Protein–RNA interactions for Protein: A0A075B603

Trav6-6, T cell receptor alpha variable 6-6 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-6A0A075B603 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav6-6A0A075B603 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC14.65□□□□□ -0.06
Trav6-6A0A075B603 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav6-6A0A075B603 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav6-6A0A075B603 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
Trav6-6A0A075B603 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav6-6A0A075B603 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
Trav6-6A0A075B603 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav6-6A0A075B603 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Trav6-6A0A075B603 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav6-6A0A075B603 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav6-6A0A075B603 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Trav6-6A0A075B603 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC14.65□□□□□ -0.06
Trav6-6A0A075B603 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Trav6-6A0A075B603 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.07
Trav6-6A0A075B603 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav6-6A0A075B603 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav6-6A0A075B603 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav6-6A0A075B603 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav6-6A0A075B603 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC14.64□□□□□ -0.07
Trav6-6A0A075B603 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC14.64□□□□□ -0.07
Trav6-6A0A075B603 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC14.64□□□□□ -0.07
Trav6-6A0A075B603 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav6-6A0A075B603 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav6-6A0A075B603 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Trav6-6A0A075B603 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav6-6A0A075B603 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC14.63□□□□□ -0.07
Trav6-6A0A075B603 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav6-6A0A075B603 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
Trav6-6A0A075B603 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC14.63□□□□□ -0.07
Trav6-6A0A075B603 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC14.63□□□□□ -0.07
Trav6-6A0A075B603 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav6-6A0A075B603 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC14.63□□□□□ -0.07
Trav6-6A0A075B603 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav6-6A0A075B603 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav6-6A0A075B603 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
Trav6-6A0A075B603 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav6-6A0A075B603 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav6-6A0A075B603 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Trav6-6A0A075B603 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav6-6A0A075B603 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav6-6A0A075B603 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav6-6A0A075B603 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav6-6A0A075B603 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC14.62□□□□□ -0.07
Trav6-6A0A075B603 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav6-6A0A075B603 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav6-6A0A075B603 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav6-6A0A075B603 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Trav6-6A0A075B603 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav6-6A0A075B603 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC14.62□□□□□ -0.07
Trav6-6A0A075B603 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC14.62□□□□□ -0.07
Trav6-6A0A075B603 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav6-6A0A075B603 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav6-6A0A075B603 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC14.62□□□□□ -0.07
Trav6-6A0A075B603 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC14.62□□□□□ -0.07
Trav6-6A0A075B603 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
Trav6-6A0A075B603 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC14.61□□□□□ -0.07
Trav6-6A0A075B603 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC14.61□□□□□ -0.07
Trav6-6A0A075B603 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav6-6A0A075B603 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav6-6A0A075B603 Gm5921-201ENSMUST00000075898 882 ntBASIC14.61□□□□□ -0.07
Trav6-6A0A075B603 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC14.61□□□□□ -0.07
Trav6-6A0A075B603 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav6-6A0A075B603 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav6-6A0A075B603 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav6-6A0A075B603 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav6-6A0A075B603 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Trav6-6A0A075B603 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Trav6-6A0A075B603 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav6-6A0A075B603 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
Trav6-6A0A075B603 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav6-6A0A075B603 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC14.6□□□□□ -0.07
Trav6-6A0A075B603 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav6-6A0A075B603 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC14.6□□□□□ -0.07
Trav6-6A0A075B603 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav6-6A0A075B603 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav6-6A0A075B603 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC14.6□□□□□ -0.07
Trav6-6A0A075B603 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav6-6A0A075B603 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC14.6□□□□□ -0.07
Trav6-6A0A075B603 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Trav6-6A0A075B603 Gm43566-201ENSMUST00000196851 808 ntBASIC14.6□□□□□ -0.07
Trav6-6A0A075B603 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
Trav6-6A0A075B603 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav6-6A0A075B603 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav6-6A0A075B603 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav6-6A0A075B603 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC14.6□□□□□ -0.07
Trav6-6A0A075B603 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav6-6A0A075B603 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav6-6A0A075B603 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav6-6A0A075B603 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC14.6□□□□□ -0.07
Trav6-6A0A075B603 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC14.6□□□□□ -0.07
Trav6-6A0A075B603 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav6-6A0A075B603 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav6-6A0A075B603 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav6-6A0A075B603 Gm5540-201ENSMUST00000131852 1848 ntBASIC14.59□□□□□ -0.07
Trav6-6A0A075B603 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav6-6A0A075B603 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav6-6A0A075B603 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav6-6A0A075B603 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC14.59□□□□□ -0.07
Trav6-6A0A075B603 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 19.5 ms