Protein–RNA interactions for Protein: A0A0A6YWV4

Trbc1, T cell receptor beta, constant region 1 (Fragment), mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbc1A0A0A6YWV4 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trbc1A0A0A6YWV4 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
Trbc1A0A0A6YWV4 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
Trbc1A0A0A6YWV4 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC18.08■□□□□ 0.49
Trbc1A0A0A6YWV4 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Trbc1A0A0A6YWV4 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Trbc1A0A0A6YWV4 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Trbc1A0A0A6YWV4 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
Trbc1A0A0A6YWV4 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
Trbc1A0A0A6YWV4 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
Trbc1A0A0A6YWV4 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Trbc1A0A0A6YWV4 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Trbc1A0A0A6YWV4 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Trbc1A0A0A6YWV4 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Trbc1A0A0A6YWV4 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Trbc1A0A0A6YWV4 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC18.08■□□□□ 0.48
Trbc1A0A0A6YWV4 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Trbc1A0A0A6YWV4 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trbc1A0A0A6YWV4 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
Trbc1A0A0A6YWV4 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
Trbc1A0A0A6YWV4 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trbc1A0A0A6YWV4 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
Trbc1A0A0A6YWV4 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Trbc1A0A0A6YWV4 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
Trbc1A0A0A6YWV4 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
Trbc1A0A0A6YWV4 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Trbc1A0A0A6YWV4 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trbc1A0A0A6YWV4 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Trbc1A0A0A6YWV4 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Trbc1A0A0A6YWV4 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Trbc1A0A0A6YWV4 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Trbc1A0A0A6YWV4 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Trbc1A0A0A6YWV4 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Trbc1A0A0A6YWV4 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC18.06■□□□□ 0.48
Trbc1A0A0A6YWV4 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Trbc1A0A0A6YWV4 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Trbc1A0A0A6YWV4 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Trbc1A0A0A6YWV4 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Trbc1A0A0A6YWV4 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trbc1A0A0A6YWV4 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trbc1A0A0A6YWV4 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trbc1A0A0A6YWV4 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
Trbc1A0A0A6YWV4 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
Trbc1A0A0A6YWV4 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trbc1A0A0A6YWV4 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC18.05■□□□□ 0.48
Trbc1A0A0A6YWV4 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trbc1A0A0A6YWV4 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trbc1A0A0A6YWV4 Gm27045-201ENSMUST00000182145 1402 ntBASIC18.05■□□□□ 0.48
Trbc1A0A0A6YWV4 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trbc1A0A0A6YWV4 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trbc1A0A0A6YWV4 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trbc1A0A0A6YWV4 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trbc1A0A0A6YWV4 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trbc1A0A0A6YWV4 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trbc1A0A0A6YWV4 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trbc1A0A0A6YWV4 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Trbc1A0A0A6YWV4 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trbc1A0A0A6YWV4 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Trbc1A0A0A6YWV4 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
Trbc1A0A0A6YWV4 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Trbc1A0A0A6YWV4 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC18.04■□□□□ 0.48
Trbc1A0A0A6YWV4 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trbc1A0A0A6YWV4 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC18.04■□□□□ 0.48
Trbc1A0A0A6YWV4 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trbc1A0A0A6YWV4 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC18.04■□□□□ 0.48
Trbc1A0A0A6YWV4 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trbc1A0A0A6YWV4 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trbc1A0A0A6YWV4 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trbc1A0A0A6YWV4 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
Trbc1A0A0A6YWV4 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trbc1A0A0A6YWV4 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trbc1A0A0A6YWV4 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trbc1A0A0A6YWV4 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Trbc1A0A0A6YWV4 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC18.03■□□□□ 0.48
Trbc1A0A0A6YWV4 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC18.03■□□□□ 0.48
Trbc1A0A0A6YWV4 Mir7075-201ENSMUST00000184187 82 ntBASIC18.03■□□□□ 0.48
Trbc1A0A0A6YWV4 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
Trbc1A0A0A6YWV4 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trbc1A0A0A6YWV4 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trbc1A0A0A6YWV4 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trbc1A0A0A6YWV4 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trbc1A0A0A6YWV4 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Trbc1A0A0A6YWV4 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Trbc1A0A0A6YWV4 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Trbc1A0A0A6YWV4 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Trbc1A0A0A6YWV4 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Trbc1A0A0A6YWV4 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Trbc1A0A0A6YWV4 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trbc1A0A0A6YWV4 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trbc1A0A0A6YWV4 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
Trbc1A0A0A6YWV4 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trbc1A0A0A6YWV4 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
Trbc1A0A0A6YWV4 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
Trbc1A0A0A6YWV4 Gm15039-201ENSMUST00000118914 875 ntBASIC18.01■□□□□ 0.47
Trbc1A0A0A6YWV4 Gm7160-202ENSMUST00000188519 1027 ntBASIC18.01■□□□□ 0.47
Trbc1A0A0A6YWV4 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trbc1A0A0A6YWV4 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trbc1A0A0A6YWV4 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trbc1A0A0A6YWV4 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trbc1A0A0A6YWV4 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 41.4 ms