Protein–RNA interactions for Protein: A0A075B656

Trav18, T cell receptor alpha variable 18 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav18A0A075B656 Gm42501-201ENSMUST00000200220 1026 ntBASIC16.14■□□□□ 0.17
Trav18A0A075B656 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trav18A0A075B656 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Trav18A0A075B656 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC16.14■□□□□ 0.17
Trav18A0A075B656 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trav18A0A075B656 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trav18A0A075B656 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Trav18A0A075B656 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trav18A0A075B656 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
Trav18A0A075B656 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Trav18A0A075B656 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trav18A0A075B656 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC16.13■□□□□ 0.17
Trav18A0A075B656 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Trav18A0A075B656 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC16.13■□□□□ 0.17
Trav18A0A075B656 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trav18A0A075B656 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC16.13■□□□□ 0.17
Trav18A0A075B656 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trav18A0A075B656 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trav18A0A075B656 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trav18A0A075B656 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Trav18A0A075B656 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Trav18A0A075B656 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trav18A0A075B656 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Trav18A0A075B656 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC16.12■□□□□ 0.17
Trav18A0A075B656 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
Trav18A0A075B656 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC16.12■□□□□ 0.17
Trav18A0A075B656 Cdkn3-203ENSMUST00000227149 1952 ntBASIC16.12■□□□□ 0.17
Trav18A0A075B656 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC16.12■□□□□ 0.17
Trav18A0A075B656 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trav18A0A075B656 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Trav18A0A075B656 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trav18A0A075B656 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC16.12■□□□□ 0.17
Trav18A0A075B656 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trav18A0A075B656 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trav18A0A075B656 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Trav18A0A075B656 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trav18A0A075B656 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trav18A0A075B656 Gm10657-201ENSMUST00000193528 1031 ntBASIC16.11■□□□□ 0.17
Trav18A0A075B656 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Trav18A0A075B656 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trav18A0A075B656 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
Trav18A0A075B656 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
Trav18A0A075B656 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trav18A0A075B656 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC16.11■□□□□ 0.17
Trav18A0A075B656 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trav18A0A075B656 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trav18A0A075B656 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trav18A0A075B656 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
Trav18A0A075B656 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Trav18A0A075B656 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trav18A0A075B656 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Trav18A0A075B656 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Trav18A0A075B656 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trav18A0A075B656 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trav18A0A075B656 Gm7417-201ENSMUST00000192950 473 ntBASIC16.1■□□□□ 0.17
Trav18A0A075B656 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trav18A0A075B656 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trav18A0A075B656 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trav18A0A075B656 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trav18A0A075B656 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trav18A0A075B656 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trav18A0A075B656 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trav18A0A075B656 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Trav18A0A075B656 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC16.09■□□□□ 0.17
Trav18A0A075B656 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Trav18A0A075B656 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trav18A0A075B656 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Trav18A0A075B656 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC16.09■□□□□ 0.17
Trav18A0A075B656 Gm5812-201ENSMUST00000061073 957 ntBASIC16.09■□□□□ 0.17
Trav18A0A075B656 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trav18A0A075B656 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Trav18A0A075B656 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trav18A0A075B656 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trav18A0A075B656 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Trav18A0A075B656 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trav18A0A075B656 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC16.08■□□□□ 0.16
Trav18A0A075B656 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trav18A0A075B656 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trav18A0A075B656 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Trav18A0A075B656 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
Trav18A0A075B656 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
Trav18A0A075B656 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trav18A0A075B656 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trav18A0A075B656 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC16.08■□□□□ 0.16
Trav18A0A075B656 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trav18A0A075B656 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trav18A0A075B656 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trav18A0A075B656 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC16.07■□□□□ 0.16
Trav18A0A075B656 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trav18A0A075B656 Etf1-202ENSMUST00000180351 108 ntBASIC16.07■□□□□ 0.16
Trav18A0A075B656 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trav18A0A075B656 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
Trav18A0A075B656 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trav18A0A075B656 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trav18A0A075B656 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Trav18A0A075B656 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Trav18A0A075B656 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Trav18A0A075B656 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trav18A0A075B656 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
Trav18A0A075B656 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 122.9 ms