Protein–RNA interactions for Protein: A0A140T8P8

Trbv17, T cell receptor beta, variable 17 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv17A0A140T8P8 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trbv17A0A140T8P8 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC15.08■□□□□ 0
Trbv17A0A140T8P8 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC15.08■□□□□ 0
Trbv17A0A140T8P8 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
Trbv17A0A140T8P8 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trbv17A0A140T8P8 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC15.08■□□□□ 0
Trbv17A0A140T8P8 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trbv17A0A140T8P8 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trbv17A0A140T8P8 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC15.07■□□□□ 0
Trbv17A0A140T8P8 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trbv17A0A140T8P8 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC15.07■□□□□ 0
Trbv17A0A140T8P8 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Trbv17A0A140T8P8 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC15.07■□□□□ 0
Trbv17A0A140T8P8 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
Trbv17A0A140T8P8 Gm43530-201ENSMUST00000195920 274 ntBASIC15.07■□□□□ 0
Trbv17A0A140T8P8 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Trbv17A0A140T8P8 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trbv17A0A140T8P8 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trbv17A0A140T8P8 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Trbv17A0A140T8P8 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Trbv17A0A140T8P8 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC15.07■□□□□ 0
Trbv17A0A140T8P8 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC15.06■□□□□ 0
Trbv17A0A140T8P8 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Trbv17A0A140T8P8 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trbv17A0A140T8P8 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC15.06■□□□□ 0
Trbv17A0A140T8P8 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
Trbv17A0A140T8P8 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC15.06■□□□□ 0
Trbv17A0A140T8P8 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC15.06■□□□□ 0
Trbv17A0A140T8P8 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trbv17A0A140T8P8 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC15.06■□□□□ 0
Trbv17A0A140T8P8 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC15.06■□□□□ 0
Trbv17A0A140T8P8 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC15.06■□□□□ 0
Trbv17A0A140T8P8 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trbv17A0A140T8P8 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
Trbv17A0A140T8P8 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trbv17A0A140T8P8 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Trbv17A0A140T8P8 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Trbv17A0A140T8P8 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trbv17A0A140T8P8 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC15.05■□□□□ 0
Trbv17A0A140T8P8 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Trbv17A0A140T8P8 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Trbv17A0A140T8P8 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Trbv17A0A140T8P8 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC15.05■□□□□ -0
Trbv17A0A140T8P8 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC15.05■□□□□ -0
Trbv17A0A140T8P8 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Trbv17A0A140T8P8 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Trbv17A0A140T8P8 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Trbv17A0A140T8P8 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
Trbv17A0A140T8P8 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC15.05■□□□□ -0
Trbv17A0A140T8P8 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
Trbv17A0A140T8P8 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
Trbv17A0A140T8P8 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
Trbv17A0A140T8P8 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
Trbv17A0A140T8P8 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trbv17A0A140T8P8 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trbv17A0A140T8P8 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trbv17A0A140T8P8 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trbv17A0A140T8P8 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trbv17A0A140T8P8 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trbv17A0A140T8P8 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trbv17A0A140T8P8 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC15.04■□□□□ -0
Trbv17A0A140T8P8 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Trbv17A0A140T8P8 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trbv17A0A140T8P8 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Trbv17A0A140T8P8 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC15.04■□□□□ -0
Trbv17A0A140T8P8 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trbv17A0A140T8P8 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trbv17A0A140T8P8 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trbv17A0A140T8P8 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trbv17A0A140T8P8 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trbv17A0A140T8P8 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trbv17A0A140T8P8 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC15.03■□□□□ -0
Trbv17A0A140T8P8 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trbv17A0A140T8P8 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC15.03■□□□□ -0
Trbv17A0A140T8P8 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trbv17A0A140T8P8 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Trbv17A0A140T8P8 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trbv17A0A140T8P8 AC166356.1-201ENSMUST00000228236 1426 ntBASIC15.03■□□□□ -0
Trbv17A0A140T8P8 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trbv17A0A140T8P8 Gm12922-201ENSMUST00000120626 809 ntBASIC15.03■□□□□ -0
Trbv17A0A140T8P8 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
Trbv17A0A140T8P8 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC15.03■□□□□ -0
Trbv17A0A140T8P8 Hsf1-207ENSMUST00000228371 2102 ntBASIC15.03■□□□□ -0
Trbv17A0A140T8P8 Golgb1-201ENSMUST00000023534 498 ntBASIC15.03■□□□□ -0
Trbv17A0A140T8P8 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Trbv17A0A140T8P8 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
Trbv17A0A140T8P8 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trbv17A0A140T8P8 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Trbv17A0A140T8P8 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC15.03■□□□□ -0
Trbv17A0A140T8P8 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Trbv17A0A140T8P8 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Trbv17A0A140T8P8 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Trbv17A0A140T8P8 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Trbv17A0A140T8P8 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC15.02■□□□□ -0
Trbv17A0A140T8P8 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Trbv17A0A140T8P8 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC15.02■□□□□ -0
Trbv17A0A140T8P8 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC15.02■□□□□ -0
Trbv17A0A140T8P8 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Trbv17A0A140T8P8 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Trbv17A0A140T8P8 Krt8-ps-201ENSMUST00000208495 945 ntBASIC15.02■□□□□ -0
Retrieved 100 of 76,532 protein–RNA pairs in 14.9 ms