Protein–RNA interactions for Protein: A0A075B6B2

Trav6n-6, T cell receptor alpha variable 6N-6 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6n-6A0A075B6B2 Gm5913-201ENSMUST00000119397 1399 ntBASIC14.61□□□□□ -0.07
Trav6n-6A0A075B6B2 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav6n-6A0A075B6B2 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav6n-6A0A075B6B2 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav6n-6A0A075B6B2 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav6n-6A0A075B6B2 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Trav6n-6A0A075B6B2 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Trav6n-6A0A075B6B2 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav6n-6A0A075B6B2 Gm10399-202ENSMUST00000202768 748 ntBASIC14.61□□□□□ -0.07
Trav6n-6A0A075B6B2 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav6n-6A0A075B6B2 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav6n-6A0A075B6B2 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Trav6n-6A0A075B6B2 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav6n-6A0A075B6B2 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Trav6n-6A0A075B6B2 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Trav6n-6A0A075B6B2 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav6n-6A0A075B6B2 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav6n-6A0A075B6B2 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav6n-6A0A075B6B2 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC14.6□□□□□ -0.07
Trav6n-6A0A075B6B2 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav6n-6A0A075B6B2 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav6n-6A0A075B6B2 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Trav6n-6A0A075B6B2 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav6n-6A0A075B6B2 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav6n-6A0A075B6B2 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav6n-6A0A075B6B2 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
Trav6n-6A0A075B6B2 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
Trav6n-6A0A075B6B2 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav6n-6A0A075B6B2 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav6n-6A0A075B6B2 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav6n-6A0A075B6B2 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav6n-6A0A075B6B2 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
Trav6n-6A0A075B6B2 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav6n-6A0A075B6B2 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC14.6□□□□□ -0.07
Trav6n-6A0A075B6B2 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav6n-6A0A075B6B2 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC14.6□□□□□ -0.07
Trav6n-6A0A075B6B2 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC14.6□□□□□ -0.07
Trav6n-6A0A075B6B2 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav6n-6A0A075B6B2 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Trav6n-6A0A075B6B2 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav6n-6A0A075B6B2 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav6n-6A0A075B6B2 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav6n-6A0A075B6B2 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav6n-6A0A075B6B2 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav6n-6A0A075B6B2 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav6n-6A0A075B6B2 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav6n-6A0A075B6B2 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav6n-6A0A075B6B2 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC14.59□□□□□ -0.07
Trav6n-6A0A075B6B2 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC14.59□□□□□ -0.07
Trav6n-6A0A075B6B2 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav6n-6A0A075B6B2 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav6n-6A0A075B6B2 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav6n-6A0A075B6B2 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC14.59□□□□□ -0.07
Trav6n-6A0A075B6B2 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Trav6n-6A0A075B6B2 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Trav6n-6A0A075B6B2 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.07
Trav6n-6A0A075B6B2 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Trav6n-6A0A075B6B2 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav6n-6A0A075B6B2 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav6n-6A0A075B6B2 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav6n-6A0A075B6B2 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Trav6n-6A0A075B6B2 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav6n-6A0A075B6B2 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC14.58□□□□□ -0.08
Trav6n-6A0A075B6B2 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav6n-6A0A075B6B2 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav6n-6A0A075B6B2 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav6n-6A0A075B6B2 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav6n-6A0A075B6B2 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav6n-6A0A075B6B2 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC14.58□□□□□ -0.08
Trav6n-6A0A075B6B2 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav6n-6A0A075B6B2 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav6n-6A0A075B6B2 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC14.57□□□□□ -0.08
Trav6n-6A0A075B6B2 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav6n-6A0A075B6B2 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC14.57□□□□□ -0.08
Trav6n-6A0A075B6B2 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav6n-6A0A075B6B2 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav6n-6A0A075B6B2 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav6n-6A0A075B6B2 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC14.57□□□□□ -0.08
Trav6n-6A0A075B6B2 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav6n-6A0A075B6B2 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav6n-6A0A075B6B2 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav6n-6A0A075B6B2 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Trav6n-6A0A075B6B2 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav6n-6A0A075B6B2 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC14.56□□□□□ -0.08
Trav6n-6A0A075B6B2 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC14.56□□□□□ -0.08
Trav6n-6A0A075B6B2 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav6n-6A0A075B6B2 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Trav6n-6A0A075B6B2 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC14.56□□□□□ -0.08
Trav6n-6A0A075B6B2 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC14.56□□□□□ -0.08
Trav6n-6A0A075B6B2 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav6n-6A0A075B6B2 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Trav6n-6A0A075B6B2 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav6n-6A0A075B6B2 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Trav6n-6A0A075B6B2 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC14.56□□□□□ -0.08
Trav6n-6A0A075B6B2 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Trav6n-6A0A075B6B2 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC14.56□□□□□ -0.08
Trav6n-6A0A075B6B2 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav6n-6A0A075B6B2 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav6n-6A0A075B6B2 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav6n-6A0A075B6B2 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 12.2 ms