Protein–RNA interactions for Protein: P62311

Lsm3, U6 snRNA-associated Sm-like protein LSm3, mousemouse

Known RBP Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm3P62311 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Lsm3P62311 Tro-208ENSMUST00000164071 891 ntAPPRIS ALT2 TSL 5 BASIC9.19□□□□□ -0.94
Lsm3P62311 Tmcc1-205ENSMUST00000173031 1024 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Lsm3P62311 Gm25890-201ENSMUST00000177643 165 ntBASIC9.19□□□□□ -0.94
Lsm3P62311 Rnu1b2-201ENSMUST00000178073 165 ntBASIC9.19□□□□□ -0.94
Lsm3P62311 Rnu1b1-201ENSMUST00000178250 165 ntBASIC9.19□□□□□ -0.94
Lsm3P62311 Gm22614-201ENSMUST00000178300 165 ntBASIC9.19□□□□□ -0.94
Lsm3P62311 Mir8091-201ENSMUST00000183602 139 ntBASIC9.19□□□□□ -0.94
Lsm3P62311 Swi5-207ENSMUST00000183946 768 ntAPPRIS P3 TSL 1 (best) BASIC9.19□□□□□ -0.94
Lsm3P62311 Mir8109-201ENSMUST00000184375 117 ntBASIC9.19□□□□□ -0.94
Lsm3P62311 Gm29418-201ENSMUST00000186162 647 ntTSL 5 BASIC9.19□□□□□ -0.94
Lsm3P62311 Gm37362-201ENSMUST00000194567 634 ntTSL 5 BASIC9.19□□□□□ -0.94
Lsm3P62311 9530034A14Rik-201ENSMUST00000197919 1083 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Lsm3P62311 Ccdc12-201ENSMUST00000019803 834 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Lsm3P62311 Gm7118-201ENSMUST00000200167 1003 ntBASIC9.19□□□□□ -0.94
Lsm3P62311 Gm43634-201ENSMUST00000202671 675 ntTSL 3 BASIC9.19□□□□□ -0.94
Lsm3P62311 Gm44698-201ENSMUST00000207382 384 ntTSL 5 BASIC9.19□□□□□ -0.94
Lsm3P62311 Gm33979-201ENSMUST00000219486 691 ntTSL 5 BASIC9.19□□□□□ -0.94
Lsm3P62311 Immp1l-201ENSMUST00000037499 955 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Lsm3P62311 Gm22042-201ENSMUST00000082989 165 ntBASIC9.19□□□□□ -0.94
Lsm3P62311 Gm26110-201ENSMUST00000083971 165 ntBASIC9.19□□□□□ -0.94
Lsm3P62311 Hist1h2bl-201ENSMUST00000091756 381 ntAPPRIS P1 BASIC9.19□□□□□ -0.94
Lsm3P62311 Pcgf1-201ENSMUST00000092614 866 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Lsm3P62311 Gm10775-201ENSMUST00000099425 1203 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Lsm3P62311 Tecpr2-202ENSMUST00000169597 7780 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Lsm3P62311 Gm38252-201ENSMUST00000192701 2616 ntBASIC9.19□□□□□ -0.94
Lsm3P62311 Spata17-201ENSMUST00000027908 1303 ntAPPRIS P3 TSL 2 BASIC9.19□□□□□ -0.94
Lsm3P62311 Gm15965-201ENSMUST00000123318 1428 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Lsm3P62311 Gm8020-201ENSMUST00000170174 1406 ntAPPRIS P1 TSL 5 BASIC9.19□□□□□ -0.94
Lsm3P62311 Mertk-201ENSMUST00000014505 4302 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Lsm3P62311 Wdfy4-202ENSMUST00000130509 10158 ntAPPRIS ALT2 TSL 5 BASIC9.19□□□□□ -0.94
Lsm3P62311 Disp1-202ENSMUST00000171366 4687 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Lsm3P62311 Trpc4-205ENSMUST00000200048 3170 ntAPPRIS ALT2 TSL 1 (best) BASIC9.19□□□□□ -0.94
Lsm3P62311 Dhx35-201ENSMUST00000029186 3212 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Lsm3P62311 Nucb1-210ENSMUST00000211765 4853 ntAPPRIS P3 TSL 1 (best) BASIC9.19□□□□□ -0.94
Lsm3P62311 Cfap58-201ENSMUST00000066308 3345 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Lsm3P62311 Nox1-202ENSMUST00000113275 1694 ntTSL 5 BASIC9.19□□□□□ -0.94
Lsm3P62311 Acox3-201ENSMUST00000068563 3386 ntAPPRIS ALT2 TSL 1 (best) BASIC9.19□□□□□ -0.94
Lsm3P62311 Vps11-201ENSMUST00000034644 3536 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Lsm3P62311 Rnf43-201ENSMUST00000040089 3670 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Lsm3P62311 Stk11ip-202ENSMUST00000113553 4153 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Lsm3P62311 A630001O12Rik-201ENSMUST00000212914 2182 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Lsm3P62311 Ddah1-202ENSMUST00000120310 2291 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Lsm3P62311 Gm43817-201ENSMUST00000196459 2262 ntBASIC9.19□□□□□ -0.94
Lsm3P62311 Tirap-201ENSMUST00000175765 4589 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Lsm3P62311 Olfr1276-203ENSMUST00000218065 5052 ntAPPRIS P1 TSL 5 BASIC9.19□□□□□ -0.94
Lsm3P62311 Kat6b-209ENSMUST00000182964 7699 ntAPPRIS ALT2 TSL 5 BASIC9.18□□□□□ -0.94
Lsm3P62311 L1cam-203ENSMUST00000114430 5126 ntAPPRIS ALT2 TSL 5 BASIC9.18□□□□□ -0.94
Lsm3P62311 Hcfc1-201ENSMUST00000033761 8138 ntAPPRIS P2 TSL 1 (best) BASIC9.18□□□□□ -0.94
Lsm3P62311 Muc5ac-201ENSMUST00000041924 8256 ntAPPRIS P2 TSL 5 BASIC9.18□□□□□ -0.94
Lsm3P62311 Spag9-205ENSMUST00000103168 6840 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Lsm3P62311 Fhod1-201ENSMUST00000014922 3928 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Lsm3P62311 Lamb3-201ENSMUST00000016315 4056 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Lsm3P62311 Tax1bp3-202ENSMUST00000108477 1153 ntTSL 5 BASIC9.18□□□□□ -0.94
Lsm3P62311 Rad18-204ENSMUST00000113182 2220 ntAPPRIS ALT2 TSL 5 BASIC9.18□□□□□ -0.94
Lsm3P62311 Iqcg-202ENSMUST00000115100 2916 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Lsm3P62311 Gm13328-201ENSMUST00000120816 1020 ntBASIC9.18□□□□□ -0.94
Lsm3P62311 Gm11952-201ENSMUST00000121172 821 ntBASIC9.18□□□□□ -0.94
Lsm3P62311 Gm11424-201ENSMUST00000121929 829 ntBASIC9.18□□□□□ -0.94
Lsm3P62311 Dnajb6-202ENSMUST00000012734 1024 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Lsm3P62311 Gm13091-201ENSMUST00000128800 469 ntTSL 5 BASIC9.18□□□□□ -0.94
Lsm3P62311 Hmgn1-202ENSMUST00000133885 261 ntTSL 5 BASIC9.18□□□□□ -0.94
Lsm3P62311 Syna-201ENSMUST00000149604 2026 ntAPPRIS P1 BASIC9.18□□□□□ -0.94
Lsm3P62311 Gm13583-202ENSMUST00000151931 1476 ntTSL 2 BASIC9.18□□□□□ -0.94
Lsm3P62311 Gm23699-201ENSMUST00000158835 135 ntBASIC9.18□□□□□ -0.94
Lsm3P62311 Agtpbp1-213ENSMUST00000167096 508 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Lsm3P62311 Pex3-207ENSMUST00000170376 1381 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Lsm3P62311 U2af1l4-234ENSMUST00000171850 564 ntTSL 5 BASIC9.18□□□□□ -0.94
Lsm3P62311 Gigyf2-205ENSMUST00000172794 4029 ntAPPRIS ALT2 TSL 5 BASIC9.18□□□□□ -0.94
Lsm3P62311 Gm13290-201ENSMUST00000177806 968 ntAPPRIS P1 BASIC9.18□□□□□ -0.94
Lsm3P62311 Epn2-213ENSMUST00000179936 4452 ntAPPRIS ALT2 TSL 1 (best) BASIC9.18□□□□□ -0.94
Lsm3P62311 Gm26911-201ENSMUST00000181770 1737 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Lsm3P62311 Gm9146-201ENSMUST00000182254 1006 ntBASIC9.18□□□□□ -0.94
Lsm3P62311 Bloc1s2-ps-201ENSMUST00000183232 432 ntBASIC9.18□□□□□ -0.94
Lsm3P62311 Iqcf3-202ENSMUST00000186668 633 ntAPPRIS ALT2 TSL 5 BASIC9.18□□□□□ -0.94
Lsm3P62311 Gm20089-201ENSMUST00000192391 2084 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Lsm3P62311 Gm38059-201ENSMUST00000193746 1999 ntBASIC9.18□□□□□ -0.94
Lsm3P62311 Gm38266-201ENSMUST00000194931 421 ntBASIC9.18□□□□□ -0.94
Lsm3P62311 Gm8684-201ENSMUST00000195078 1564 ntBASIC9.18□□□□□ -0.94
Lsm3P62311 Gm37707-201ENSMUST00000195309 325 ntTSL 3 BASIC9.18□□□□□ -0.94
Lsm3P62311 Gm44270-201ENSMUST00000203084 1234 ntBASIC9.18□□□□□ -0.94
Lsm3P62311 Gm32914-201ENSMUST00000203815 2228 ntBASIC9.18□□□□□ -0.94
Lsm3P62311 Gm44168-201ENSMUST00000204835 3539 ntBASIC9.18□□□□□ -0.94
Lsm3P62311 Olfr601-202ENSMUST00000210431 2266 ntAPPRIS P1 TSL 3 BASIC9.18□□□□□ -0.94
Lsm3P62311 Gm19046-201ENSMUST00000221263 1298 ntBASIC9.18□□□□□ -0.94
Lsm3P62311 Gm6353-201ENSMUST00000223234 1051 ntBASIC9.18□□□□□ -0.94
Lsm3P62311 AC154435.1-201ENSMUST00000223938 959 ntBASIC9.18□□□□□ -0.94
Lsm3P62311 Mtbp-201ENSMUST00000022998 3144 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Lsm3P62311 C330018D20Rik-201ENSMUST00000025488 2400 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Lsm3P62311 Fkbpl-201ENSMUST00000036720 1270 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Lsm3P62311 Phf8-201ENSMUST00000046950 5728 ntAPPRIS ALT2 TSL 5 BASIC9.18□□□□□ -0.94
Lsm3P62311 4930533K18Rik-201ENSMUST00000058942 1259 ntTSL 5 BASIC9.18□□□□□ -0.94
Lsm3P62311 Oprl1-201ENSMUST00000071585 2999 ntAPPRIS P3 TSL 1 (best) BASIC9.18□□□□□ -0.94
Lsm3P62311 Olfr314-201ENSMUST00000076393 1131 ntAPPRIS P1 BASIC9.18□□□□□ -0.94
Lsm3P62311 Gm7589-201ENSMUST00000085631 534 ntBASIC9.18□□□□□ -0.94
Lsm3P62311 Acsl6-205ENSMUST00000094194 2554 ntAPPRIS ALT1 TSL 5 BASIC9.18□□□□□ -0.94
Lsm3P62311 Nlrc5-202ENSMUST00000098489 1721 ntTSL 5 BASIC9.18□□□□□ -0.94
Lsm3P62311 Chrm1-201ENSMUST00000035444 4159 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Lsm3P62311 Gm28557-203ENSMUST00000186303 3886 ntAPPRIS P1 TSL 2 BASIC9.18□□□□□ -0.94
Lsm3P62311 Plec-208ENSMUST00000080857 14959 ntTSL 5 BASIC9.18□□□□□ -0.94
Retrieved 100 of 76,532 protein–RNA pairs in 68.7 ms