Protein–RNA interactions for Protein: P97459

Npas1, Neuronal PAS domain-containing protein 1, mousemouse

Predictions only

Length 594 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npas1P97459 Hmgn3-201ENSMUST00000161796 862 ntAPPRIS ALT1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Npas1P97459 Gm16226-204ENSMUST00000162639 423 ntTSL 3 BASIC8.56□□□□□ -1.04
Npas1P97459 Gm17231-202ENSMUST00000165858 663 ntTSL 5 BASIC8.56□□□□□ -1.04
Npas1P97459 Ly6g6c-201ENSMUST00000173207 598 ntAPPRIS ALT2 TSL 3 BASIC8.56□□□□□ -1.04
Npas1P97459 Ly6g6c-202ENSMUST00000173478 962 ntAPPRIS P2 TSL 1 (best) BASIC8.56□□□□□ -1.04
Npas1P97459 Gm23045-201ENSMUST00000175041 96 ntBASIC8.56□□□□□ -1.04
Npas1P97459 Gm8918-201ENSMUST00000190587 1087 ntBASIC8.56□□□□□ -1.04
Npas1P97459 Gm35584-201ENSMUST00000191767 641 ntTSL 5 BASIC8.56□□□□□ -1.04
Npas1P97459 Gm37458-201ENSMUST00000194055 410 ntBASIC8.56□□□□□ -1.04
Npas1P97459 Gm43163-201ENSMUST00000196571 442 ntBASIC8.56□□□□□ -1.04
Npas1P97459 4930430O22Rik-202ENSMUST00000202548 579 ntBASIC8.56□□□□□ -1.04
Npas1P97459 Gm9176-201ENSMUST00000219955 1120 ntBASIC8.56□□□□□ -1.04
Npas1P97459 Id2-203ENSMUST00000222667 958 ntBASIC8.56□□□□□ -1.04
Npas1P97459 Eaf2-201ENSMUST00000023537 849 ntAPPRIS ALT2 TSL 5 BASIC8.56□□□□□ -1.04
Npas1P97459 Smco2-201ENSMUST00000032433 1276 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Npas1P97459 Rpl34-202ENSMUST00000079085 480 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Npas1P97459 Arid1a-201ENSMUST00000008024 6486 ntAPPRIS ALT2 TSL 1 (best) BASIC8.56□□□□□ -1.04
Npas1P97459 Bmf-201ENSMUST00000090219 4642 ntAPPRIS P3 TSL 1 (best) BASIC8.56□□□□□ -1.04
Npas1P97459 5730419F03Rik-201ENSMUST00000190504 2092 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
Npas1P97459 Gm17213-201ENSMUST00000165161 1360 ntBASIC8.56□□□□□ -1.04
Npas1P97459 Ikzf2-204ENSMUST00000188110 1365 ntTSL 5 BASIC8.56□□□□□ -1.04
Npas1P97459 Ikzf2-208ENSMUST00000190855 1359 ntTSL 5 BASIC8.56□□□□□ -1.04
Npas1P97459 Pdgfra-202ENSMUST00000168162 6834 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Npas1P97459 Gfpt1-201ENSMUST00000032057 2286 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
Npas1P97459 Ube2f-203ENSMUST00000171165 5654 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Npas1P97459 Nlrc5-207ENSMUST00000211816 7578 ntAPPRIS P1 TSL 5 BASIC8.56□□□□□ -1.04
Npas1P97459 Ablim1-206ENSMUST00000111528 2481 ntTSL 5 BASIC8.56□□□□□ -1.04
Npas1P97459 Ints2-201ENSMUST00000018212 5906 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Npas1P97459 AC113282.5-201ENSMUST00000224330 1679 ntAPPRIS P1 BASIC8.56□□□□□ -1.04
Npas1P97459 Rep15-201ENSMUST00000036194 1662 ntAPPRIS P1 BASIC8.56□□□□□ -1.04
Npas1P97459 Platr7-201ENSMUST00000181466 1334 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
Npas1P97459 Ccdc162-201ENSMUST00000019955 1891 ntTSL 5 BASIC8.55□□□□□ -1.04
Npas1P97459 Copa-206ENSMUST00000135192 4622 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Npas1P97459 Greb1-201ENSMUST00000048064 7940 ntAPPRIS P3 TSL 1 (best) BASIC8.55□□□□□ -1.04
Npas1P97459 Gm8020-201ENSMUST00000170174 1406 ntAPPRIS P1 TSL 5 BASIC8.55□□□□□ -1.04
Npas1P97459 Zfp74-204ENSMUST00000108212 2060 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
Npas1P97459 Gm36752-201ENSMUST00000220527 1546 ntTSL 5 BASIC8.55□□□□□ -1.04
Npas1P97459 Kif23-201ENSMUST00000034815 3398 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Npas1P97459 Gm19410-201ENSMUST00000207505 6352 ntAPPRIS P1 TSL 5 BASIC8.55□□□□□ -1.04
Npas1P97459 Dclre1c-203ENSMUST00000102988 2469 ntAPPRIS P4 TSL 1 (best) BASIC8.55□□□□□ -1.04
Npas1P97459 2310057M21Rik-201ENSMUST00000059438 6773 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Npas1P97459 A230009B12Rik-202ENSMUST00000159602 1810 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
Npas1P97459 Cnksr3-202ENSMUST00000150282 2554 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
Npas1P97459 Prkar1a-203ENSMUST00000106677 3513 ntAPPRIS P1 TSL 5 BASIC8.55□□□□□ -1.04
Npas1P97459 Zfp568-204ENSMUST00000177931 2013 ntAPPRIS ALT2 TSL 5 BASIC8.55□□□□□ -1.04
Npas1P97459 Lrba-204ENSMUST00000194759 9379 ntAPPRIS ALT2 TSL 1 (best) BASIC8.55□□□□□ -1.04
Npas1P97459 Polr2i-203ENSMUST00000108193 488 ntTSL 3 BASIC8.55□□□□□ -1.04
Npas1P97459 Olfr1267-ps1-201ENSMUST00000118957 930 ntAPPRIS P1 BASIC8.55□□□□□ -1.04
Npas1P97459 Rpl28-ps1-201ENSMUST00000121497 414 ntBASIC8.55□□□□□ -1.04
Npas1P97459 E130006D01Rik-203ENSMUST00000137398 906 ntTSL 2 BASIC8.55□□□□□ -1.04
Npas1P97459 Gm10051-201ENSMUST00000145209 414 ntBASIC8.55□□□□□ -1.04
Npas1P97459 Gm16165-201ENSMUST00000160140 795 ntBASIC8.55□□□□□ -1.04
Npas1P97459 Cryge-202ENSMUST00000161960 690 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
Npas1P97459 Wdr53-204ENSMUST00000178573 1153 ntAPPRIS P1 TSL 5 BASIC8.55□□□□□ -1.04
Npas1P97459 Gm13272-201ENSMUST00000179425 811 ntAPPRIS P1 BASIC8.55□□□□□ -1.04
Npas1P97459 Gm19967-201ENSMUST00000179676 2138 ntTSL 5 BASIC8.55□□□□□ -1.04
Npas1P97459 9930004E17Rik-201ENSMUST00000180031 498 ntBASIC8.55□□□□□ -1.04
Npas1P97459 1110036E04Rik-201ENSMUST00000181151 777 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
Npas1P97459 Gm27231-201ENSMUST00000185191 551 ntTSL 5 BASIC8.55□□□□□ -1.04
Npas1P97459 Gm37390-201ENSMUST00000192452 872 ntBASIC8.55□□□□□ -1.04
Npas1P97459 Gm43634-201ENSMUST00000202671 675 ntTSL 3 BASIC8.55□□□□□ -1.04
Npas1P97459 Gm7207-201ENSMUST00000211575 1067 ntBASIC8.55□□□□□ -1.04
Npas1P97459 Gm4065-202ENSMUST00000218911 986 ntTSL 3 BASIC8.55□□□□□ -1.04
Npas1P97459 Gm32296-201ENSMUST00000220590 1057 ntTSL 3 BASIC8.55□□□□□ -1.04
Npas1P97459 AC129975.1-201ENSMUST00000224816 592 ntBASIC8.55□□□□□ -1.04
Npas1P97459 Spata24-201ENSMUST00000025209 701 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Npas1P97459 Cryba2-201ENSMUST00000006721 720 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Npas1P97459 Gm10263-201ENSMUST00000085163 300 ntBASIC8.55□□□□□ -1.04
Npas1P97459 Hist1h2bl-201ENSMUST00000091756 381 ntAPPRIS P1 BASIC8.55□□□□□ -1.04
Npas1P97459 Spata24-202ENSMUST00000096573 709 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
Npas1P97459 Atxn1-203ENSMUST00000180110 3901 ntAPPRIS ALT2 TSL 1 (best) BASIC8.55□□□□□ -1.04
Npas1P97459 Mfsd8-201ENSMUST00000026859 3151 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Npas1P97459 Casc1-208ENSMUST00000204105 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC8.55□□□□□ -1.04
Npas1P97459 Tpp2-207ENSMUST00000188313 4631 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Npas1P97459 Apex2-203ENSMUST00000112720 4742 ntAPPRIS P2 TSL 5 BASIC8.55□□□□□ -1.04
Npas1P97459 Ppid-201ENSMUST00000029382 1752 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Npas1P97459 Gm44037-201ENSMUST00000204816 1891 ntBASIC8.55□□□□□ -1.04
Npas1P97459 Tnfsf15-201ENSMUST00000062246 3347 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Npas1P97459 Disp1-202ENSMUST00000171366 4687 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Npas1P97459 Top3a-202ENSMUST00000102668 3542 ntAPPRIS ALT2 TSL 1 (best) BASIC8.55□□□□□ -1.04
Npas1P97459 Nrxn1-225ENSMUST00000197268 2280 ntTSL 3 BASIC8.55□□□□□ -1.04
Npas1P97459 Gpatch2l-201ENSMUST00000071106 3829 ntAPPRIS ALT2 TSL 1 (best) BASIC8.55□□□□□ -1.04
Npas1P97459 Ces1g-201ENSMUST00000044602 2388 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Npas1P97459 Champ1-201ENSMUST00000051870 4013 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Npas1P97459 Crat-203ENSMUST00000102855 4224 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Npas1P97459 Hs1bp3-201ENSMUST00000020927 2959 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Npas1P97459 Gm7405-201ENSMUST00000121476 1337 ntBASIC8.54□□□□□ -1.04
Npas1P97459 Lmo3-206ENSMUST00000163024 1331 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Npas1P97459 Tead3-207ENSMUST00000219703 1320 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
Npas1P97459 Gm9387-201ENSMUST00000098624 1320 ntBASIC8.54□□□□□ -1.04
Npas1P97459 Ano1-203ENSMUST00000121758 4552 ntAPPRIS P3 TSL 1 (best) BASIC8.54□□□□□ -1.04
Npas1P97459 Acbd5-212ENSMUST00000227663 4566 ntAPPRIS ALT2 BASIC8.54□□□□□ -1.04
Npas1P97459 Inpp5d-201ENSMUST00000042275 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC8.54□□□□□ -1.04
Npas1P97459 Gm26586-201ENSMUST00000181918 1745 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
Npas1P97459 AC158355.1-201ENSMUST00000215895 1705 ntBASIC8.54□□□□□ -1.04
Npas1P97459 Slfn3-201ENSMUST00000019130 1816 ntAPPRIS P2 TSL 1 (best) BASIC8.54□□□□□ -1.04
Npas1P97459 Pot1a-209ENSMUST00000166445 1923 ntAPPRIS P1 TSL 5 BASIC8.54□□□□□ -1.04
Npas1P97459 Zfp54-201ENSMUST00000007884 2300 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Npas1P97459 Cat-201ENSMUST00000028610 2613 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Npas1P97459 Padi3-202ENSMUST00000172098 3310 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
Retrieved 100 of 76,532 protein–RNA pairs in 52.9 ms