Protein–RNA interactions for Protein: A2ACP1

Ttc39a, Tetratricopeptide repeat protein 39A, mousemouse

Predictions only

Length 578 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc39aA2ACP1 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ttc39aA2ACP1 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ttc39aA2ACP1 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ttc39aA2ACP1 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Ttc39aA2ACP1 AC122428.2-201ENSMUST00000216321 1832 ntBASIC19.3■□□□□ 0.68
Ttc39aA2ACP1 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ttc39aA2ACP1 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC19.29■□□□□ 0.68
Ttc39aA2ACP1 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ttc39aA2ACP1 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ttc39aA2ACP1 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
Ttc39aA2ACP1 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ttc39aA2ACP1 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ttc39aA2ACP1 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ttc39aA2ACP1 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ttc39aA2ACP1 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ttc39aA2ACP1 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ttc39aA2ACP1 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ttc39aA2ACP1 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ttc39aA2ACP1 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC19.28■□□□□ 0.68
Ttc39aA2ACP1 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ttc39aA2ACP1 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ttc39aA2ACP1 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC19.28■□□□□ 0.68
Ttc39aA2ACP1 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ttc39aA2ACP1 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ttc39aA2ACP1 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ttc39aA2ACP1 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Ttc39aA2ACP1 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ttc39aA2ACP1 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ttc39aA2ACP1 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC19.28■□□□□ 0.68
Ttc39aA2ACP1 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ttc39aA2ACP1 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ttc39aA2ACP1 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC19.27■□□□□ 0.68
Ttc39aA2ACP1 Gm37179-201ENSMUST00000194862 823 ntBASIC19.27■□□□□ 0.68
Ttc39aA2ACP1 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Ttc39aA2ACP1 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.67
Ttc39aA2ACP1 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.67
Ttc39aA2ACP1 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Ttc39aA2ACP1 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Ttc39aA2ACP1 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Ttc39aA2ACP1 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Ttc39aA2ACP1 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ttc39aA2ACP1 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC19.26■□□□□ 0.67
Ttc39aA2ACP1 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Ttc39aA2ACP1 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Ttc39aA2ACP1 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ttc39aA2ACP1 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Ttc39aA2ACP1 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Ttc39aA2ACP1 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Ttc39aA2ACP1 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ttc39aA2ACP1 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ttc39aA2ACP1 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ttc39aA2ACP1 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC19.26■□□□□ 0.67
Ttc39aA2ACP1 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ttc39aA2ACP1 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ttc39aA2ACP1 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ttc39aA2ACP1 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ttc39aA2ACP1 Gm14281-201ENSMUST00000121700 1294 ntBASIC19.25■□□□□ 0.67
Ttc39aA2ACP1 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ttc39aA2ACP1 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ttc39aA2ACP1 Gm27801-201ENSMUST00000184174 223 ntBASIC19.25■□□□□ 0.67
Ttc39aA2ACP1 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ttc39aA2ACP1 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC19.25■□□□□ 0.67
Ttc39aA2ACP1 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC19.25■□□□□ 0.67
Ttc39aA2ACP1 Gm43006-201ENSMUST00000197702 1602 ntBASIC19.25■□□□□ 0.67
Ttc39aA2ACP1 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC19.25■□□□□ 0.67
Ttc39aA2ACP1 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Ttc39aA2ACP1 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ttc39aA2ACP1 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ttc39aA2ACP1 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ttc39aA2ACP1 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC19.24■□□□□ 0.67
Ttc39aA2ACP1 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ttc39aA2ACP1 Gm10571-201ENSMUST00000097869 1638 ntBASIC19.24■□□□□ 0.67
Ttc39aA2ACP1 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ttc39aA2ACP1 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ttc39aA2ACP1 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Ttc39aA2ACP1 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ttc39aA2ACP1 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ttc39aA2ACP1 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ttc39aA2ACP1 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ttc39aA2ACP1 Gm9988-201ENSMUST00000069786 435 ntBASIC19.23■□□□□ 0.67
Ttc39aA2ACP1 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Ttc39aA2ACP1 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ttc39aA2ACP1 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ttc39aA2ACP1 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ttc39aA2ACP1 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ttc39aA2ACP1 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ttc39aA2ACP1 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Ttc39aA2ACP1 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Ttc39aA2ACP1 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Ttc39aA2ACP1 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ttc39aA2ACP1 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Ttc39aA2ACP1 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ttc39aA2ACP1 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ttc39aA2ACP1 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC19.22■□□□□ 0.67
Ttc39aA2ACP1 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ttc39aA2ACP1 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ttc39aA2ACP1 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ttc39aA2ACP1 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC19.21■□□□□ 0.67
Ttc39aA2ACP1 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Ttc39aA2ACP1 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 18.4 ms