Protein–RNA interactions for Protein: P11370

Fv4, Retrovirus-related Env polyprotein from Fv-4 locus, mousemouse

Predictions only

Length 679 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fv4P11370 Gm7596-202ENSMUST00000202171 737 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Fv4P11370 Gm44741-201ENSMUST00000207503 2127 ntBASIC9.84□□□□□ -0.83
Fv4P11370 Gm44709-201ENSMUST00000207649 448 ntTSL 5 BASIC9.84□□□□□ -0.83
Fv4P11370 D9Wsu149-201ENSMUST00000214169 594 ntBASIC9.84□□□□□ -0.83
Fv4P11370 Bnip3l-ps-202ENSMUST00000220709 1132 ntBASIC9.84□□□□□ -0.83
Fv4P11370 Gm18499-201ENSMUST00000220808 1021 ntBASIC9.84□□□□□ -0.83
Fv4P11370 Gm6960-201ENSMUST00000051629 639 ntBASIC9.84□□□□□ -0.83
Fv4P11370 Cstb-201ENSMUST00000005185 603 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Fv4P11370 Haao-201ENSMUST00000000687 1222 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Fv4P11370 Vmn1r192-201ENSMUST00000072632 1067 ntAPPRIS P1 BASIC9.84□□□□□ -0.83
Fv4P11370 Prr19-201ENSMUST00000080288 1240 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Fv4P11370 Gm15947-201ENSMUST00000161395 2742 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Fv4P11370 Arhgap36-201ENSMUST00000042444 2733 ntAPPRIS ALT2 TSL 5 BASIC9.84□□□□□ -0.83
Fv4P11370 Slc38a3-203ENSMUST00000177567 2456 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Fv4P11370 Gm10390-202ENSMUST00000181905 4269 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Fv4P11370 Gm42731-201ENSMUST00000201839 1641 ntBASIC9.84□□□□□ -0.83
Fv4P11370 Inpp4b-212ENSMUST00000215332 5486 ntAPPRIS ALT2 TSL 1 (best) BASIC9.84□□□□□ -0.83
Fv4P11370 Mapk1ip1-202ENSMUST00000118810 1350 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Fv4P11370 Epha6-203ENSMUST00000161358 1356 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Fv4P11370 Esrp2-201ENSMUST00000115979 3536 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Fv4P11370 Gm37447-201ENSMUST00000195625 2928 ntBASIC9.84□□□□□ -0.83
Fv4P11370 Slco5a1-202ENSMUST00000115403 8509 ntAPPRIS P2 TSL 5 BASIC9.84□□□□□ -0.83
Fv4P11370 Bcl9-207ENSMUST00000166341 4652 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Fv4P11370 Htr1d-203ENSMUST00000121571 2426 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Fv4P11370 Mthfsd-201ENSMUST00000047282 8312 ntAPPRIS P3 TSL 1 (best) BASIC9.84□□□□□ -0.83
Fv4P11370 Sgca-201ENSMUST00000100551 1465 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Fv4P11370 Mcemp1-201ENSMUST00000014118 1494 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Fv4P11370 Gm43112-201ENSMUST00000196665 3122 ntBASIC9.84□□□□□ -0.83
Fv4P11370 Sf3a3-201ENSMUST00000030734 1820 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Fv4P11370 Mia3-202ENSMUST00000109158 2961 ntAPPRIS ALT2 TSL 5 BASIC9.84□□□□□ -0.83
Fv4P11370 Entpd8-202ENSMUST00000114376 1942 ntAPPRIS ALT2 TSL 5 BASIC9.84□□□□□ -0.83
Fv4P11370 Gm45193-201ENSMUST00000204686 1552 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Fv4P11370 Clasp1-208ENSMUST00000187713 5367 ntAPPRIS ALT2 TSL 5 BASIC9.83□□□□□ -0.84
Fv4P11370 Ap3b2-205ENSMUST00000152355 3168 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Fv4P11370 9430015G10Rik-202ENSMUST00000105576 1329 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Fv4P11370 Cd160-203ENSMUST00000165991 2458 ntAPPRIS ALT2 TSL 3 BASIC9.83□□□□□ -0.84
Fv4P11370 Sardh-202ENSMUST00000102886 4521 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Fv4P11370 Zcchc8-201ENSMUST00000031376 4286 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Fv4P11370 Csde1-207ENSMUST00000197827 2671 ntAPPRIS P3 TSL 5 BASIC9.83□□□□□ -0.84
Fv4P11370 Slc38a5-203ENSMUST00000115591 1853 ntAPPRIS ALT2 TSL 5 BASIC9.83□□□□□ -0.84
Fv4P11370 Slc38a5-201ENSMUST00000033512 1868 ntAPPRIS P2 TSL 1 (best) BASIC9.83□□□□□ -0.84
Fv4P11370 Foxr1-201ENSMUST00000098837 1968 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Fv4P11370 Spag6l-201ENSMUST00000023468 2416 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Fv4P11370 Lpin1-201ENSMUST00000067124 5581 ntAPPRIS P4 TSL 1 (best) BASIC9.83□□□□□ -0.84
Fv4P11370 Nbr1-203ENSMUST00000103099 4789 ntAPPRIS P3 TSL 1 (best) BASIC9.83□□□□□ -0.84
Fv4P11370 4930503B20Rik-201ENSMUST00000049703 2080 ntAPPRIS P2 TSL 1 (best) BASIC9.83□□□□□ -0.84
Fv4P11370 Gm39312-201ENSMUST00000213586 2195 ntTSL 5 BASIC9.83□□□□□ -0.84
Fv4P11370 Fbxo34-204ENSMUST00000165714 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC9.83□□□□□ -0.84
Fv4P11370 Ptpn20-201ENSMUST00000022508 3153 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Fv4P11370 Arhgap26-216ENSMUST00000155576 2280 ntAPPRIS ALT1 TSL 5 BASIC9.83□□□□□ -0.84
Fv4P11370 Ighv7-2-201ENSMUST00000103462 354 ntAPPRIS ALT2 BASIC9.83□□□□□ -0.84
Fv4P11370 Gm23612-201ENSMUST00000103823 110 ntBASIC9.83□□□□□ -0.84
Fv4P11370 Gm10961-201ENSMUST00000106703 144 ntAPPRIS P1 TSL 5 BASIC9.83□□□□□ -0.84
Fv4P11370 Gm13914-201ENSMUST00000118202 991 ntBASIC9.83□□□□□ -0.84
Fv4P11370 Gm14113-201ENSMUST00000121399 976 ntBASIC9.83□□□□□ -0.84
Fv4P11370 Gm15196-201ENSMUST00000121406 482 ntBASIC9.83□□□□□ -0.84
Fv4P11370 Gm13783-201ENSMUST00000131634 732 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Fv4P11370 Pax5-209ENSMUST00000165417 1056 ntTSL 5 BASIC9.83□□□□□ -0.84
Fv4P11370 Gm23576-201ENSMUST00000179918 110 ntBASIC9.83□□□□□ -0.84
Fv4P11370 Gm26906-201ENSMUST00000180523 1228 ntTSL 5 BASIC9.83□□□□□ -0.84
Fv4P11370 Ccser2-208ENSMUST00000183007 1293 ntTSL 5 BASIC9.83□□□□□ -0.84
Fv4P11370 Arl14-201ENSMUST00000183126 1200 ntAPPRIS P1 BASIC9.83□□□□□ -0.84
Fv4P11370 Plet1os-202ENSMUST00000190941 1119 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Fv4P11370 C230057A21Rik-202ENSMUST00000195781 600 ntTSL 3 BASIC9.83□□□□□ -0.84
Fv4P11370 Gm44545-201ENSMUST00000208262 746 ntBASIC9.83□□□□□ -0.84
Fv4P11370 Gm5650-201ENSMUST00000209641 598 ntBASIC9.83□□□□□ -0.84
Fv4P11370 Gm35713-201ENSMUST00000210516 199 ntBASIC9.83□□□□□ -0.84
Fv4P11370 Gm45680-201ENSMUST00000211135 214 ntTSL 3 BASIC9.83□□□□□ -0.84
Fv4P11370 Gm4032-203ENSMUST00000211600 531 ntTSL 3 BASIC9.83□□□□□ -0.84
Fv4P11370 AC122860.1-201ENSMUST00000217669 773 ntTSL 3 BASIC9.83□□□□□ -0.84
Fv4P11370 AI463170-201ENSMUST00000217839 970 ntBASIC9.83□□□□□ -0.84
Fv4P11370 AC153379.1-201ENSMUST00000218174 485 ntTSL 3 BASIC9.83□□□□□ -0.84
Fv4P11370 AC154572.1-201ENSMUST00000226098 1204 ntBASIC9.83□□□□□ -0.84
Fv4P11370 Proca1-202ENSMUST00000078099 1254 ntAPPRIS P2 TSL 1 (best) BASIC9.83□□□□□ -0.84
Fv4P11370 Tardbp-209ENSMUST00000165113 6495 ntTSL 5 BASIC9.83□□□□□ -0.84
Fv4P11370 1700048O20Rik-202ENSMUST00000214777 1900 ntTSL 3 BASIC9.83□□□□□ -0.84
Fv4P11370 Htr2c-202ENSMUST00000096299 4883 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Fv4P11370 Slc45a3-202ENSMUST00000177943 3212 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Fv4P11370 Ptpn2-202ENSMUST00000120934 1497 ntAPPRIS ALT2 TSL 5 BASIC9.83□□□□□ -0.84
Fv4P11370 Cyp2d9-201ENSMUST00000089129 1651 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Fv4P11370 Drc3-203ENSMUST00000108722 1858 ntAPPRIS ALT2 TSL 5 BASIC9.83□□□□□ -0.84
Fv4P11370 Mfap3l-201ENSMUST00000034066 1896 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Fv4P11370 Gal3st2b-202ENSMUST00000178757 2722 ntAPPRIS P2 TSL 1 (best) BASIC9.83□□□□□ -0.84
Fv4P11370 Rbm27-201ENSMUST00000046972 6134 ntAPPRIS ALT2 TSL 5 BASIC9.83□□□□□ -0.84
Fv4P11370 D030018L15Rik-203ENSMUST00000140253 2902 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Fv4P11370 Gsdme-203ENSMUST00000165099 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC9.83□□□□□ -0.84
Fv4P11370 Eif2d-203ENSMUST00000112446 2153 ntAPPRIS P3 TSL 1 (best) BASIC9.82□□□□□ -0.84
Fv4P11370 Gm8848-201ENSMUST00000197270 1343 ntBASIC9.82□□□□□ -0.84
Fv4P11370 Tro-203ENSMUST00000112709 6610 ntAPPRIS P3 TSL 5 BASIC9.82□□□□□ -0.84
Fv4P11370 Gm37759-201ENSMUST00000194155 3246 ntBASIC9.82□□□□□ -0.84
Fv4P11370 Slc34a2-201ENSMUST00000094787 4176 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Fv4P11370 Cptp-201ENSMUST00000030950 2662 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Fv4P11370 Gm45663-201ENSMUST00000210429 1632 ntBASIC9.82□□□□□ -0.84
Fv4P11370 Gm14705-201ENSMUST00000154109 1824 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Fv4P11370 Capn3-202ENSMUST00000028749 3174 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Fv4P11370 Oma1-201ENSMUST00000035780 1915 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Fv4P11370 Olfr464-205ENSMUST00000217112 2232 ntAPPRIS P1 TSL 5 BASIC9.82□□□□□ -0.84
Fv4P11370 Spty2d1-201ENSMUST00000061639 5223 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Fv4P11370 Fgf1-202ENSMUST00000115582 2449 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Fv4P11370 Pcdhga5-201ENSMUST00000193414 4664 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Retrieved 100 of 76,532 protein–RNA pairs in 51.6 ms