Protein–RNA interactions for Protein: Q3UHA3

Spg11, Spatacsin, mousemouse

Predictions only

Length 2,430 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Spg11Q3UHA3 Rab3gap1-207ENSMUST00000212506 2967 ntAPPRIS ALT2 TSL 5 BASIC9.43□□□□□ -0.9
Spg11Q3UHA3 Tmcc2-201ENSMUST00000045473 3410 ntAPPRIS P3 TSL 1 (best) BASIC9.43□□□□□ -0.9
Spg11Q3UHA3 Gm20696-201ENSMUST00000155466 3560 ntAPPRIS P1 TSL 2 BASIC9.43□□□□□ -0.9
Spg11Q3UHA3 Zhx2-201ENSMUST00000096430 4376 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Spg11Q3UHA3 Gm27177-202ENSMUST00000183514 2703 ntBASIC9.43□□□□□ -0.9
Spg11Q3UHA3 Kif2a-206ENSMUST00000159772 2570 ntTSL 5 BASIC9.43□□□□□ -0.9
Spg11Q3UHA3 Umod-206ENSMUST00000209095 2571 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Spg11Q3UHA3 Ephx1-202ENSMUST00000111068 1699 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Spg11Q3UHA3 Khdrbs2-204ENSMUST00000188257 5278 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Spg11Q3UHA3 Tinf2-201ENSMUST00000007733 2956 ntAPPRIS P2 TSL 1 (best) BASIC9.43□□□□□ -0.9
Spg11Q3UHA3 Pgf-201ENSMUST00000004913 1582 ntAPPRIS P2 TSL 1 (best) BASIC9.43□□□□□ -0.9
Spg11Q3UHA3 Eda2r-202ENSMUST00000113832 1433 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Spg11Q3UHA3 Gm4405-201ENSMUST00000106038 982 ntBASIC9.43□□□□□ -0.9
Spg11Q3UHA3 Sat2-202ENSMUST00000108656 968 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Spg11Q3UHA3 Gm14663-201ENSMUST00000118474 1153 ntBASIC9.43□□□□□ -0.9
Spg11Q3UHA3 Mrgpra2b-201ENSMUST00000119798 1265 ntAPPRIS P2 TSL 1 (best) BASIC9.43□□□□□ -0.9
Spg11Q3UHA3 Gm11947-201ENSMUST00000125275 273 ntTSL 3 BASIC9.43□□□□□ -0.9
Spg11Q3UHA3 1700031F10Rik-202ENSMUST00000156018 609 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Spg11Q3UHA3 Gm13017-201ENSMUST00000156409 400 ntTSL 3 BASIC9.43□□□□□ -0.9
Spg11Q3UHA3 BC048671-202ENSMUST00000167550 890 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Spg11Q3UHA3 2410141K09Rik-204ENSMUST00000173583 515 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Spg11Q3UHA3 Gm38134-201ENSMUST00000191858 1234 ntTSL 5 BASIC9.43□□□□□ -0.9
Spg11Q3UHA3 Cryaa-206ENSMUST00000228716 1117 ntAPPRIS P1 BASIC9.43□□□□□ -0.9
Spg11Q3UHA3 Rpl32-201ENSMUST00000081840 517 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Spg11Q3UHA3 Pdzk1-203ENSMUST00000107070 2711 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Spg11Q3UHA3 Map4-214ENSMUST00000199498 4055 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Spg11Q3UHA3 Ddx55-201ENSMUST00000071057 2799 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Spg11Q3UHA3 Apex2-205ENSMUST00000112725 3613 ntTSL 5 BASIC9.43□□□□□ -0.9
Spg11Q3UHA3 Cacna1c-203ENSMUST00000112790 7631 ntAPPRIS ALT2 TSL 1 (best) BASIC9.43□□□□□ -0.9
Spg11Q3UHA3 Lgals8-203ENSMUST00000124888 2843 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Spg11Q3UHA3 Furin-202ENSMUST00000120753 4332 ntAPPRIS P1 TSL 5 BASIC9.43□□□□□ -0.9
Spg11Q3UHA3 Trpc6-203ENSMUST00000217462 3168 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Spg11Q3UHA3 Eef1g-201ENSMUST00000052248 1864 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Spg11Q3UHA3 Ctss-202ENSMUST00000116304 1355 ntAPPRIS P3 TSL 1 (best) BASIC9.42□□□□□ -0.9
Spg11Q3UHA3 Lox-201ENSMUST00000025409 3604 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Spg11Q3UHA3 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Spg11Q3UHA3 Arid4a-201ENSMUST00000046305 4998 ntAPPRIS P1 TSL 5 BASIC9.42□□□□□ -0.9
Spg11Q3UHA3 Grm1-202ENSMUST00000105560 4265 ntAPPRIS ALT2 TSL 1 (best) BASIC9.42□□□□□ -0.9
Spg11Q3UHA3 Gm43585-201ENSMUST00000199375 1403 ntBASIC9.42□□□□□ -0.9
Spg11Q3UHA3 Ttc30b-201ENSMUST00000099996 2737 ntAPPRIS P1 BASIC9.42□□□□□ -0.9
Spg11Q3UHA3 Defb20-201ENSMUST00000109836 690 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Spg11Q3UHA3 1700025N21Rik-201ENSMUST00000160997 686 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Spg11Q3UHA3 1700065J18Rik-202ENSMUST00000190576 387 ntTSL 3 BASIC9.42□□□□□ -0.9
Spg11Q3UHA3 Gm37317-201ENSMUST00000192198 1024 ntBASIC9.42□□□□□ -0.9
Spg11Q3UHA3 Gm37232-201ENSMUST00000194887 367 ntBASIC9.42□□□□□ -0.9
Spg11Q3UHA3 Gm7442-201ENSMUST00000197778 383 ntBASIC9.42□□□□□ -0.9
Spg11Q3UHA3 Gm44204-201ENSMUST00000204722 737 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Spg11Q3UHA3 Fxyd4-208ENSMUST00000204950 586 ntTSL 3 BASIC9.42□□□□□ -0.9
Spg11Q3UHA3 BC042761-201ENSMUST00000218344 938 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Spg11Q3UHA3 Gm12691-202ENSMUST00000222516 918 ntTSL 5 BASIC9.42□□□□□ -0.9
Spg11Q3UHA3 AC100209.1-201ENSMUST00000225562 409 ntBASIC9.42□□□□□ -0.9
Spg11Q3UHA3 Gm14267-205ENSMUST00000226697 1299 ntBASIC9.42□□□□□ -0.9
Spg11Q3UHA3 AC115784.1-201ENSMUST00000227687 1010 ntBASIC9.42□□□□□ -0.9
Spg11Q3UHA3 Ucma-201ENSMUST00000027978 756 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Spg11Q3UHA3 Sun5-201ENSMUST00000028982 1157 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Spg11Q3UHA3 Cd2-201ENSMUST00000029456 1153 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Spg11Q3UHA3 Plac8l1-201ENSMUST00000081374 763 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Spg11Q3UHA3 Sat2-201ENSMUST00000092969 800 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Spg11Q3UHA3 Zfp568-201ENSMUST00000074322 2016 ntAPPRIS P3 TSL 5 BASIC9.42□□□□□ -0.9
Spg11Q3UHA3 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Spg11Q3UHA3 Daam2-201ENSMUST00000057610 3646 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Spg11Q3UHA3 Pcdhb9-201ENSMUST00000057228 3055 ntAPPRIS P1 BASIC9.42□□□□□ -0.9
Spg11Q3UHA3 Dcc-202ENSMUST00000114943 5219 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Spg11Q3UHA3 Ndrg4-203ENSMUST00000080666 2738 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Spg11Q3UHA3 Rbp3-201ENSMUST00000035695 5295 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Spg11Q3UHA3 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC9.42□□□□□ -0.9
Spg11Q3UHA3 Mybpc3-202ENSMUST00000137942 4134 ntAPPRIS ALT2 TSL 5 BASIC9.42□□□□□ -0.9
Spg11Q3UHA3 Zfp386-201ENSMUST00000073551 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC9.42□□□□□ -0.9
Spg11Q3UHA3 Opcml-201ENSMUST00000073822 2378 ntAPPRIS P1 TSL 5 BASIC9.42□□□□□ -0.9
Spg11Q3UHA3 Terb1-201ENSMUST00000064576 2950 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Spg11Q3UHA3 Ttc39b-203ENSMUST00000102823 8831 ntAPPRIS P2 TSL 1 (best) BASIC9.42□□□□□ -0.9
Spg11Q3UHA3 Il7-205ENSMUST00000194279 4858 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Spg11Q3UHA3 Hmox2-203ENSMUST00000120232 1287 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Spg11Q3UHA3 Snhg12-201ENSMUST00000126380 890 ntTSL 2 BASIC9.42□□□□□ -0.9
Spg11Q3UHA3 Bud31-206ENSMUST00000162308 705 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Spg11Q3UHA3 Gm7693-201ENSMUST00000183257 988 ntBASIC9.42□□□□□ -0.9
Spg11Q3UHA3 Gm42495-201ENSMUST00000200324 405 ntTSL 3 BASIC9.42□□□□□ -0.9
Spg11Q3UHA3 Gm5302-201ENSMUST00000202130 796 ntBASIC9.42□□□□□ -0.9
Spg11Q3UHA3 4933432K03Rik-202ENSMUST00000206244 765 ntTSL 3 BASIC9.42□□□□□ -0.9
Spg11Q3UHA3 AC160635.1-201ENSMUST00000216731 474 ntBASIC9.42□□□□□ -0.9
Spg11Q3UHA3 Gm22054-201ENSMUST00000083395 155 ntBASIC9.42□□□□□ -0.9
Spg11Q3UHA3 Fry-201ENSMUST00000087204 10893 ntAPPRIS P1 TSL 5 BASIC9.42□□□□□ -0.9
Spg11Q3UHA3 5730405O15Rik-201ENSMUST00000127521 1749 ntTSL 2 BASIC9.42□□□□□ -0.9
Spg11Q3UHA3 Sun1-201ENSMUST00000058716 4134 ntAPPRIS P3 TSL 1 (best) BASIC9.42□□□□□ -0.9
Spg11Q3UHA3 A530006G24Rik-201ENSMUST00000152542 1331 ntTSL 2 BASIC9.42□□□□□ -0.9
Spg11Q3UHA3 Ap3m1-201ENSMUST00000022371 1770 ntTSL 5 BASIC9.42□□□□□ -0.9
Spg11Q3UHA3 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Spg11Q3UHA3 Mtr-201ENSMUST00000099856 8294 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Spg11Q3UHA3 P2rx2-206ENSMUST00000200214 1568 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Spg11Q3UHA3 Zfp423-203ENSMUST00000165770 4334 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Spg11Q3UHA3 Gm36987-201ENSMUST00000194704 2979 ntBASIC9.41□□□□□ -0.9
Spg11Q3UHA3 Gm20531-201ENSMUST00000174861 1373 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Spg11Q3UHA3 Ccr6-206ENSMUST00000180103 1425 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Spg11Q3UHA3 Nfya-201ENSMUST00000046719 3645 ntAPPRIS ALT1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Spg11Q3UHA3 Adamts1-201ENSMUST00000023610 4884 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Spg11Q3UHA3 Taf1b-201ENSMUST00000075954 2209 ntAPPRIS P2 TSL 1 (best) BASIC9.41□□□□□ -0.9
Spg11Q3UHA3 Olfr279-202ENSMUST00000205772 5330 ntAPPRIS P1 TSL 3 BASIC9.41□□□□□ -0.9
Spg11Q3UHA3 Gm12445-201ENSMUST00000117947 885 ntBASIC9.41□□□□□ -0.9
Spg11Q3UHA3 Gm12727-201ENSMUST00000119885 359 ntBASIC9.41□□□□□ -0.9
Spg11Q3UHA3 Nectin3-205ENSMUST00000121245 953 ntTSL 3 BASIC9.41□□□□□ -0.9
Retrieved 100 of 76,532 protein–RNA pairs in 42.2 ms