Protein–RNA interactions for Protein: A0A0A6YW38

Gm28870, Predicted gene 28870, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28870A0A0A6YW38 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Gm28870A0A0A6YW38 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Gm28870A0A0A6YW38 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Gm28870A0A0A6YW38 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC17.04■□□□□ 0.32
Gm28870A0A0A6YW38 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Gm28870A0A0A6YW38 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Gm28870A0A0A6YW38 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC17.04■□□□□ 0.32
Gm28870A0A0A6YW38 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Gm28870A0A0A6YW38 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Gm28870A0A0A6YW38 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Gm28870A0A0A6YW38 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Gm28870A0A0A6YW38 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Gm28870A0A0A6YW38 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
Gm28870A0A0A6YW38 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC17.04■□□□□ 0.32
Gm28870A0A0A6YW38 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Gm28870A0A0A6YW38 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Gm28870A0A0A6YW38 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Gm28870A0A0A6YW38 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Gm28870A0A0A6YW38 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Gm28870A0A0A6YW38 Gm16464-201ENSMUST00000117815 1095 ntBASIC17.03■□□□□ 0.32
Gm28870A0A0A6YW38 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Gm28870A0A0A6YW38 Gm45444-201ENSMUST00000211394 898 ntBASIC17.03■□□□□ 0.32
Gm28870A0A0A6YW38 Nsd1-203ENSMUST00000224156 1149 ntBASIC17.03■□□□□ 0.32
Gm28870A0A0A6YW38 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC17.03■□□□□ 0.32
Gm28870A0A0A6YW38 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Gm28870A0A0A6YW38 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Gm28870A0A0A6YW38 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC17.03■□□□□ 0.32
Gm28870A0A0A6YW38 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
Gm28870A0A0A6YW38 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Gm28870A0A0A6YW38 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Gm28870A0A0A6YW38 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
Gm28870A0A0A6YW38 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Gm28870A0A0A6YW38 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Gm28870A0A0A6YW38 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
Gm28870A0A0A6YW38 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Gm28870A0A0A6YW38 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Gm28870A0A0A6YW38 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Gm28870A0A0A6YW38 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Gm28870A0A0A6YW38 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Gm28870A0A0A6YW38 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Gm28870A0A0A6YW38 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
Gm28870A0A0A6YW38 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC17.02■□□□□ 0.31
Gm28870A0A0A6YW38 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Gm28870A0A0A6YW38 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Gm28870A0A0A6YW38 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Gm28870A0A0A6YW38 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
Gm28870A0A0A6YW38 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Gm28870A0A0A6YW38 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC17.01■□□□□ 0.31
Gm28870A0A0A6YW38 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Gm28870A0A0A6YW38 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Gm28870A0A0A6YW38 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Gm28870A0A0A6YW38 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Gm28870A0A0A6YW38 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Gm28870A0A0A6YW38 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Gm28870A0A0A6YW38 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Gm28870A0A0A6YW38 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Gm28870A0A0A6YW38 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC17■□□□□ 0.31
Gm28870A0A0A6YW38 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Gm28870A0A0A6YW38 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC17■□□□□ 0.31
Gm28870A0A0A6YW38 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC17■□□□□ 0.31
Gm28870A0A0A6YW38 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC17■□□□□ 0.31
Gm28870A0A0A6YW38 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC17■□□□□ 0.31
Gm28870A0A0A6YW38 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC17■□□□□ 0.31
Gm28870A0A0A6YW38 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC17■□□□□ 0.31
Gm28870A0A0A6YW38 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC17■□□□□ 0.31
Gm28870A0A0A6YW38 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC17■□□□□ 0.31
Gm28870A0A0A6YW38 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC17■□□□□ 0.31
Gm28870A0A0A6YW38 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Gm28870A0A0A6YW38 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Gm28870A0A0A6YW38 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Gm28870A0A0A6YW38 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Gm28870A0A0A6YW38 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
Gm28870A0A0A6YW38 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Gm28870A0A0A6YW38 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
Gm28870A0A0A6YW38 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Gm28870A0A0A6YW38 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
Gm28870A0A0A6YW38 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Gm28870A0A0A6YW38 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Gm28870A0A0A6YW38 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Gm28870A0A0A6YW38 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Gm28870A0A0A6YW38 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
Gm28870A0A0A6YW38 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Gm28870A0A0A6YW38 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Gm28870A0A0A6YW38 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Gm28870A0A0A6YW38 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Gm28870A0A0A6YW38 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Gm28870A0A0A6YW38 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
Gm28870A0A0A6YW38 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Gm28870A0A0A6YW38 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC16.98■□□□□ 0.31
Gm28870A0A0A6YW38 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC16.98■□□□□ 0.31
Gm28870A0A0A6YW38 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Gm28870A0A0A6YW38 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Gm28870A0A0A6YW38 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Gm28870A0A0A6YW38 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Gm28870A0A0A6YW38 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Gm28870A0A0A6YW38 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Gm28870A0A0A6YW38 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Gm28870A0A0A6YW38 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Gm28870A0A0A6YW38 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC16.97■□□□□ 0.31
Gm28870A0A0A6YW38 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 61.5 ms