Protein–RNA interactions for Protein: B9EKX1

Ptchd4, Patched domain-containing protein 4, mousemouse

Predictions only

Length 904 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptchd4B9EKX1 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Ptchd4B9EKX1 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Ptchd4B9EKX1 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Ptchd4B9EKX1 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
Ptchd4B9EKX1 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC21.34■■□□□ 1.01
Ptchd4B9EKX1 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Ptchd4B9EKX1 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Ptchd4B9EKX1 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Ptchd4B9EKX1 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Ptchd4B9EKX1 Reep4-203ENSMUST00000226563 1444 ntBASIC21.34■■□□□ 1.01
Ptchd4B9EKX1 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Ptchd4B9EKX1 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Ptchd4B9EKX1 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC21.33■■□□□ 1.01
Ptchd4B9EKX1 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC21.33■■□□□ 1.01
Ptchd4B9EKX1 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Ptchd4B9EKX1 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1
Ptchd4B9EKX1 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Ptchd4B9EKX1 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Ptchd4B9EKX1 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC21.32■■□□□ 1
Ptchd4B9EKX1 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Ptchd4B9EKX1 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Ptchd4B9EKX1 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC21.32■■□□□ 1
Ptchd4B9EKX1 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC21.32■■□□□ 1
Ptchd4B9EKX1 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC21.32■■□□□ 1
Ptchd4B9EKX1 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC21.32■■□□□ 1
Ptchd4B9EKX1 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Ptchd4B9EKX1 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Ptchd4B9EKX1 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC21.32■■□□□ 1
Ptchd4B9EKX1 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
Ptchd4B9EKX1 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC21.31■■□□□ 1
Ptchd4B9EKX1 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Ptchd4B9EKX1 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Ptchd4B9EKX1 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Ptchd4B9EKX1 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
Ptchd4B9EKX1 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC21.31■■□□□ 1
Ptchd4B9EKX1 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC21.31■■□□□ 1
Ptchd4B9EKX1 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
Ptchd4B9EKX1 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC21.31■■□□□ 1
Ptchd4B9EKX1 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Ptchd4B9EKX1 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC21.31■■□□□ 1
Ptchd4B9EKX1 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC21.31■■□□□ 1
Ptchd4B9EKX1 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Ptchd4B9EKX1 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC21.31■■□□□ 1
Ptchd4B9EKX1 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
Ptchd4B9EKX1 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
Ptchd4B9EKX1 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
Ptchd4B9EKX1 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
Ptchd4B9EKX1 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
Ptchd4B9EKX1 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC21.3■■□□□ 1
Ptchd4B9EKX1 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Ptchd4B9EKX1 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Ptchd4B9EKX1 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC21.3■■□□□ 1
Ptchd4B9EKX1 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC21.3■■□□□ 1
Ptchd4B9EKX1 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC21.3■■□□□ 1
Ptchd4B9EKX1 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Ptchd4B9EKX1 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
Ptchd4B9EKX1 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Ptchd4B9EKX1 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
Ptchd4B9EKX1 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
Ptchd4B9EKX1 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC21.29■■□□□ 1
Ptchd4B9EKX1 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
Ptchd4B9EKX1 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Ptchd4B9EKX1 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC21.29■■□□□ 1
Ptchd4B9EKX1 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC21.29■■□□□ 1
Ptchd4B9EKX1 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Ptchd4B9EKX1 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Ptchd4B9EKX1 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC21.28■■□□□ 1
Ptchd4B9EKX1 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Ptchd4B9EKX1 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
Ptchd4B9EKX1 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC21.28■■□□□ 1
Ptchd4B9EKX1 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC21.28■■□□□ 1
Ptchd4B9EKX1 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC21.28■■□□□ 1
Ptchd4B9EKX1 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC21.28■■□□□ 1
Ptchd4B9EKX1 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC21.28■■□□□ 1
Ptchd4B9EKX1 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
Ptchd4B9EKX1 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Ptchd4B9EKX1 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC21.28■■□□□ 1
Ptchd4B9EKX1 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC21.28■■□□□ 1
Ptchd4B9EKX1 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC21.28■■□□□ 1
Ptchd4B9EKX1 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC21.27■■□□□ 1
Ptchd4B9EKX1 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC21.27■■□□□ 1
Ptchd4B9EKX1 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
Ptchd4B9EKX1 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
Ptchd4B9EKX1 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
Ptchd4B9EKX1 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC21.26■□□□□ 0.99
Ptchd4B9EKX1 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Ptchd4B9EKX1 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Ptchd4B9EKX1 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC21.26■□□□□ 0.99
Ptchd4B9EKX1 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Ptchd4B9EKX1 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
Ptchd4B9EKX1 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Ptchd4B9EKX1 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
Ptchd4B9EKX1 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC21.25■□□□□ 0.99
Ptchd4B9EKX1 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Ptchd4B9EKX1 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
Ptchd4B9EKX1 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Ptchd4B9EKX1 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Ptchd4B9EKX1 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
Ptchd4B9EKX1 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Ptchd4B9EKX1 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms