Protein–RNA interactions for Protein: A0A1B0GSW2

Gm28729, Predicted gene 28729, mousemouse

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28729A0A1B0GSW2 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Gm28729A0A1B0GSW2 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Gm28729A0A1B0GSW2 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Gm28729A0A1B0GSW2 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Gm28729A0A1B0GSW2 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Gm28729A0A1B0GSW2 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Gm28729A0A1B0GSW2 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Gm28729A0A1B0GSW2 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Gm28729A0A1B0GSW2 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Gm28729A0A1B0GSW2 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC19.4■□□□□ 0.7
Gm28729A0A1B0GSW2 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC19.4■□□□□ 0.7
Gm28729A0A1B0GSW2 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Gm28729A0A1B0GSW2 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Gm28729A0A1B0GSW2 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Gm28729A0A1B0GSW2 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Gm28729A0A1B0GSW2 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Gm28729A0A1B0GSW2 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC19.39■□□□□ 0.7
Gm28729A0A1B0GSW2 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Gm28729A0A1B0GSW2 Gm27011-201ENSMUST00000182352 972 ntBASIC19.39■□□□□ 0.69
Gm28729A0A1B0GSW2 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
Gm28729A0A1B0GSW2 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Gm28729A0A1B0GSW2 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Gm28729A0A1B0GSW2 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Gm28729A0A1B0GSW2 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Gm28729A0A1B0GSW2 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Gm28729A0A1B0GSW2 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
Gm28729A0A1B0GSW2 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Gm28729A0A1B0GSW2 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
Gm28729A0A1B0GSW2 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Gm28729A0A1B0GSW2 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Gm28729A0A1B0GSW2 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Gm28729A0A1B0GSW2 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC19.37■□□□□ 0.69
Gm28729A0A1B0GSW2 Ap3s1-204ENSMUST00000225520 957 ntBASIC19.37■□□□□ 0.69
Gm28729A0A1B0GSW2 AC112142.1-201ENSMUST00000228796 918 ntBASIC19.37■□□□□ 0.69
Gm28729A0A1B0GSW2 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Gm28729A0A1B0GSW2 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC19.37■□□□□ 0.69
Gm28729A0A1B0GSW2 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Gm28729A0A1B0GSW2 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Gm28729A0A1B0GSW2 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Gm28729A0A1B0GSW2 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC19.36■□□□□ 0.69
Gm28729A0A1B0GSW2 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Gm28729A0A1B0GSW2 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Gm28729A0A1B0GSW2 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Gm28729A0A1B0GSW2 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Gm28729A0A1B0GSW2 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC19.35■□□□□ 0.69
Gm28729A0A1B0GSW2 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Gm28729A0A1B0GSW2 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Gm28729A0A1B0GSW2 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Gm28729A0A1B0GSW2 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Gm28729A0A1B0GSW2 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC19.35■□□□□ 0.69
Gm28729A0A1B0GSW2 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Gm28729A0A1B0GSW2 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Gm28729A0A1B0GSW2 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Gm28729A0A1B0GSW2 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Gm28729A0A1B0GSW2 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC19.34■□□□□ 0.69
Gm28729A0A1B0GSW2 Gm10602-201ENSMUST00000098239 609 ntBASIC19.34■□□□□ 0.69
Gm28729A0A1B0GSW2 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Gm28729A0A1B0GSW2 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
Gm28729A0A1B0GSW2 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Gm28729A0A1B0GSW2 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
Gm28729A0A1B0GSW2 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Gm28729A0A1B0GSW2 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Gm28729A0A1B0GSW2 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC19.33■□□□□ 0.68
Gm28729A0A1B0GSW2 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Gm28729A0A1B0GSW2 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Gm28729A0A1B0GSW2 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC19.33■□□□□ 0.68
Gm28729A0A1B0GSW2 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
Gm28729A0A1B0GSW2 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Gm28729A0A1B0GSW2 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC19.32■□□□□ 0.68
Gm28729A0A1B0GSW2 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC19.32■□□□□ 0.68
Gm28729A0A1B0GSW2 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Gm28729A0A1B0GSW2 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
Gm28729A0A1B0GSW2 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Gm28729A0A1B0GSW2 Gm7514-201ENSMUST00000209475 934 ntBASIC19.32■□□□□ 0.68
Gm28729A0A1B0GSW2 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Gm28729A0A1B0GSW2 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Gm28729A0A1B0GSW2 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Gm28729A0A1B0GSW2 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Gm28729A0A1B0GSW2 Snhg20-203ENSMUST00000182811 2153 ntBASIC19.32■□□□□ 0.68
Gm28729A0A1B0GSW2 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Gm28729A0A1B0GSW2 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Gm28729A0A1B0GSW2 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Gm28729A0A1B0GSW2 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Gm28729A0A1B0GSW2 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Gm28729A0A1B0GSW2 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
Gm28729A0A1B0GSW2 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Gm28729A0A1B0GSW2 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Gm28729A0A1B0GSW2 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Gm28729A0A1B0GSW2 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC19.31■□□□□ 0.68
Gm28729A0A1B0GSW2 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Gm28729A0A1B0GSW2 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Gm28729A0A1B0GSW2 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Gm28729A0A1B0GSW2 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC19.31■□□□□ 0.68
Gm28729A0A1B0GSW2 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Gm28729A0A1B0GSW2 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Gm28729A0A1B0GSW2 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Gm28729A0A1B0GSW2 Gm42911-201ENSMUST00000199360 1630 ntBASIC19.3■□□□□ 0.68
Gm28729A0A1B0GSW2 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Gm28729A0A1B0GSW2 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Gm28729A0A1B0GSW2 CT030146.1-201ENSMUST00000220919 217 ntBASIC19.3■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 23.9 ms