Protein–RNA interactions for Protein: A0A0A6YW39

Ighv16-1, Immunoglobulin heavy variable 16-1 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv16-1A0A0A6YW39 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ighv16-1A0A0A6YW39 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ighv16-1A0A0A6YW39 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC18.23■□□□□ 0.51
Ighv16-1A0A0A6YW39 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Ighv16-1A0A0A6YW39 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Ighv16-1A0A0A6YW39 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Ighv16-1A0A0A6YW39 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Ighv16-1A0A0A6YW39 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Ighv16-1A0A0A6YW39 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Ighv16-1A0A0A6YW39 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
Ighv16-1A0A0A6YW39 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC18.22■□□□□ 0.51
Ighv16-1A0A0A6YW39 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Ighv16-1A0A0A6YW39 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC18.22■□□□□ 0.51
Ighv16-1A0A0A6YW39 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC18.22■□□□□ 0.51
Ighv16-1A0A0A6YW39 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
Ighv16-1A0A0A6YW39 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC18.22■□□□□ 0.51
Ighv16-1A0A0A6YW39 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC18.22■□□□□ 0.51
Ighv16-1A0A0A6YW39 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Ighv16-1A0A0A6YW39 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Ighv16-1A0A0A6YW39 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Ighv16-1A0A0A6YW39 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Ighv16-1A0A0A6YW39 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Ighv16-1A0A0A6YW39 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Ighv16-1A0A0A6YW39 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Ighv16-1A0A0A6YW39 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Ighv16-1A0A0A6YW39 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Ighv16-1A0A0A6YW39 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Ighv16-1A0A0A6YW39 Flvcr1-202ENSMUST00000191946 1216 ntBASIC18.21■□□□□ 0.51
Ighv16-1A0A0A6YW39 Hsf1-207ENSMUST00000228371 2102 ntBASIC18.21■□□□□ 0.51
Ighv16-1A0A0A6YW39 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Ighv16-1A0A0A6YW39 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC18.21■□□□□ 0.51
Ighv16-1A0A0A6YW39 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Ighv16-1A0A0A6YW39 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Ighv16-1A0A0A6YW39 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
Ighv16-1A0A0A6YW39 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Ighv16-1A0A0A6YW39 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
Ighv16-1A0A0A6YW39 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Ighv16-1A0A0A6YW39 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Ighv16-1A0A0A6YW39 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Ighv16-1A0A0A6YW39 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Ighv16-1A0A0A6YW39 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ighv16-1A0A0A6YW39 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Ighv16-1A0A0A6YW39 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ighv16-1A0A0A6YW39 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
Ighv16-1A0A0A6YW39 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC18.2■□□□□ 0.5
Ighv16-1A0A0A6YW39 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ighv16-1A0A0A6YW39 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ighv16-1A0A0A6YW39 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC18.2■□□□□ 0.5
Ighv16-1A0A0A6YW39 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC18.2■□□□□ 0.5
Ighv16-1A0A0A6YW39 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ighv16-1A0A0A6YW39 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ighv16-1A0A0A6YW39 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ighv16-1A0A0A6YW39 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ighv16-1A0A0A6YW39 Gm43017-201ENSMUST00000198296 752 ntBASIC18.19■□□□□ 0.5
Ighv16-1A0A0A6YW39 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ighv16-1A0A0A6YW39 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Ighv16-1A0A0A6YW39 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Ighv16-1A0A0A6YW39 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC18.19■□□□□ 0.5
Ighv16-1A0A0A6YW39 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ighv16-1A0A0A6YW39 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ighv16-1A0A0A6YW39 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ighv16-1A0A0A6YW39 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ighv16-1A0A0A6YW39 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Ighv16-1A0A0A6YW39 Gm43173-201ENSMUST00000202246 593 ntBASIC18.18■□□□□ 0.5
Ighv16-1A0A0A6YW39 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC18.18■□□□□ 0.5
Ighv16-1A0A0A6YW39 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Ighv16-1A0A0A6YW39 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC18.18■□□□□ 0.5
Ighv16-1A0A0A6YW39 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Ighv16-1A0A0A6YW39 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ighv16-1A0A0A6YW39 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Ighv16-1A0A0A6YW39 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ighv16-1A0A0A6YW39 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ighv16-1A0A0A6YW39 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ighv16-1A0A0A6YW39 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ighv16-1A0A0A6YW39 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC18.17■□□□□ 0.5
Ighv16-1A0A0A6YW39 Gm15039-201ENSMUST00000118914 875 ntBASIC18.17■□□□□ 0.5
Ighv16-1A0A0A6YW39 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Ighv16-1A0A0A6YW39 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ighv16-1A0A0A6YW39 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ighv16-1A0A0A6YW39 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ighv16-1A0A0A6YW39 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ighv16-1A0A0A6YW39 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Ighv16-1A0A0A6YW39 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
Ighv16-1A0A0A6YW39 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Ighv16-1A0A0A6YW39 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Ighv16-1A0A0A6YW39 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ighv16-1A0A0A6YW39 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ighv16-1A0A0A6YW39 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ighv16-1A0A0A6YW39 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ighv16-1A0A0A6YW39 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC18.16■□□□□ 0.5
Ighv16-1A0A0A6YW39 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ighv16-1A0A0A6YW39 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC18.16■□□□□ 0.5
Ighv16-1A0A0A6YW39 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Ighv16-1A0A0A6YW39 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ighv16-1A0A0A6YW39 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Ighv16-1A0A0A6YW39 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Ighv16-1A0A0A6YW39 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ighv16-1A0A0A6YW39 Cdkn3-203ENSMUST00000227149 1952 ntBASIC18.15■□□□□ 0.5
Ighv16-1A0A0A6YW39 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Ighv16-1A0A0A6YW39 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 17 ms