Protein–RNA interactions for Protein: A1A546

Isx, Intestine-specific homeobox, mousemouse

Predictions only

Length 240 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IsxA1A546 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC18.31■□□□□ 0.52
IsxA1A546 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
IsxA1A546 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
IsxA1A546 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
IsxA1A546 AC126028.2-201ENSMUST00000228100 1833 ntBASIC18.31■□□□□ 0.52
IsxA1A546 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
IsxA1A546 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
IsxA1A546 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
IsxA1A546 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
IsxA1A546 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
IsxA1A546 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
IsxA1A546 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC18.3■□□□□ 0.52
IsxA1A546 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
IsxA1A546 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
IsxA1A546 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
IsxA1A546 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC18.3■□□□□ 0.52
IsxA1A546 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC18.3■□□□□ 0.52
IsxA1A546 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
IsxA1A546 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
IsxA1A546 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
IsxA1A546 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
IsxA1A546 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
IsxA1A546 Grk6-206ENSMUST00000224995 2971 ntBASIC18.29■□□□□ 0.52
IsxA1A546 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
IsxA1A546 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
IsxA1A546 Gm5067-201ENSMUST00000170449 1009 ntBASIC18.29■□□□□ 0.52
IsxA1A546 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC18.29■□□□□ 0.52
IsxA1A546 Gm42900-201ENSMUST00000197184 2167 ntBASIC18.29■□□□□ 0.52
IsxA1A546 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
IsxA1A546 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC18.29■□□□□ 0.52
IsxA1A546 Gm5953-201ENSMUST00000220644 2616 ntBASIC18.29■□□□□ 0.52
IsxA1A546 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
IsxA1A546 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
IsxA1A546 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
IsxA1A546 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
IsxA1A546 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
IsxA1A546 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
IsxA1A546 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
IsxA1A546 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
IsxA1A546 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
IsxA1A546 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
IsxA1A546 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
IsxA1A546 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
IsxA1A546 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
IsxA1A546 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
IsxA1A546 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC18.27■□□□□ 0.52
IsxA1A546 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
IsxA1A546 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
IsxA1A546 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
IsxA1A546 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
IsxA1A546 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC18.27■□□□□ 0.52
IsxA1A546 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
IsxA1A546 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
IsxA1A546 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
IsxA1A546 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
IsxA1A546 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
IsxA1A546 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
IsxA1A546 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
IsxA1A546 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
IsxA1A546 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
IsxA1A546 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
IsxA1A546 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
IsxA1A546 Gm6802-201ENSMUST00000167843 1983 ntBASIC18.26■□□□□ 0.51
IsxA1A546 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
IsxA1A546 Gm10420-201ENSMUST00000121713 882 ntBASIC18.26■□□□□ 0.51
IsxA1A546 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
IsxA1A546 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
IsxA1A546 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC18.26■□□□□ 0.51
IsxA1A546 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
IsxA1A546 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
IsxA1A546 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
IsxA1A546 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
IsxA1A546 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
IsxA1A546 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
IsxA1A546 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
IsxA1A546 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
IsxA1A546 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
IsxA1A546 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
IsxA1A546 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
IsxA1A546 Gm5540-201ENSMUST00000131852 1848 ntBASIC18.25■□□□□ 0.51
IsxA1A546 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
IsxA1A546 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
IsxA1A546 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
IsxA1A546 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
IsxA1A546 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
IsxA1A546 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC18.24■□□□□ 0.51
IsxA1A546 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
IsxA1A546 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
IsxA1A546 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
IsxA1A546 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
IsxA1A546 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
IsxA1A546 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
IsxA1A546 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
IsxA1A546 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
IsxA1A546 Gm6627-201ENSMUST00000218299 2386 ntBASIC18.23■□□□□ 0.51
IsxA1A546 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
IsxA1A546 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
IsxA1A546 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
IsxA1A546 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC18.23■□□□□ 0.51
IsxA1A546 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 11.4 ms