.84□□□□□ -1.47
Hmcn1D3YXG0 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC5.84□□□□□ -1.47
Hmcn1D3YXG0 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Hmcn1D3YXG0 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Hmcn1D3YXG0 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Hmcn1D3YXG0 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
Hmcn1D3YXG0 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
Hmcn1D3YXG0 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
Hmcn1D3YXG0 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
Hmcn1D3YXG0 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
Hmcn1D3YXG0 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Hmcn1D3YXG0 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
Hmcn1D3YXG0 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Hmcn1D3YXG0 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC5.84□□□□□ -1.47
Hmcn1D3YXG0 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Hmcn1D3YXG0 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Hmcn1D3YXG0 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Hmcn1D3YXG0 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC5.84□□□□□ -1.47
Hmcn1D3YXG0 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Hmcn1D3YXG0 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Hmcn1D3YXG0 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Hmcn1D3YXG0 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Hmcn1D3YXG0 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC5.84□□□□□ -1.48
Hmcn1D3YXG0 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.48
Hmcn1D3YXG0 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.48
Hmcn1D3YXG0 Gm13534-201ENSMUST00000121169 513 ntBASIC5.84□□□□□ -1.48
Hmcn1D3YXG0 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC5.84□□□□□ -1.48
Hmcn1D3YXG0 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC5.84□□□□□ -1.48
Hmcn1D3YXG0 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC5.84□□□□□ -1.48
Hmcn1D3YXG0 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC5.84□□□□□ -1.48
Hmcn1D3YXG0 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.48
Hmcn1D3YXG0 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
Hmcn1D3YXG0 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Hmcn1D3YXG0 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC5.83□□□□□ -1.48
Hmcn1D3YXG0 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC5.83□□□□□ -1.48
Hmcn1D3YXG0 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Hmcn1D3YXG0 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC5.83□□□□□ -1.48
Hmcn1D3YXG0 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC5.83□□□□□ -1.48
Hmcn1D3YXG0 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC5.83□□□□□ -1.48
Hmcn1D3YXG0 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC5.83□□□□□ -1.48
Hmcn1D3YXG0 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
Hmcn1D3YXG0 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Hmcn1D3YXG0 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC5.83□□□□□ -1.48
Hmcn1D3YXG0 AC133598.3-202ENSMUST00000224219 531 ntBASIC5.83□□□□□ -1.48
Hmcn1D3YXG0 AC154649.1-201ENSMUST00000227392 384 ntBASIC5.83□□□□□ -1.48
Hmcn1D3YXG0 Gm5417-201ENSMUST00000079706 384 ntBASIC5.83□□□□□ -1.48
Hmcn1D3YXG0 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC5.83□□□□□ -1.48
Hmcn1D3YXG0 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Hmcn1D3YXG0 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC5.83□□□□□ -1.48
Hmcn1D3YXG0 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC5.83□□□□□ -1.48
Hmcn1D3YXG0 CT030146.1-201ENSMUST00000220919 217 ntBASIC5.83□□□□□ -1.48
Hmcn1D3YXG0 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC5.83□□□□□ -1.48
Hmcn1D3YXG0 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Hmcn1D3YXG0 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC5.83□□□□□ -1.48
Hmcn1D3YXG0 Gm8784-201ENSMUST00000222096 1435 ntBASIC5.83□□□□□ -1.48
Hmcn1D3YXG0 Dio3-201ENSMUST00000097228 1449 ntBASIC5.83□□□□□ -1.48
Hmcn1D3YXG0 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC5.83□□□□□ -1.48
Hmcn1D3YXG0 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC5.83□□□□□ -1.48
Hmcn1D3YXG0 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Hmcn1D3YXG0 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Hmcn1D3YXG0 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC5.82□□□□□ -1.48
Hmcn1D3YXG0 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Hmcn1D3YXG0 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC5.82□□□□□ -1.48
Hmcn1D3YXG0 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC5.82□□□□□ -1.48
Hmcn1D3YXG0 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
Hmcn1D3YXG0 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Hmcn1D3YXG0 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Hmcn1D3YXG0 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Hmcn1D3YXG0 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Hmcn1D3YXG0 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Hmcn1D3YXG0 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
Retrieved 100 of 76,532 protein–RNA pairs in 17.8 ms