Protein–RNA interactions for Protein: A0A075B6C2

Trav13-4-dv7, T cell receptor alpha variable 13-4-DV7 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13-4-dv7A0A075B6C2 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Trav13-4-dv7A0A075B6C2 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Trav13-4-dv7A0A075B6C2 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav13-4-dv7A0A075B6C2 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav13-4-dv7A0A075B6C2 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Trav13-4-dv7A0A075B6C2 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Trav13-4-dv7A0A075B6C2 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav13-4-dv7A0A075B6C2 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav13-4-dv7A0A075B6C2 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav13-4-dv7A0A075B6C2 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav13-4-dv7A0A075B6C2 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav13-4-dv7A0A075B6C2 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav13-4-dv7A0A075B6C2 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav13-4-dv7A0A075B6C2 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav13-4-dv7A0A075B6C2 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav13-4-dv7A0A075B6C2 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Trav13-4-dv7A0A075B6C2 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav13-4-dv7A0A075B6C2 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Trav13-4-dv7A0A075B6C2 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Trav13-4-dv7A0A075B6C2 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC13.56□□□□□ -0.24
Trav13-4-dv7A0A075B6C2 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav13-4-dv7A0A075B6C2 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
Trav13-4-dv7A0A075B6C2 Gm16464-201ENSMUST00000117815 1095 ntBASIC13.56□□□□□ -0.24
Trav13-4-dv7A0A075B6C2 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Trav13-4-dv7A0A075B6C2 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC13.56□□□□□ -0.24
Trav13-4-dv7A0A075B6C2 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav13-4-dv7A0A075B6C2 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav13-4-dv7A0A075B6C2 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Trav13-4-dv7A0A075B6C2 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav13-4-dv7A0A075B6C2 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav13-4-dv7A0A075B6C2 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav13-4-dv7A0A075B6C2 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Trav13-4-dv7A0A075B6C2 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav13-4-dv7A0A075B6C2 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
Trav13-4-dv7A0A075B6C2 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav13-4-dv7A0A075B6C2 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav13-4-dv7A0A075B6C2 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Trav13-4-dv7A0A075B6C2 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav13-4-dv7A0A075B6C2 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav13-4-dv7A0A075B6C2 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Trav13-4-dv7A0A075B6C2 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC13.55□□□□□ -0.24
Trav13-4-dv7A0A075B6C2 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC13.55□□□□□ -0.24
Trav13-4-dv7A0A075B6C2 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav13-4-dv7A0A075B6C2 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav13-4-dv7A0A075B6C2 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Trav13-4-dv7A0A075B6C2 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav13-4-dv7A0A075B6C2 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav13-4-dv7A0A075B6C2 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC13.55□□□□□ -0.24
Trav13-4-dv7A0A075B6C2 Gm43909-201ENSMUST00000203443 1876 ntBASIC13.55□□□□□ -0.24
Trav13-4-dv7A0A075B6C2 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav13-4-dv7A0A075B6C2 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
Trav13-4-dv7A0A075B6C2 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav13-4-dv7A0A075B6C2 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav13-4-dv7A0A075B6C2 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Trav13-4-dv7A0A075B6C2 Gm45444-201ENSMUST00000211394 898 ntBASIC13.54□□□□□ -0.24
Trav13-4-dv7A0A075B6C2 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav13-4-dv7A0A075B6C2 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav13-4-dv7A0A075B6C2 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC13.54□□□□□ -0.24
Trav13-4-dv7A0A075B6C2 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav13-4-dv7A0A075B6C2 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav13-4-dv7A0A075B6C2 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav13-4-dv7A0A075B6C2 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Trav13-4-dv7A0A075B6C2 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav13-4-dv7A0A075B6C2 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC13.53□□□□□ -0.24
Trav13-4-dv7A0A075B6C2 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav13-4-dv7A0A075B6C2 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC13.53□□□□□ -0.24
Trav13-4-dv7A0A075B6C2 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav13-4-dv7A0A075B6C2 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav13-4-dv7A0A075B6C2 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC13.53□□□□□ -0.24
Trav13-4-dv7A0A075B6C2 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav13-4-dv7A0A075B6C2 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav13-4-dv7A0A075B6C2 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC13.53□□□□□ -0.24
Trav13-4-dv7A0A075B6C2 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC13.53□□□□□ -0.24
Trav13-4-dv7A0A075B6C2 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Trav13-4-dv7A0A075B6C2 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC13.53□□□□□ -0.24
Trav13-4-dv7A0A075B6C2 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC13.53□□□□□ -0.24
Trav13-4-dv7A0A075B6C2 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Trav13-4-dv7A0A075B6C2 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav13-4-dv7A0A075B6C2 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav13-4-dv7A0A075B6C2 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav13-4-dv7A0A075B6C2 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Trav13-4-dv7A0A075B6C2 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Trav13-4-dv7A0A075B6C2 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Trav13-4-dv7A0A075B6C2 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Trav13-4-dv7A0A075B6C2 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Trav13-4-dv7A0A075B6C2 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Trav13-4-dv7A0A075B6C2 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC13.52□□□□□ -0.24
Trav13-4-dv7A0A075B6C2 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Trav13-4-dv7A0A075B6C2 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC13.52□□□□□ -0.25
Trav13-4-dv7A0A075B6C2 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav13-4-dv7A0A075B6C2 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav13-4-dv7A0A075B6C2 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav13-4-dv7A0A075B6C2 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav13-4-dv7A0A075B6C2 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Trav13-4-dv7A0A075B6C2 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav13-4-dv7A0A075B6C2 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav13-4-dv7A0A075B6C2 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav13-4-dv7A0A075B6C2 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav13-4-dv7A0A075B6C2 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav13-4-dv7A0A075B6C2 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms