Protein–RNA interactions for Protein: P62960

Ybx1, Nuclease-sensitive element-binding protein 1, mousemouse

Known RBP Predictions only

Length 322 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ybx1P62960 Gimap8-202ENSMUST00000203083 2579 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Ybx1P62960 Cd74-203ENSMUST00000167610 1345 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Ybx1P62960 Zfp418-201ENSMUST00000051435 2725 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Ybx1P62960 Tbpl1-202ENSMUST00000127698 2873 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Ybx1P62960 Ppef2-202ENSMUST00000201130 2878 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Ybx1P62960 Cdcp2-201ENSMUST00000062495 2611 ntAPPRIS P2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Ybx1P62960 Ophn1-201ENSMUST00000033560 7170 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Ybx1P62960 Srp54b-202ENSMUST00000218879 3642 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Ybx1P62960 BC035947-201ENSMUST00000170511 3063 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Ybx1P62960 Ntrk2-202ENSMUST00000109838 6846 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Ybx1P62960 Gm32200-201ENSMUST00000192778 2385 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Ybx1P62960 Rnf121-203ENSMUST00000106953 2545 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Ybx1P62960 Gm15943-201ENSMUST00000147638 3821 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Ybx1P62960 Ntrk3-205ENSMUST00000193002 2678 ntAPPRIS ALT2 TSL 5 BASIC10.54□□□□□ -0.72
Ybx1P62960 Pigq-218ENSMUST00000208043 2987 ntAPPRIS P3 TSL 5 BASIC10.54□□□□□ -0.72
Ybx1P62960 Xlr4c-201ENSMUST00000068551 1500 ntAPPRIS P1 TSL 5 BASIC10.54□□□□□ -0.72
Ybx1P62960 Tex9-214ENSMUST00000184831 1652 ntAPPRIS ALT2 TSL 5 BASIC10.54□□□□□ -0.72
Ybx1P62960 Gm16429-202ENSMUST00000201400 1848 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Ybx1P62960 Gm7971-201ENSMUST00000086950 1848 ntAPPRIS P1 TSL 5 BASIC10.54□□□□□ -0.72
Ybx1P62960 Gm12940-202ENSMUST00000137236 1970 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Ybx1P62960 Ctse-201ENSMUST00000073350 2126 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Ybx1P62960 Msln-201ENSMUST00000075884 2114 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Ybx1P62960 Capn8-201ENSMUST00000048941 2406 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Ybx1P62960 Kcnip3-203ENSMUST00000103215 2732 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Ybx1P62960 Kcnip3-201ENSMUST00000028850 2728 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Ybx1P62960 Snd1-206ENSMUST00000167201 3781 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Ybx1P62960 Fgl2-201ENSMUST00000035799 3788 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Ybx1P62960 Fbxl5-202ENSMUST00000087465 4237 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Ybx1P62960 Map4-205ENSMUST00000165876 5573 ntAPPRIS ALT2 TSL 5 BASIC10.54□□□□□ -0.72
Ybx1P62960 Grb2-204ENSMUST00000106499 2333 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Ybx1P62960 Tulp2-203ENSMUST00000107758 1597 ntTSL 5 BASIC10.54□□□□□ -0.72
Ybx1P62960 Gsg1-204ENSMUST00000111911 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Ybx1P62960 Lrrc49-204ENSMUST00000114034 2779 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Ybx1P62960 Gm13197-201ENSMUST00000117204 225 ntBASIC10.54□□□□□ -0.72
Ybx1P62960 Gm7061-201ENSMUST00000118127 1416 ntBASIC10.54□□□□□ -0.72
Ybx1P62960 Gm13002-201ENSMUST00000119286 682 ntBASIC10.54□□□□□ -0.72
Ybx1P62960 Gm11573-201ENSMUST00000119956 394 ntBASIC10.54□□□□□ -0.72
Ybx1P62960 Gm13781-201ENSMUST00000124153 492 ntTSL 2 BASIC10.54□□□□□ -0.72
Ybx1P62960 4930538E20Rik-201ENSMUST00000131383 546 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Ybx1P62960 Faap24-203ENSMUST00000154597 831 ntAPPRIS P1 TSL 3 BASIC10.54□□□□□ -0.72
Ybx1P62960 Gm16581-201ENSMUST00000160730 991 ntBASIC10.54□□□□□ -0.72
Ybx1P62960 Gm17225-201ENSMUST00000172051 497 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Ybx1P62960 Gm25694-201ENSMUST00000175448 282 ntBASIC10.54□□□□□ -0.72
Ybx1P62960 Fam47e-205ENSMUST00000175974 1016 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Ybx1P62960 Gm23521-201ENSMUST00000177845 110 ntBASIC10.54□□□□□ -0.72
Ybx1P62960 Gm26594-201ENSMUST00000180383 1094 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Ybx1P62960 Gm29135-201ENSMUST00000188411 612 ntTSL 5 BASIC10.54□□□□□ -0.72
Ybx1P62960 Gm21083-201ENSMUST00000188807 1141 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Ybx1P62960 1700019D03Rik-206ENSMUST00000190831 653 ntAPPRIS P1 TSL 2 BASIC10.54□□□□□ -0.72
Ybx1P62960 B130024G19Rik-204ENSMUST00000191084 634 ntTSL 5 BASIC10.54□□□□□ -0.72
Ybx1P62960 Ift22-204ENSMUST00000200153 670 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Ybx1P62960 Gm44709-201ENSMUST00000207649 448 ntTSL 5 BASIC10.54□□□□□ -0.72
Ybx1P62960 Gm18646-201ENSMUST00000212240 1063 ntBASIC10.54□□□□□ -0.72
Ybx1P62960 Gm8960-201ENSMUST00000219787 788 ntBASIC10.54□□□□□ -0.72
Ybx1P62960 Gm32296-201ENSMUST00000220590 1057 ntTSL 3 BASIC10.54□□□□□ -0.72
Ybx1P62960 Slfn1-201ENSMUST00000037994 1864 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Ybx1P62960 Tceal9-201ENSMUST00000048687 1019 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Ybx1P62960 Uaca-201ENSMUST00000050183 4428 ntAPPRIS P2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Ybx1P62960 Vmn1r212-201ENSMUST00000095960 1164 ntAPPRIS P1 BASIC10.54□□□□□ -0.72
Ybx1P62960 Esp6-201ENSMUST00000097324 658 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Ybx1P62960 March10-204ENSMUST00000138977 2979 ntAPPRIS P1 TSL 5 BASIC10.54□□□□□ -0.72
Ybx1P62960 Gm37242-201ENSMUST00000191873 2085 ntBASIC10.54□□□□□ -0.72
Ybx1P62960 Ubap2l-203ENSMUST00000090908 3629 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Ybx1P62960 Gm13615-201ENSMUST00000120242 1612 ntBASIC10.54□□□□□ -0.72
Ybx1P62960 Pnpla6-201ENSMUST00000004681 4438 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Ybx1P62960 Abhd4-201ENSMUST00000041197 2401 ntAPPRIS P4 TSL 1 (best) BASIC10.54□□□□□ -0.72
Ybx1P62960 Zfp518b-203ENSMUST00000179555 6816 ntAPPRIS P1 TSL 2 BASIC10.54□□□□□ -0.72
Ybx1P62960 Tstd2-202ENSMUST00000107772 3726 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Ybx1P62960 Anks1b-203ENSMUST00000099368 2799 ntTSL 5 BASIC10.54□□□□□ -0.72
Ybx1P62960 Pcgf5-202ENSMUST00000071267 1508 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Ybx1P62960 BC067074-203ENSMUST00000136755 8274 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
Ybx1P62960 AC147366.2-201ENSMUST00000226859 2038 ntBASIC10.53□□□□□ -0.72
Ybx1P62960 Ccdc24-206ENSMUST00000164853 3990 ntTSL 2 BASIC10.53□□□□□ -0.72
Ybx1P62960 Corin-202ENSMUST00000167460 4639 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Ybx1P62960 Gm29151-201ENSMUST00000196669 2513 ntTSL 5 BASIC10.53□□□□□ -0.72
Ybx1P62960 Arhgap36-202ENSMUST00000114904 3033 ntAPPRIS P2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Ybx1P62960 Hmg20a-205ENSMUST00000215269 1700 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Ybx1P62960 Pabpc5-202ENSMUST00000113366 2243 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
Ybx1P62960 Zbtb40-201ENSMUST00000049583 7192 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Ybx1P62960 Tenm3-206ENSMUST00000190840 8663 ntAPPRIS ALT1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Ybx1P62960 C8b-202ENSMUST00000065072 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Ybx1P62960 Clp1-203ENSMUST00000165219 2564 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Ybx1P62960 Ikbkb-201ENSMUST00000033939 3580 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Ybx1P62960 Brd3-201ENSMUST00000028282 5419 ntAPPRIS P3 TSL 5 BASIC10.53□□□□□ -0.72
Ybx1P62960 Rgs8-201ENSMUST00000041776 8474 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Ybx1P62960 Phf21a-209ENSMUST00000111297 6188 ntAPPRIS ALT2 TSL 5 BASIC10.53□□□□□ -0.72
Ybx1P62960 Phf21a-201ENSMUST00000044036 6187 ntAPPRIS ALT2 TSL 5 BASIC10.53□□□□□ -0.72
Ybx1P62960 Rpain-202ENSMUST00000108529 282 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Ybx1P62960 Gm17193-201ENSMUST00000116345 691 ntTSL 5 BASIC10.53□□□□□ -0.72
Ybx1P62960 Gm15264-201ENSMUST00000118050 502 ntBASIC10.53□□□□□ -0.72
Ybx1P62960 Nsa2-ps2-201ENSMUST00000120785 773 ntBASIC10.53□□□□□ -0.72
Ybx1P62960 2810403D21Rik-204ENSMUST00000144421 747 ntTSL 3 BASIC10.53□□□□□ -0.72
Ybx1P62960 Gm17120-201ENSMUST00000164734 743 ntTSL 3 BASIC10.53□□□□□ -0.72
Ybx1P62960 Rps28-205ENSMUST00000173844 382 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Ybx1P62960 Gm5627-201ENSMUST00000178539 931 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Ybx1P62960 Gm26610-201ENSMUST00000181529 1024 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Ybx1P62960 Gm26957-201ENSMUST00000182645 977 ntBASIC10.53□□□□□ -0.72
Ybx1P62960 Gm28809-201ENSMUST00000187542 782 ntTSL 5 BASIC10.53□□□□□ -0.72
Ybx1P62960 Gm38004-201ENSMUST00000192972 357 ntBASIC10.53□□□□□ -0.72
Ybx1P62960 Gm8083-201ENSMUST00000203976 475 ntBASIC10.53□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 41.5 ms