Protein–RNA interactions for Protein: Q38HM4

Trim63, E3 ubiquitin-protein ligase TRIM63, mousemouse

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim63Q38HM4 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC8.37□□□□□ -1.07
Trim63Q38HM4 Ggps1-204ENSMUST00000221713 667 ntTSL 3 BASIC8.37□□□□□ -1.07
Trim63Q38HM4 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Trim63Q38HM4 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC8.37□□□□□ -1.07
Trim63Q38HM4 Gm5356-201ENSMUST00000093326 615 ntBASIC8.37□□□□□ -1.07
Trim63Q38HM4 Fmr1-202ENSMUST00000114653 4058 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
Trim63Q38HM4 Gm44090-201ENSMUST00000204669 1834 ntBASIC8.37□□□□□ -1.07
Trim63Q38HM4 Adh6a-201ENSMUST00000013455 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC8.37□□□□□ -1.07
Trim63Q38HM4 Map2-204ENSMUST00000114013 6258 ntAPPRIS ALT2 TSL 1 (best) BASIC8.37□□□□□ -1.07
Trim63Q38HM4 Zfp592-201ENSMUST00000107353 7297 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Trim63Q38HM4 Gm7882-201ENSMUST00000177915 1762 ntBASIC8.37□□□□□ -1.07
Trim63Q38HM4 AC116596.1-201ENSMUST00000228112 1762 ntBASIC8.37□□□□□ -1.07
Trim63Q38HM4 Nup107-201ENSMUST00000064848 3114 ntAPPRIS P2 TSL 1 (best) BASIC8.37□□□□□ -1.07
Trim63Q38HM4 Gm44417-201ENSMUST00000203298 3359 ntBASIC8.37□□□□□ -1.07
Trim63Q38HM4 Rexo5-202ENSMUST00000084644 2008 ntAPPRIS P2 TSL 1 (best) BASIC8.37□□□□□ -1.07
Trim63Q38HM4 D730001G18Rik-202ENSMUST00000191407 1494 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Trim63Q38HM4 Dmac2-201ENSMUST00000077338 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC8.37□□□□□ -1.07
Trim63Q38HM4 Kif18b-201ENSMUST00000021311 3326 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Trim63Q38HM4 Cd200r4-201ENSMUST00000114626 1700 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Trim63Q38HM4 Gm6614-201ENSMUST00000111832 1953 ntAPPRIS P2 TSL 5 BASIC8.37□□□□□ -1.07
Trim63Q38HM4 Rbm43-206ENSMUST00000165313 1975 ntAPPRIS P1 TSL 3 BASIC8.37□□□□□ -1.07
Trim63Q38HM4 Gm3411-201ENSMUST00000170104 1991 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Trim63Q38HM4 Rimklb-206ENSMUST00000204731 3039 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
Trim63Q38HM4 Htr1d-202ENSMUST00000117699 2244 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Trim63Q38HM4 Ttc41-205ENSMUST00000219108 2206 ntAPPRIS ALT2 TSL 1 (best) BASIC8.37□□□□□ -1.07
Trim63Q38HM4 Lif-201ENSMUST00000040750 3798 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
Trim63Q38HM4 AC123731.1-201ENSMUST00000227417 1403 ntBASIC8.37□□□□□ -1.07
Trim63Q38HM4 Gm42895-201ENSMUST00000200761 2996 ntBASIC8.37□□□□□ -1.07
Trim63Q38HM4 Lpar1-202ENSMUST00000107570 3244 ntAPPRIS ALT1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Trim63Q38HM4 Mef2a-208ENSMUST00000156690 5538 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
Trim63Q38HM4 Gm45873-201ENSMUST00000211865 1915 ntBASIC8.37□□□□□ -1.07
Trim63Q38HM4 Patl2-201ENSMUST00000028665 2434 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Trim63Q38HM4 Dusp18-202ENSMUST00000109996 2685 ntAPPRIS P1 TSL 5 BASIC8.36□□□□□ -1.07
Trim63Q38HM4 Top3a-203ENSMUST00000117743 2932 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
Trim63Q38HM4 Zfp873-204ENSMUST00000210325 2360 ntAPPRIS P1 TSL 5 BASIC8.36□□□□□ -1.07
Trim63Q38HM4 Gm5136-201ENSMUST00000218023 1397 ntAPPRIS P1 BASIC8.36□□□□□ -1.07
Trim63Q38HM4 Gm8634-201ENSMUST00000222547 1367 ntBASIC8.36□□□□□ -1.07
Trim63Q38HM4 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Trim63Q38HM4 Gapdhs-201ENSMUST00000074758 1368 ntAPPRIS P3 TSL 5 BASIC8.36□□□□□ -1.07
Trim63Q38HM4 Sgpl1-201ENSMUST00000092498 4070 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Trim63Q38HM4 Garnl3-207ENSMUST00000137381 3551 ntAPPRIS ALT2 TSL 1 (best) BASIC8.36□□□□□ -1.07
Trim63Q38HM4 Foxp3-201ENSMUST00000045566 3572 ntAPPRIS P1 TSL 5 BASIC8.36□□□□□ -1.07
Trim63Q38HM4 Gm45280-201ENSMUST00000210484 2552 ntBASIC8.36□□□□□ -1.07
Trim63Q38HM4 Wfikkn2-201ENSMUST00000061469 3516 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Trim63Q38HM4 Abcb11-204ENSMUST00000180142 4963 ntAPPRIS ALT2 TSL 5 BASIC8.36□□□□□ -1.07
Trim63Q38HM4 Adh6a-202ENSMUST00000106247 1341 ntAPPRIS P2 TSL 1 (best) BASIC8.36□□□□□ -1.07
Trim63Q38HM4 E130018N17Rik-201ENSMUST00000129713 1309 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
Trim63Q38HM4 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Trim63Q38HM4 Prdm10-201ENSMUST00000074510 3408 ntAPPRIS P2 TSL 5 BASIC8.36□□□□□ -1.07
Trim63Q38HM4 Rab27a-203ENSMUST00000184146 3168 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Trim63Q38HM4 Kpna3-201ENSMUST00000022496 4069 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Trim63Q38HM4 1810043G02Rik-202ENSMUST00000105398 899 ntAPPRIS ALT2 TSL 1 (best) BASIC8.36□□□□□ -1.07
Trim63Q38HM4 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC8.36□□□□□ -1.07
Trim63Q38HM4 Rps19-ps3-201ENSMUST00000116174 426 ntBASIC8.36□□□□□ -1.07
Trim63Q38HM4 Gm11824-201ENSMUST00000120191 846 ntBASIC8.36□□□□□ -1.07
Trim63Q38HM4 Gm16341-201ENSMUST00000126385 377 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
Trim63Q38HM4 Gm11651-201ENSMUST00000130673 529 ntTSL 3 BASIC8.36□□□□□ -1.07
Trim63Q38HM4 9430093N23Rik-201ENSMUST00000152494 515 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
Trim63Q38HM4 AI480526-203ENSMUST00000160099 1017 ntTSL 2 BASIC8.36□□□□□ -1.07
Trim63Q38HM4 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
Trim63Q38HM4 Smarca2-213ENSMUST00000176698 955 ntTSL 5 BASIC8.36□□□□□ -1.07
Trim63Q38HM4 Vmn1r-ps147-201ENSMUST00000177028 513 ntBASIC8.36□□□□□ -1.07
Trim63Q38HM4 Gm5866-201ENSMUST00000177881 973 ntBASIC8.36□□□□□ -1.07
Trim63Q38HM4 Mir99ahg-209ENSMUST00000182820 835 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
Trim63Q38HM4 Plet1os-202ENSMUST00000190941 1119 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
Trim63Q38HM4 Gm37020-201ENSMUST00000195303 992 ntBASIC8.36□□□□□ -1.07
Trim63Q38HM4 Ube2a-202ENSMUST00000200835 911 ntTSL 5 BASIC8.36□□□□□ -1.07
Trim63Q38HM4 Gm4482-201ENSMUST00000200876 742 ntBASIC8.36□□□□□ -1.07
Trim63Q38HM4 Gm44127-201ENSMUST00000203565 291 ntTSL 3 BASIC8.36□□□□□ -1.07
Trim63Q38HM4 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC8.36□□□□□ -1.07
Trim63Q38HM4 Gm31224-201ENSMUST00000212682 513 ntTSL 3 BASIC8.36□□□□□ -1.07
Trim63Q38HM4 AC162938.2-203ENSMUST00000216604 1134 ntTSL 5 BASIC8.36□□□□□ -1.07
Trim63Q38HM4 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC8.36□□□□□ -1.07
Trim63Q38HM4 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC8.36□□□□□ -1.07
Trim63Q38HM4 Gm9899-201ENSMUST00000065519 555 ntBASIC8.36□□□□□ -1.07
Trim63Q38HM4 Gm5705-201ENSMUST00000066241 711 ntBASIC8.36□□□□□ -1.07
Trim63Q38HM4 Gm10012-201ENSMUST00000078252 192 ntBASIC8.36□□□□□ -1.07
Trim63Q38HM4 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Trim63Q38HM4 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
Trim63Q38HM4 Mgat4a-205ENSMUST00000151952 7251 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Trim63Q38HM4 Rbm28-201ENSMUST00000007993 4465 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Trim63Q38HM4 Olfr214-203ENSMUST00000214699 2610 ntAPPRIS P1 TSL 5 BASIC8.36□□□□□ -1.07
Trim63Q38HM4 Olfr214-204ENSMUST00000215846 2605 ntAPPRIS P1 TSL 5 BASIC8.36□□□□□ -1.07
Trim63Q38HM4 Cpvl-202ENSMUST00000203101 1488 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
Trim63Q38HM4 Pm20d1-201ENSMUST00000048660 2305 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Trim63Q38HM4 Mtfr1-202ENSMUST00000117529 1896 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Trim63Q38HM4 Kcnt1-215ENSMUST00000200434 3609 ntAPPRIS ALT2 TSL 5 BASIC8.36□□□□□ -1.07
Trim63Q38HM4 Gm26896-201ENSMUST00000180482 2526 ntTSL 5 BASIC8.36□□□□□ -1.07
Trim63Q38HM4 Sh3bgrl2-204ENSMUST00000188241 3155 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
Trim63Q38HM4 Gm20045-201ENSMUST00000192658 5577 ntBASIC8.36□□□□□ -1.07
Trim63Q38HM4 Slc43a2-201ENSMUST00000042561 6891 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Trim63Q38HM4 Ercc3-201ENSMUST00000025241 2708 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Trim63Q38HM4 AU019990-202ENSMUST00000143964 1614 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
Trim63Q38HM4 Gm4900-201ENSMUST00000222046 1628 ntBASIC8.36□□□□□ -1.07
Trim63Q38HM4 Pde4d-202ENSMUST00000079975 2280 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
Trim63Q38HM4 Cfap65-201ENSMUST00000094844 5727 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Trim63Q38HM4 Gm18876-201ENSMUST00000219985 1849 ntBASIC8.36□□□□□ -1.07
Trim63Q38HM4 Rpgr-204ENSMUST00000115532 3313 ntAPPRIS ALT2 TSL 1 (best) BASIC8.36□□□□□ -1.07
Trim63Q38HM4 Vmn1r51-203ENSMUST00000226542 4164 ntAPPRIS P1 BASIC8.36□□□□□ -1.07
Trim63Q38HM4 Gm15128-201ENSMUST00000112814 2027 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Retrieved 100 of 76,532 protein–RNA pairs in 37.7 ms