Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 Gm23745-201ENSMUST00000104230 125 ntBASIC10.51□□□□□ -0.73
Trub1Q8C0D0 Cryzl1-202ENSMUST00000114023 1154 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trub1Q8C0D0 Gm12028-201ENSMUST00000118065 436 ntBASIC10.51□□□□□ -0.73
Trub1Q8C0D0 Gm13549-201ENSMUST00000118339 796 ntBASIC10.51□□□□□ -0.73
Trub1Q8C0D0 Gm13792-201ENSMUST00000121350 423 ntBASIC10.51□□□□□ -0.73
Trub1Q8C0D0 Gm11675-201ENSMUST00000121873 832 ntBASIC10.51□□□□□ -0.73
Trub1Q8C0D0 Gm16397-201ENSMUST00000122201 494 ntBASIC10.51□□□□□ -0.73
Trub1Q8C0D0 Cryzl1-206ENSMUST00000124282 1187 ntTSL 5 BASIC10.51□□□□□ -0.73
Trub1Q8C0D0 Gm15409-201ENSMUST00000135240 520 ntTSL 2 BASIC10.51□□□□□ -0.73
Trub1Q8C0D0 Eif4e1b-210ENSMUST00000152204 859 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Trub1Q8C0D0 Gm14341-201ENSMUST00000154616 667 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Trub1Q8C0D0 Gal3st2b-201ENSMUST00000177958 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trub1Q8C0D0 Gm27241-201ENSMUST00000183517 622 ntTSL 3 BASIC10.51□□□□□ -0.73
Trub1Q8C0D0 Rpl15-ps2-201ENSMUST00000184247 613 ntBASIC10.51□□□□□ -0.73
Trub1Q8C0D0 1700009J07Rik-202ENSMUST00000185309 920 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Trub1Q8C0D0 1700019D03Rik-206ENSMUST00000190831 653 ntAPPRIS P1 TSL 2 BASIC10.51□□□□□ -0.73
Trub1Q8C0D0 Gm7445-201ENSMUST00000192115 340 ntBASIC10.51□□□□□ -0.73
Trub1Q8C0D0 Gm37944-201ENSMUST00000194233 414 ntBASIC10.51□□□□□ -0.73
Trub1Q8C0D0 Wbp1-209ENSMUST00000205023 716 ntBASIC10.51□□□□□ -0.73
Trub1Q8C0D0 Gm34655-202ENSMUST00000215259 877 ntTSL 3 BASIC10.51□□□□□ -0.73
Trub1Q8C0D0 Gpr137b-ps-202ENSMUST00000220647 1159 ntBASIC10.51□□□□□ -0.73
Trub1Q8C0D0 4933407L21Rik-201ENSMUST00000027426 1146 ntAPPRIS P5 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trub1Q8C0D0 Haao-201ENSMUST00000000687 1222 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trub1Q8C0D0 Olfr1229-201ENSMUST00000099788 1019 ntAPPRIS P1 BASIC10.51□□□□□ -0.73
Trub1Q8C0D0 Daam2-201ENSMUST00000057610 3646 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trub1Q8C0D0 Nudcd3-201ENSMUST00000066496 3927 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trub1Q8C0D0 Nfyc-204ENSMUST00000120779 2006 ntAPPRIS P1 TSL 5 BASIC10.51□□□□□ -0.73
Trub1Q8C0D0 Dnmt1-202ENSMUST00000177754 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trub1Q8C0D0 Zfp54-201ENSMUST00000007884 2300 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trub1Q8C0D0 Il6st-210ENSMUST00000184949 2571 ntAPPRIS ALT2 TSL 5 BASIC10.51□□□□□ -0.73
Trub1Q8C0D0 Pofut1-207ENSMUST00000152390 4833 ntTSL 2 BASIC10.51□□□□□ -0.73
Trub1Q8C0D0 Npnt-205ENSMUST00000117456 3383 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Trub1Q8C0D0 Gm42432-201ENSMUST00000197902 1617 ntBASIC10.51□□□□□ -0.73
Trub1Q8C0D0 AC154197.1-201ENSMUST00000225136 1382 ntBASIC10.51□□□□□ -0.73
Trub1Q8C0D0 Slc40a1-201ENSMUST00000027137 3370 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trub1Q8C0D0 Crx-201ENSMUST00000044434 2919 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trub1Q8C0D0 G6pc-201ENSMUST00000019469 2414 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Trub1Q8C0D0 Cdh8-205ENSMUST00000142475 3216 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Trub1Q8C0D0 Spg20-203ENSMUST00000117341 2957 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Trub1Q8C0D0 Zbtb25-202ENSMUST00000176102 2707 ntAPPRIS P1 TSL 5 BASIC10.5□□□□□ -0.73
Trub1Q8C0D0 Sqor-202ENSMUST00000110506 1985 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Trub1Q8C0D0 CT025645.2-201ENSMUST00000223278 3827 ntBASIC10.5□□□□□ -0.73
Trub1Q8C0D0 Tbck-202ENSMUST00000169172 6578 ntAPPRIS P1 TSL 5 BASIC10.5□□□□□ -0.73
Trub1Q8C0D0 Esr2-202ENSMUST00000101291 3362 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Trub1Q8C0D0 Zfp940-202ENSMUST00000108223 2560 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Trub1Q8C0D0 Zfp384-201ENSMUST00000046064 3108 ntTSL 5 BASIC10.5□□□□□ -0.73
Trub1Q8C0D0 Clock-201ENSMUST00000075159 7478 ntAPPRIS P3 TSL 1 (best) BASIC10.5□□□□□ -0.73
Trub1Q8C0D0 Gm36426-201ENSMUST00000222903 1795 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Trub1Q8C0D0 Fut10-201ENSMUST00000066173 3183 ntAPPRIS P3 TSL 1 (best) BASIC10.5□□□□□ -0.73
Trub1Q8C0D0 Gm28693-201ENSMUST00000189622 2638 ntBASIC10.5□□□□□ -0.73
Trub1Q8C0D0 Gm15535-202ENSMUST00000148478 1519 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Trub1Q8C0D0 Gm7356-201ENSMUST00000186636 1527 ntAPPRIS P1 BASIC10.5□□□□□ -0.73
Trub1Q8C0D0 Gm7358-201ENSMUST00000189454 1527 ntBASIC10.5□□□□□ -0.73
Trub1Q8C0D0 Slc7a3-202ENSMUST00000101362 2371 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Trub1Q8C0D0 Zbtb21-203ENSMUST00000113734 6010 ntAPPRIS P4 TSL 2 BASIC10.5□□□□□ -0.73
Trub1Q8C0D0 Uqcc1-202ENSMUST00000109631 1091 ntAPPRIS ALT2 TSL 5 BASIC10.5□□□□□ -0.73
Trub1Q8C0D0 Gm21987-201ENSMUST00000119704 456 ntAPPRIS P1 TSL 2 BASIC10.5□□□□□ -0.73
Trub1Q8C0D0 Pradc1-204ENSMUST00000126805 953 ntTSL 2 BASIC10.5□□□□□ -0.73
Trub1Q8C0D0 Gm12606-202ENSMUST00000129527 1184 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Trub1Q8C0D0 Gm12326-201ENSMUST00000132986 618 ntTSL 5 BASIC10.5□□□□□ -0.73
Trub1Q8C0D0 Gm11513-201ENSMUST00000138855 751 ntTSL 5 BASIC10.5□□□□□ -0.73
Trub1Q8C0D0 Pla2g1b-204ENSMUST00000145785 419 ntTSL 5 BASIC10.5□□□□□ -0.73
Trub1Q8C0D0 Ube2i-214ENSMUST00000174216 1144 ntTSL 2 BASIC10.5□□□□□ -0.73
Trub1Q8C0D0 Gm25677-201ENSMUST00000174983 72 ntBASIC10.5□□□□□ -0.73
Trub1Q8C0D0 Gm5808-201ENSMUST00000178090 357 ntBASIC10.5□□□□□ -0.73
Trub1Q8C0D0 Gm28179-201ENSMUST00000188365 613 ntBASIC10.5□□□□□ -0.73
Trub1Q8C0D0 Gm28079-206ENSMUST00000188554 1170 ntAPPRIS P1 TSL 5 BASIC10.5□□□□□ -0.73
Trub1Q8C0D0 Lsm8-204ENSMUST00000201141 503 ntTSL 3 BASIC10.5□□□□□ -0.73
Trub1Q8C0D0 Gm5650-201ENSMUST00000209641 598 ntBASIC10.5□□□□□ -0.73
Trub1Q8C0D0 AC140381.2-201ENSMUST00000217935 1260 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Trub1Q8C0D0 Ppm1a-205ENSMUST00000222896 1103 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Trub1Q8C0D0 CT025689.5-201ENSMUST00000224316 986 ntBASIC10.5□□□□□ -0.73
Trub1Q8C0D0 Olfr709-ps1-201ENSMUST00000072368 924 ntAPPRIS P1 BASIC10.5□□□□□ -0.73
Trub1Q8C0D0 Vmn1r192-201ENSMUST00000072632 1067 ntAPPRIS P1 BASIC10.5□□□□□ -0.73
Trub1Q8C0D0 Olfr1328-201ENSMUST00000081960 944 ntAPPRIS P2 BASIC10.5□□□□□ -0.73
Trub1Q8C0D0 Mre11a-201ENSMUST00000034405 3286 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Trub1Q8C0D0 Nt5c1b-203ENSMUST00000143739 1570 ntTSL 2 BASIC10.5□□□□□ -0.73
Trub1Q8C0D0 Wdr20rt-202ENSMUST00000221658 1570 ntTSL 5 BASIC10.5□□□□□ -0.73
Trub1Q8C0D0 Drc3-203ENSMUST00000108722 1858 ntAPPRIS ALT2 TSL 5 BASIC10.5□□□□□ -0.73
Trub1Q8C0D0 Zfp827-203ENSMUST00000119254 4549 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Trub1Q8C0D0 Rrm2b-201ENSMUST00000022901 4561 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Trub1Q8C0D0 Gm7823-201ENSMUST00000120761 1623 ntBASIC10.5□□□□□ -0.73
Trub1Q8C0D0 Slc35a4-206ENSMUST00000186538 2842 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Trub1Q8C0D0 Ighmbp2-201ENSMUST00000025751 3720 ntAPPRIS P2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Trub1Q8C0D0 Slc28a1-202ENSMUST00000119083 2899 ntAPPRIS P1 TSL 5 BASIC10.5□□□□□ -0.73
Trub1Q8C0D0 4833420G17Rik-201ENSMUST00000026519 2565 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Trub1Q8C0D0 Gm37333-201ENSMUST00000192904 2251 ntBASIC10.5□□□□□ -0.73
Trub1Q8C0D0 Gm46218-202ENSMUST00000215520 1956 ntBASIC10.5□□□□□ -0.73
Trub1Q8C0D0 AI593442-201ENSMUST00000098768 5615 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Trub1Q8C0D0 Gm13920-201ENSMUST00000146134 1663 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Trub1Q8C0D0 B430203G13Rik-201ENSMUST00000169657 1375 ntBASIC10.5□□□□□ -0.73
Trub1Q8C0D0 Pex3-207ENSMUST00000170376 1381 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Trub1Q8C0D0 Sfi1-203ENSMUST00000101655 3888 ntAPPRIS ALT2 TSL 5 BASIC10.5□□□□□ -0.73
Trub1Q8C0D0 Spef2-203ENSMUST00000159368 1422 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Trub1Q8C0D0 Tomm20-201ENSMUST00000179857 4902 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Trub1Q8C0D0 Mllt10-201ENSMUST00000028076 4917 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Trub1Q8C0D0 Diaph1-201ENSMUST00000025337 5596 ntAPPRIS ALT2 TSL 5 BASIC10.5□□□□□ -0.73
Trub1Q8C0D0 Cox17-202ENSMUST00000120495 3690 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Trub1Q8C0D0 Ap5z1-201ENSMUST00000038699 3689 ntAPPRIS P2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Trub1Q8C0D0 Pdlim5-204ENSMUST00000168967 1755 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 53.3 ms