Protein–RNA interactions for Protein: P62311

Lsm3, U6 snRNA-associated Sm-like protein LSm3, mousemouse

Known RBP Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm3P62311 2410015M20Rik-201ENSMUST00000052832 755 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Lsm3P62311 Lrmda-201ENSMUST00000075639 908 ntAPPRIS P2 TSL 1 (best) BASIC9.16□□□□□ -0.94
Lsm3P62311 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
Lsm3P62311 Cd300lf-202ENSMUST00000106561 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC9.16□□□□□ -0.94
Lsm3P62311 Cfap100-201ENSMUST00000062750 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC9.16□□□□□ -0.94
Lsm3P62311 Grik1-206ENSMUST00000211444 3528 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
Lsm3P62311 Cdkl4-201ENSMUST00000086545 2931 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Lsm3P62311 C820005J03Rik-201ENSMUST00000195997 2312 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
Lsm3P62311 Gabrr3-201ENSMUST00000114341 1656 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Lsm3P62311 Rdh9-201ENSMUST00000052652 2698 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Lsm3P62311 Bcl2l14-202ENSMUST00000111960 1578 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Lsm3P62311 Lrrfip1-203ENSMUST00000097649 3645 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
Lsm3P62311 Epb41-205ENSMUST00000105972 2577 ntAPPRIS P3 TSL 5 BASIC9.16□□□□□ -0.94
Lsm3P62311 Sgpl1-201ENSMUST00000092498 4070 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Lsm3P62311 Cdadc1-201ENSMUST00000022555 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC9.15□□□□□ -0.94
Lsm3P62311 Hddc3-201ENSMUST00000032747 1510 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Lsm3P62311 Gm32335-201ENSMUST00000216896 2948 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
Lsm3P62311 Fhad1-203ENSMUST00000105780 4809 ntAPPRIS P1 TSL 5 BASIC9.15□□□□□ -0.94
Lsm3P62311 Tmem63c-202ENSMUST00000131878 3311 ntAPPRIS P1 TSL 5 BASIC9.15□□□□□ -0.94
Lsm3P62311 Actl9-201ENSMUST00000174088 1373 ntAPPRIS P1 BASIC9.15□□□□□ -0.94
Lsm3P62311 Trh-201ENSMUST00000006046 1384 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Lsm3P62311 Cald1-202ENSMUST00000079391 4127 ntAPPRIS ALT2 TSL 5 BASIC9.15□□□□□ -0.94
Lsm3P62311 Dpysl2-201ENSMUST00000022629 4520 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Lsm3P62311 Lif-202ENSMUST00000066283 4026 ntAPPRIS P1 TSL 5 BASIC9.15□□□□□ -0.94
Lsm3P62311 Mab21l3-201ENSMUST00000061831 3558 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Lsm3P62311 Foxh1-201ENSMUST00000037824 1306 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Lsm3P62311 Dcdc2a-202ENSMUST00000069614 6634 ntAPPRIS P3 TSL 1 (best) BASIC9.15□□□□□ -0.94
Lsm3P62311 Pcdhb5-201ENSMUST00000078271 3535 ntAPPRIS P1 BASIC9.15□□□□□ -0.94
Lsm3P62311 Vmn1r199-202ENSMUST00000227685 5713 ntAPPRIS P2 BASIC9.15□□□□□ -0.94
Lsm3P62311 Wasf1-201ENSMUST00000019975 2609 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Lsm3P62311 Mink1-204ENSMUST00000102558 3903 ntAPPRIS ALT2 TSL 1 (best) BASIC9.15□□□□□ -0.94
Lsm3P62311 Zfp94-202ENSMUST00000108436 2599 ntAPPRIS ALT2 TSL 1 (best) BASIC9.15□□□□□ -0.94
Lsm3P62311 Tsc1-202ENSMUST00000113867 7682 ntAPPRIS ALT2 TSL 1 (best) BASIC9.15□□□□□ -0.94
Lsm3P62311 Tsc1-201ENSMUST00000028155 7674 ntAPPRIS P3 TSL 1 (best) BASIC9.15□□□□□ -0.94
Lsm3P62311 Urad-201ENSMUST00000100433 766 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Lsm3P62311 Lcn6-203ENSMUST00000114199 729 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Lsm3P62311 Rbm3-202ENSMUST00000115615 1183 ntAPPRIS ALT1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Lsm3P62311 Rbm3-203ENSMUST00000115616 1225 ntAPPRIS P3 TSL 1 (best) BASIC9.15□□□□□ -0.94
Lsm3P62311 Gm15197-201ENSMUST00000120526 478 ntBASIC9.15□□□□□ -0.94
Lsm3P62311 Tnfrsf18-203ENSMUST00000122001 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC9.15□□□□□ -0.94
Lsm3P62311 Gm14174-201ENSMUST00000153158 161 ntTSL 5 BASIC9.15□□□□□ -0.94
Lsm3P62311 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC9.15□□□□□ -0.94
Lsm3P62311 Igkv4-54-201ENSMUST00000177697 288 ntAPPRIS P1 BASIC9.15□□□□□ -0.94
Lsm3P62311 Mrpl20-206ENSMUST00000185148 494 ntTSL 3 BASIC9.15□□□□□ -0.94
Lsm3P62311 Gm5441-202ENSMUST00000190132 449 ntTSL 2 BASIC9.15□□□□□ -0.94
Lsm3P62311 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC9.15□□□□□ -0.94
Lsm3P62311 Gm6905-201ENSMUST00000205729 511 ntBASIC9.15□□□□□ -0.94
Lsm3P62311 Ddo-207ENSMUST00000216830 806 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
Lsm3P62311 Gm18515-201ENSMUST00000219755 797 ntBASIC9.15□□□□□ -0.94
Lsm3P62311 AC144543.1-201ENSMUST00000221840 1064 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
Lsm3P62311 CT010506.1-201ENSMUST00000223673 349 ntBASIC9.15□□□□□ -0.94
Lsm3P62311 AC133499.1-201ENSMUST00000227778 1097 ntAPPRIS P1 BASIC9.15□□□□□ -0.94
Lsm3P62311 Acyp1-201ENSMUST00000008966 648 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Lsm3P62311 Speer4c-201ENSMUST00000095005 1159 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Lsm3P62311 Speer4d-201ENSMUST00000095006 1194 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Lsm3P62311 Bmf-201ENSMUST00000090219 4642 ntAPPRIS P3 TSL 1 (best) BASIC9.15□□□□□ -0.94
Lsm3P62311 Gm42575-201ENSMUST00000202942 1674 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
Lsm3P62311 Itgbl1-201ENSMUST00000049681 4065 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Lsm3P62311 Gm7823-201ENSMUST00000120761 1623 ntBASIC9.15□□□□□ -0.94
Lsm3P62311 Slc2a9-201ENSMUST00000005238 3243 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
Lsm3P62311 Gucy2d-203ENSMUST00000206435 3634 ntAPPRIS P1 TSL 5 BASIC9.15□□□□□ -0.94
Lsm3P62311 Lyplal1-201ENSMUST00000045388 1578 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.95
Lsm3P62311 Gm20682-201ENSMUST00000176552 3517 ntTSL 5 BASIC9.15□□□□□ -0.95
Lsm3P62311 Fkbp5-206ENSMUST00000177939 3844 ntAPPRIS P1 TSL 5 BASIC9.15□□□□□ -0.95
Lsm3P62311 Cdh23-205ENSMUST00000105464 11090 ntAPPRIS P2 TSL 5 BASIC9.15□□□□□ -0.95
Lsm3P62311 Gm12758-201ENSMUST00000127010 4175 ntTSL 1 (best) BASIC9.15□□□□□ -0.95
Lsm3P62311 Rimklb-206ENSMUST00000204731 3039 ntTSL 1 (best) BASIC9.15□□□□□ -0.95
Lsm3P62311 Baiap3-204ENSMUST00000182435 3758 ntAPPRIS ALT2 TSL 5 BASIC9.15□□□□□ -0.95
Lsm3P62311 Dst-205ENSMUST00000182314 2643 ntTSL 1 (best) BASIC9.15□□□□□ -0.95
Lsm3P62311 Mbd5-203ENSMUST00000112754 5978 ntAPPRIS ALT2 TSL 5 BASIC9.15□□□□□ -0.95
Lsm3P62311 Fam227a-203ENSMUST00000109648 5187 ntAPPRIS P1 TSL 5 BASIC9.15□□□□□ -0.95
Lsm3P62311 Stx12-201ENSMUST00000030698 2934 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.95
Lsm3P62311 A230009B12Rik-202ENSMUST00000159602 1810 ntTSL 1 (best) BASIC9.15□□□□□ -0.95
Lsm3P62311 Utp14a-201ENSMUST00000080713 2507 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Lsm3P62311 Esrrb-204ENSMUST00000116402 4300 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Lsm3P62311 Prdm9-205ENSMUST00000147532 1447 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Lsm3P62311 Tubb1-201ENSMUST00000016399 1406 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Lsm3P62311 AC163040.1-201ENSMUST00000222979 4288 ntBASIC9.14□□□□□ -0.95
Lsm3P62311 Gm3642-201ENSMUST00000166895 1762 ntAPPRIS P5 TSL 5 BASIC9.14□□□□□ -0.95
Lsm3P62311 9330154K18Rik-201ENSMUST00000176703 2104 ntBASIC9.14□□□□□ -0.95
Lsm3P62311 Ncor1-202ENSMUST00000037575 4246 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Lsm3P62311 Gm37233-201ENSMUST00000192173 6263 ntBASIC9.14□□□□□ -0.95
Lsm3P62311 Acsm2-201ENSMUST00000084647 2051 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Lsm3P62311 Tpm1-213ENSMUST00000113697 1742 ntTSL 2 BASIC9.14□□□□□ -0.95
Lsm3P62311 Wdr61-202ENSMUST00000118771 3372 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Lsm3P62311 Gm13497-201ENSMUST00000139497 2038 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Lsm3P62311 Phc1-202ENSMUST00000081849 3683 ntAPPRIS ALT2 TSL 5 BASIC9.14□□□□□ -0.95
Lsm3P62311 C330007P06Rik-202ENSMUST00000115248 3340 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Lsm3P62311 Stxbp5-202ENSMUST00000125200 3300 ntTSL 5 BASIC9.14□□□□□ -0.95
Lsm3P62311 Gsdmc2-201ENSMUST00000089900 1981 ntAPPRIS P1 TSL 5 BASIC9.14□□□□□ -0.95
Lsm3P62311 Vps8-204ENSMUST00000117598 4935 ntAPPRIS P2 TSL 1 (best) BASIC9.14□□□□□ -0.95
Lsm3P62311 Plekho2-201ENSMUST00000068944 3273 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Lsm3P62311 Mtch2-202ENSMUST00000111467 2281 ntTSL 5 BASIC9.14□□□□□ -0.95
Lsm3P62311 Stk38l-202ENSMUST00000111644 2274 ntTSL 5 BASIC9.14□□□□□ -0.95
Lsm3P62311 Tec-202ENSMUST00000073843 2573 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Lsm3P62311 Gm14058-201ENSMUST00000116082 735 ntBASIC9.14□□□□□ -0.95
Lsm3P62311 Gm13035-201ENSMUST00000117496 342 ntBASIC9.14□□□□□ -0.95
Lsm3P62311 Zfp36l1-ps-201ENSMUST00000118349 899 ntBASIC9.14□□□□□ -0.95
Lsm3P62311 Rpsa-ps4-201ENSMUST00000121691 888 ntBASIC9.14□□□□□ -0.95
Lsm3P62311 Gm14616-201ENSMUST00000131690 314 ntTSL 3 BASIC9.14□□□□□ -0.95
Retrieved 100 of 76,532 protein–RNA pairs in 47.4 ms