Protein–RNA interactions for Protein: A6H584

Col6a5, Collagen alpha-5(VI) chain, mousemouse

Predictions only

Length 2,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a5A6H584 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Col6a5A6H584 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Col6a5A6H584 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Col6a5A6H584 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Col6a5A6H584 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Col6a5A6H584 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Col6a5A6H584 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Col6a5A6H584 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Col6a5A6H584 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC15.17■□□□□ 0.02
Col6a5A6H584 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC15.17■□□□□ 0.02
Col6a5A6H584 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Col6a5A6H584 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Col6a5A6H584 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Col6a5A6H584 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Col6a5A6H584 Gm10231-201ENSMUST00000181584 441 ntBASIC15.17■□□□□ 0.02
Col6a5A6H584 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Col6a5A6H584 Gm10459-201ENSMUST00000202708 1155 ntBASIC15.17■□□□□ 0.02
Col6a5A6H584 Gm10175-202ENSMUST00000208752 441 ntBASIC15.17■□□□□ 0.02
Col6a5A6H584 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Col6a5A6H584 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Col6a5A6H584 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC15.17■□□□□ 0.02
Col6a5A6H584 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Col6a5A6H584 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC15.16■□□□□ 0.02
Col6a5A6H584 Gm13534-201ENSMUST00000121169 513 ntBASIC15.16■□□□□ 0.02
Col6a5A6H584 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Col6a5A6H584 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Col6a5A6H584 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Col6a5A6H584 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Col6a5A6H584 Gm6728-201ENSMUST00000178117 1065 ntBASIC15.16■□□□□ 0.02
Col6a5A6H584 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Col6a5A6H584 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC15.16■□□□□ 0.02
Col6a5A6H584 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Col6a5A6H584 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Col6a5A6H584 Mir5122-201ENSMUST00000175004 89 ntBASIC15.15■□□□□ 0.02
Col6a5A6H584 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Col6a5A6H584 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Col6a5A6H584 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Col6a5A6H584 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Col6a5A6H584 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC15.15■□□□□ 0.02
Col6a5A6H584 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Col6a5A6H584 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Col6a5A6H584 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Col6a5A6H584 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Col6a5A6H584 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Col6a5A6H584 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC15.14■□□□□ 0.01
Col6a5A6H584 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Col6a5A6H584 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Col6a5A6H584 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC15.14■□□□□ 0.01
Col6a5A6H584 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Col6a5A6H584 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Col6a5A6H584 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC15.14■□□□□ 0.01
Col6a5A6H584 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Col6a5A6H584 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC15.13■□□□□ 0.01
Col6a5A6H584 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Col6a5A6H584 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Col6a5A6H584 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Col6a5A6H584 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Col6a5A6H584 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Col6a5A6H584 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC15.13■□□□□ 0.01
Col6a5A6H584 AC154649.1-201ENSMUST00000227392 384 ntBASIC15.13■□□□□ 0.01
Col6a5A6H584 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Col6a5A6H584 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Col6a5A6H584 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Col6a5A6H584 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Col6a5A6H584 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC15.13■□□□□ 0.01
Col6a5A6H584 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Col6a5A6H584 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Col6a5A6H584 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC15.12■□□□□ 0.01
Col6a5A6H584 Gm10517-202ENSMUST00000192970 758 ntBASIC15.12■□□□□ 0.01
Col6a5A6H584 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC15.12■□□□□ 0.01
Col6a5A6H584 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC15.12■□□□□ 0.01
Col6a5A6H584 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC15.12■□□□□ 0.01
Col6a5A6H584 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Col6a5A6H584 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Col6a5A6H584 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Col6a5A6H584 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
Col6a5A6H584 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC15.12■□□□□ 0.01
Col6a5A6H584 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC15.12■□□□□ 0.01
Col6a5A6H584 Gm43799-201ENSMUST00000201845 579 ntBASIC15.12■□□□□ 0.01
Col6a5A6H584 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC15.11■□□□□ 0.01
Col6a5A6H584 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC15.11■□□□□ 0.01
Col6a5A6H584 Mir1199-201ENSMUST00000117015 119 ntBASIC15.11■□□□□ 0.01
Col6a5A6H584 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Col6a5A6H584 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Col6a5A6H584 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC15.11■□□□□ 0.01
Col6a5A6H584 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Col6a5A6H584 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Col6a5A6H584 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Col6a5A6H584 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Col6a5A6H584 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC15.11■□□□□ 0.01
Col6a5A6H584 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Col6a5A6H584 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Col6a5A6H584 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC15.11■□□□□ 0.01
Col6a5A6H584 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC15.11■□□□□ 0.01
Col6a5A6H584 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC15.11■□□□□ 0.01
Col6a5A6H584 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Col6a5A6H584 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Col6a5A6H584 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Col6a5A6H584 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Col6a5A6H584 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 26.9 ms