Protein–RNA interactions for Protein: A0A0A6YXN5

Ighv1-43, Immunoglobulin heavy variable V1-43 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-43A0A0A6YXN5 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ighv1-43A0A0A6YXN5 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC18.29■□□□□ 0.52
Ighv1-43A0A0A6YXN5 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Ighv1-43A0A0A6YXN5 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ighv1-43A0A0A6YXN5 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ighv1-43A0A0A6YXN5 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ighv1-43A0A0A6YXN5 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
Ighv1-43A0A0A6YXN5 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ighv1-43A0A0A6YXN5 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ighv1-43A0A0A6YXN5 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ighv1-43A0A0A6YXN5 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
Ighv1-43A0A0A6YXN5 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC18.28■□□□□ 0.52
Ighv1-43A0A0A6YXN5 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ighv1-43A0A0A6YXN5 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC18.28■□□□□ 0.52
Ighv1-43A0A0A6YXN5 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Ighv1-43A0A0A6YXN5 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC18.28■□□□□ 0.52
Ighv1-43A0A0A6YXN5 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ighv1-43A0A0A6YXN5 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ighv1-43A0A0A6YXN5 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Ighv1-43A0A0A6YXN5 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC18.28■□□□□ 0.52
Ighv1-43A0A0A6YXN5 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Ighv1-43A0A0A6YXN5 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Ighv1-43A0A0A6YXN5 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Ighv1-43A0A0A6YXN5 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Ighv1-43A0A0A6YXN5 Gm27801-201ENSMUST00000184174 223 ntBASIC18.27■□□□□ 0.52
Ighv1-43A0A0A6YXN5 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Ighv1-43A0A0A6YXN5 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Ighv1-43A0A0A6YXN5 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Ighv1-43A0A0A6YXN5 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC18.27■□□□□ 0.52
Ighv1-43A0A0A6YXN5 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Ighv1-43A0A0A6YXN5 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Ighv1-43A0A0A6YXN5 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Ighv1-43A0A0A6YXN5 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ighv1-43A0A0A6YXN5 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ighv1-43A0A0A6YXN5 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC18.26■□□□□ 0.51
Ighv1-43A0A0A6YXN5 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC18.26■□□□□ 0.51
Ighv1-43A0A0A6YXN5 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Ighv1-43A0A0A6YXN5 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ighv1-43A0A0A6YXN5 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ighv1-43A0A0A6YXN5 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC18.26■□□□□ 0.51
Ighv1-43A0A0A6YXN5 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ighv1-43A0A0A6YXN5 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ighv1-43A0A0A6YXN5 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ighv1-43A0A0A6YXN5 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Ighv1-43A0A0A6YXN5 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC18.25■□□□□ 0.51
Ighv1-43A0A0A6YXN5 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ighv1-43A0A0A6YXN5 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ighv1-43A0A0A6YXN5 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ighv1-43A0A0A6YXN5 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ighv1-43A0A0A6YXN5 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ighv1-43A0A0A6YXN5 Gm14281-201ENSMUST00000121700 1294 ntBASIC18.25■□□□□ 0.51
Ighv1-43A0A0A6YXN5 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC18.25■□□□□ 0.51
Ighv1-43A0A0A6YXN5 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ighv1-43A0A0A6YXN5 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ighv1-43A0A0A6YXN5 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC18.24■□□□□ 0.51
Ighv1-43A0A0A6YXN5 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Ighv1-43A0A0A6YXN5 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Ighv1-43A0A0A6YXN5 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Ighv1-43A0A0A6YXN5 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Ighv1-43A0A0A6YXN5 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Ighv1-43A0A0A6YXN5 Gm26571-201ENSMUST00000181399 666 ntBASIC18.24■□□□□ 0.51
Ighv1-43A0A0A6YXN5 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Ighv1-43A0A0A6YXN5 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Ighv1-43A0A0A6YXN5 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ighv1-43A0A0A6YXN5 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC18.23■□□□□ 0.51
Ighv1-43A0A0A6YXN5 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Ighv1-43A0A0A6YXN5 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ighv1-43A0A0A6YXN5 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ighv1-43A0A0A6YXN5 Gm42778-201ENSMUST00000199644 553 ntBASIC18.23■□□□□ 0.51
Ighv1-43A0A0A6YXN5 Gm42569-201ENSMUST00000200539 472 ntBASIC18.23■□□□□ 0.51
Ighv1-43A0A0A6YXN5 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ighv1-43A0A0A6YXN5 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
Ighv1-43A0A0A6YXN5 Gm37035-201ENSMUST00000194809 2148 ntBASIC18.23■□□□□ 0.51
Ighv1-43A0A0A6YXN5 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Ighv1-43A0A0A6YXN5 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ighv1-43A0A0A6YXN5 Gm15043-201ENSMUST00000118843 1543 ntBASIC18.23■□□□□ 0.51
Ighv1-43A0A0A6YXN5 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ighv1-43A0A0A6YXN5 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
Ighv1-43A0A0A6YXN5 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Ighv1-43A0A0A6YXN5 Gm10849-201ENSMUST00000100397 618 ntBASIC18.22■□□□□ 0.51
Ighv1-43A0A0A6YXN5 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC18.22■□□□□ 0.51
Ighv1-43A0A0A6YXN5 Gm18671-201ENSMUST00000214826 683 ntBASIC18.22■□□□□ 0.51
Ighv1-43A0A0A6YXN5 AC164629.5-201ENSMUST00000220387 632 ntBASIC18.22■□□□□ 0.51
Ighv1-43A0A0A6YXN5 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Ighv1-43A0A0A6YXN5 Snhg20-203ENSMUST00000182811 2153 ntBASIC18.22■□□□□ 0.51
Ighv1-43A0A0A6YXN5 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Ighv1-43A0A0A6YXN5 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Ighv1-43A0A0A6YXN5 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
Ighv1-43A0A0A6YXN5 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Ighv1-43A0A0A6YXN5 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Ighv1-43A0A0A6YXN5 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC18.21■□□□□ 0.51
Ighv1-43A0A0A6YXN5 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Ighv1-43A0A0A6YXN5 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Ighv1-43A0A0A6YXN5 AC152827.1-201ENSMUST00000221143 2189 ntBASIC18.2■□□□□ 0.5
Ighv1-43A0A0A6YXN5 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Ighv1-43A0A0A6YXN5 Gm7291-201ENSMUST00000199147 382 ntBASIC18.2■□□□□ 0.5
Ighv1-43A0A0A6YXN5 Gm10033-202ENSMUST00000211874 928 ntBASIC18.2■□□□□ 0.5
Ighv1-43A0A0A6YXN5 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC18.2■□□□□ 0.5
Ighv1-43A0A0A6YXN5 Gm9988-201ENSMUST00000069786 435 ntBASIC18.2■□□□□ 0.5
Ighv1-43A0A0A6YXN5 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms