Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 Tjp1-201ENSMUST00000032729 6102 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Trub1Q8C0D0 Adcy6-201ENSMUST00000096224 6038 ntAPPRIS P2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Trub1Q8C0D0 Pla2g5-202ENSMUST00000102511 690 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Trub1Q8C0D0 Pdzk1ip1-202ENSMUST00000106548 887 ntAPPRIS P3 TSL 1 (best) BASIC10.53□□□□□ -0.72
Trub1Q8C0D0 Plac8-203ENSMUST00000112910 1224 ntAPPRIS P1 TSL 2 BASIC10.53□□□□□ -0.72
Trub1Q8C0D0 Tmed5-203ENSMUST00000117759 482 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Trub1Q8C0D0 Gm5510-201ENSMUST00000117826 486 ntBASIC10.53□□□□□ -0.72
Trub1Q8C0D0 Gm15287-201ENSMUST00000132564 751 ntTSL 2 BASIC10.53□□□□□ -0.72
Trub1Q8C0D0 Gm17231-201ENSMUST00000163186 645 ntTSL 3 BASIC10.53□□□□□ -0.72
Trub1Q8C0D0 Dhx34-207ENSMUST00000163968 3801 ntAPPRIS P2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Trub1Q8C0D0 Gm7572-201ENSMUST00000182616 766 ntBASIC10.53□□□□□ -0.72
Trub1Q8C0D0 1810018F18Rik-201ENSMUST00000188253 277 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Trub1Q8C0D0 Gm37350-201ENSMUST00000192782 313 ntTSL 5 BASIC10.53□□□□□ -0.72
Trub1Q8C0D0 Gm37452-201ENSMUST00000194416 1160 ntBASIC10.53□□□□□ -0.72
Trub1Q8C0D0 Cdk5-203ENSMUST00000198990 783 ntTSL 5 BASIC10.53□□□□□ -0.72
Trub1Q8C0D0 Mpv17-206ENSMUST00000201353 846 ntAPPRIS P3 TSL 3 BASIC10.53□□□□□ -0.72
Trub1Q8C0D0 AC174797.2-202ENSMUST00000225729 568 ntBASIC10.53□□□□□ -0.72
Trub1Q8C0D0 AC107711.1-201ENSMUST00000227258 1295 ntBASIC10.53□□□□□ -0.72
Trub1Q8C0D0 CT030652.1-201ENSMUST00000227377 1235 ntBASIC10.53□□□□□ -0.72
Trub1Q8C0D0 Sept4-202ENSMUST00000063156 1245 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Trub1Q8C0D0 Slitrk1-201ENSMUST00000100322 5359 ntAPPRIS P1 BASIC10.53□□□□□ -0.72
Trub1Q8C0D0 Gpm6b-204ENSMUST00000112226 3174 ntAPPRIS ALT1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Trub1Q8C0D0 Gm14164-202ENSMUST00000128577 1999 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Trub1Q8C0D0 Strip2-202ENSMUST00000115224 3524 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Trub1Q8C0D0 Acbd5-212ENSMUST00000227663 4566 ntAPPRIS ALT2 BASIC10.53□□□□□ -0.72
Trub1Q8C0D0 Ddo-201ENSMUST00000019977 3000 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Trub1Q8C0D0 Ppp6c-205ENSMUST00000204701 1495 ntTSL 5 BASIC10.53□□□□□ -0.72
Trub1Q8C0D0 Fblim1-203ENSMUST00000105785 3091 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Trub1Q8C0D0 Ank3-220ENSMUST00000182439 2586 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Trub1Q8C0D0 Limk1-202ENSMUST00000111233 3109 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Trub1Q8C0D0 Gm40655-201ENSMUST00000220802 1880 ntTSL 5 BASIC10.53□□□□□ -0.72
Trub1Q8C0D0 Gk2-201ENSMUST00000059657 1880 ntAPPRIS P1 BASIC10.53□□□□□ -0.72
Trub1Q8C0D0 Usp44-202ENSMUST00000216224 2449 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
Trub1Q8C0D0 Oprm1-212ENSMUST00000105603 2053 ntTSL 5 BASIC10.53□□□□□ -0.72
Trub1Q8C0D0 Cipc-205ENSMUST00000187814 4098 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Trub1Q8C0D0 Cipc-201ENSMUST00000038369 4098 ntAPPRIS P2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Trub1Q8C0D0 Pus7l-201ENSMUST00000049151 2840 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Trub1Q8C0D0 Olfr46-203ENSMUST00000214180 7750 ntAPPRIS ALT2 TSL 5 BASIC10.52□□□□□ -0.72
Trub1Q8C0D0 Vgll3-202ENSMUST00000227997 1383 ntBASIC10.52□□□□□ -0.72
Trub1Q8C0D0 Plcxd2-201ENSMUST00000130481 7140 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Trub1Q8C0D0 Vipas39-202ENSMUST00000072744 2524 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Trub1Q8C0D0 Abcc4-201ENSMUST00000036554 5715 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.72
Trub1Q8C0D0 Zfp141-203ENSMUST00000174407 4069 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Trub1Q8C0D0 Col6a3-202ENSMUST00000097653 9001 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.73
Trub1Q8C0D0 Trim13-202ENSMUST00000165015 1619 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Trub1Q8C0D0 Dph5-202ENSMUST00000106505 1836 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Trub1Q8C0D0 Rabep1-206ENSMUST00000177731 3167 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Trub1Q8C0D0 Gm44070-201ENSMUST00000203389 2220 ntBASIC10.52□□□□□ -0.73
Trub1Q8C0D0 Ints6l-201ENSMUST00000039374 3766 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Trub1Q8C0D0 Gm38901-201ENSMUST00000202448 3008 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Trub1Q8C0D0 Tubgcp5-205ENSMUST00000205796 3448 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Trub1Q8C0D0 Gm24471-201ENSMUST00000104485 131 ntBASIC10.52□□□□□ -0.73
Trub1Q8C0D0 Olfr1263-201ENSMUST00000111507 1029 ntAPPRIS P1 BASIC10.52□□□□□ -0.73
Trub1Q8C0D0 Gm16167-201ENSMUST00000160428 1065 ntBASIC10.52□□□□□ -0.73
Trub1Q8C0D0 Tex29-204ENSMUST00000166638 561 ntAPPRIS P2 TSL 5 BASIC10.52□□□□□ -0.73
Trub1Q8C0D0 Gm6291-201ENSMUST00000179994 309 ntBASIC10.52□□□□□ -0.73
Trub1Q8C0D0 1700088E04Rik-207ENSMUST00000188562 631 ntTSL 3 BASIC10.52□□□□□ -0.73
Trub1Q8C0D0 Tmprss11c-202ENSMUST00000196462 1257 ntAPPRIS ALT2 TSL 5 BASIC10.52□□□□□ -0.73
Trub1Q8C0D0 Chac2-201ENSMUST00000020553 1018 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Trub1Q8C0D0 Gm3318-201ENSMUST00000217604 1183 ntBASIC10.52□□□□□ -0.73
Trub1Q8C0D0 AC160991.1-201ENSMUST00000224924 753 ntBASIC10.52□□□□□ -0.73
Trub1Q8C0D0 Ndufc1-201ENSMUST00000038108 1249 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Trub1Q8C0D0 Olfr1513-201ENSMUST00000089739 942 ntAPPRIS P1 BASIC10.52□□□□□ -0.73
Trub1Q8C0D0 Vmn1r199-201ENSMUST00000091732 1104 ntAPPRIS P2 BASIC10.52□□□□□ -0.73
Trub1Q8C0D0 Rab7-201ENSMUST00000095048 1275 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Trub1Q8C0D0 Olfr1313-201ENSMUST00000099599 938 ntAPPRIS P1 BASIC10.52□□□□□ -0.73
Trub1Q8C0D0 Pnpla3-201ENSMUST00000045289 4640 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.73
Trub1Q8C0D0 Gabrr3-201ENSMUST00000114341 1656 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Trub1Q8C0D0 Gm43813-201ENSMUST00000196847 2294 ntTSL 5 BASIC10.52□□□□□ -0.73
Trub1Q8C0D0 Gm37036-201ENSMUST00000192836 2506 ntBASIC10.52□□□□□ -0.73
Trub1Q8C0D0 AC104200.1-201ENSMUST00000224527 1746 ntBASIC10.52□□□□□ -0.73
Trub1Q8C0D0 Lhx9-202ENSMUST00000046870 3645 ntAPPRIS ALT1 TSL 5 BASIC10.52□□□□□ -0.73
Trub1Q8C0D0 Phf20-201ENSMUST00000037401 5737 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Trub1Q8C0D0 Gm9979-201ENSMUST00000069457 3005 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Trub1Q8C0D0 Serpina1e-202ENSMUST00000122229 1575 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Trub1Q8C0D0 Ino80dos-201ENSMUST00000138611 1576 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Trub1Q8C0D0 CT009713.3-201ENSMUST00000224987 1565 ntBASIC10.52□□□□□ -0.73
Trub1Q8C0D0 Dglucy-201ENSMUST00000069782 3295 ntAPPRIS P2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Trub1Q8C0D0 Xirp1-201ENSMUST00000111635 5839 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Trub1Q8C0D0 Fam53a-203ENSMUST00000065162 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trub1Q8C0D0 Zmiz1-208ENSMUST00000162645 7482 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Trub1Q8C0D0 AC129336.1-201ENSMUST00000220224 2277 ntBASIC10.51□□□□□ -0.73
Trub1Q8C0D0 Nrp1-201ENSMUST00000026917 3597 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trub1Q8C0D0 Dedd-202ENSMUST00000097467 1606 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trub1Q8C0D0 Gm37671-201ENSMUST00000193198 2096 ntBASIC10.51□□□□□ -0.73
Trub1Q8C0D0 Snx6-204ENSMUST00000218934 1441 ntTSL 5 BASIC10.51□□□□□ -0.73
Trub1Q8C0D0 Usp4-209ENSMUST00000194959 3436 ntAPPRIS ALT1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trub1Q8C0D0 St3gal6-207ENSMUST00000137035 4123 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trub1Q8C0D0 Plekhg5-201ENSMUST00000084115 4113 ntAPPRIS ALT2 TSL 2 BASIC10.51□□□□□ -0.73
Trub1Q8C0D0 Gm4880-201ENSMUST00000207645 1696 ntBASIC10.51□□□□□ -0.73
Trub1Q8C0D0 Ms4a6b-201ENSMUST00000025580 1687 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trub1Q8C0D0 Adcy7-202ENSMUST00000168545 5937 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trub1Q8C0D0 Klf10-203ENSMUST00000227920 2144 ntBASIC10.51□□□□□ -0.73
Trub1Q8C0D0 Zfp112-201ENSMUST00000005413 3044 ntAPPRIS P2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trub1Q8C0D0 Slit2-202ENSMUST00000170109 7758 ntAPPRIS ALT2 TSL 5 BASIC10.51□□□□□ -0.73
Trub1Q8C0D0 Slit2-217ENSMUST00000174421 7785 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Trub1Q8C0D0 Plekhm1-201ENSMUST00000041272 5968 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trub1Q8C0D0 Npas4-201ENSMUST00000056129 3277 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trub1Q8C0D0 Svil-204ENSMUST00000127297 6243 ntAPPRIS ALT2 TSL 5 BASIC10.51□□□□□ -0.73
Trub1Q8C0D0 Gm5641-201ENSMUST00000091130 1488 ntBASIC10.51□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 56.7 ms