Protein–RNA interactions for Protein: A0A0G2JG37

Trav9d-4, T cell receptor alpha variable 9D-4 (Fragment), mousemouse

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9d-4A0A0G2JG37 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav9d-4A0A0G2JG37 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC13.51□□□□□ -0.25
Trav9d-4A0A0G2JG37 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav9d-4A0A0G2JG37 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Trav9d-4A0A0G2JG37 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav9d-4A0A0G2JG37 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav9d-4A0A0G2JG37 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav9d-4A0A0G2JG37 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
Trav9d-4A0A0G2JG37 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav9d-4A0A0G2JG37 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav9d-4A0A0G2JG37 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Trav9d-4A0A0G2JG37 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav9d-4A0A0G2JG37 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav9d-4A0A0G2JG37 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav9d-4A0A0G2JG37 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC13.5□□□□□ -0.25
Trav9d-4A0A0G2JG37 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC13.5□□□□□ -0.25
Trav9d-4A0A0G2JG37 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
Trav9d-4A0A0G2JG37 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC13.5□□□□□ -0.25
Trav9d-4A0A0G2JG37 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
Trav9d-4A0A0G2JG37 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav9d-4A0A0G2JG37 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav9d-4A0A0G2JG37 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav9d-4A0A0G2JG37 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Trav9d-4A0A0G2JG37 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav9d-4A0A0G2JG37 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav9d-4A0A0G2JG37 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav9d-4A0A0G2JG37 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Trav9d-4A0A0G2JG37 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav9d-4A0A0G2JG37 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav9d-4A0A0G2JG37 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav9d-4A0A0G2JG37 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Trav9d-4A0A0G2JG37 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav9d-4A0A0G2JG37 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Trav9d-4A0A0G2JG37 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav9d-4A0A0G2JG37 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav9d-4A0A0G2JG37 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
Trav9d-4A0A0G2JG37 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav9d-4A0A0G2JG37 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav9d-4A0A0G2JG37 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC13.48□□□□□ -0.25
Trav9d-4A0A0G2JG37 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Trav9d-4A0A0G2JG37 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav9d-4A0A0G2JG37 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Trav9d-4A0A0G2JG37 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav9d-4A0A0G2JG37 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav9d-4A0A0G2JG37 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav9d-4A0A0G2JG37 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav9d-4A0A0G2JG37 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Trav9d-4A0A0G2JG37 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav9d-4A0A0G2JG37 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav9d-4A0A0G2JG37 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav9d-4A0A0G2JG37 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav9d-4A0A0G2JG37 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC13.48□□□□□ -0.25
Trav9d-4A0A0G2JG37 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav9d-4A0A0G2JG37 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav9d-4A0A0G2JG37 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav9d-4A0A0G2JG37 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav9d-4A0A0G2JG37 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Trav9d-4A0A0G2JG37 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav9d-4A0A0G2JG37 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC13.47□□□□□ -0.25
Trav9d-4A0A0G2JG37 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Trav9d-4A0A0G2JG37 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav9d-4A0A0G2JG37 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav9d-4A0A0G2JG37 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav9d-4A0A0G2JG37 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Trav9d-4A0A0G2JG37 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Trav9d-4A0A0G2JG37 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav9d-4A0A0G2JG37 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Trav9d-4A0A0G2JG37 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav9d-4A0A0G2JG37 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC13.47□□□□□ -0.25
Trav9d-4A0A0G2JG37 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav9d-4A0A0G2JG37 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Trav9d-4A0A0G2JG37 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Trav9d-4A0A0G2JG37 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav9d-4A0A0G2JG37 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav9d-4A0A0G2JG37 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
Trav9d-4A0A0G2JG37 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav9d-4A0A0G2JG37 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav9d-4A0A0G2JG37 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Trav9d-4A0A0G2JG37 Gm14523-201ENSMUST00000117260 558 ntBASIC13.46□□□□□ -0.25
Trav9d-4A0A0G2JG37 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC13.46□□□□□ -0.25
Trav9d-4A0A0G2JG37 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Trav9d-4A0A0G2JG37 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav9d-4A0A0G2JG37 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.26
Trav9d-4A0A0G2JG37 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav9d-4A0A0G2JG37 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Trav9d-4A0A0G2JG37 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav9d-4A0A0G2JG37 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC13.45□□□□□ -0.26
Trav9d-4A0A0G2JG37 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav9d-4A0A0G2JG37 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Trav9d-4A0A0G2JG37 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav9d-4A0A0G2JG37 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
Trav9d-4A0A0G2JG37 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav9d-4A0A0G2JG37 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav9d-4A0A0G2JG37 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav9d-4A0A0G2JG37 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav9d-4A0A0G2JG37 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC13.44□□□□□ -0.26
Trav9d-4A0A0G2JG37 Gm10461-201ENSMUST00000202073 4786 ntBASIC13.44□□□□□ -0.26
Trav9d-4A0A0G2JG37 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav9d-4A0A0G2JG37 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
Trav9d-4A0A0G2JG37 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 15.6 ms