Protein–RNA interactions for Protein: P52194

Clgn, Calmegin, mousemouse

Predictions only

Length 611 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClgnP52194 Gm23612-201ENSMUST00000103823 110 ntBASIC10.52□□□□□ -0.73
ClgnP52194 Bex3-203ENSMUST00000113113 766 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.73
ClgnP52194 Ice2-202ENSMUST00000117246 1201 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
ClgnP52194 Prss46-201ENSMUST00000119427 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
ClgnP52194 Gm6758-201ENSMUST00000119643 1055 ntBASIC10.52□□□□□ -0.73
ClgnP52194 Snrnp25-202ENSMUST00000121182 659 ntAPPRIS ALT2 TSL 3 BASIC10.52□□□□□ -0.73
ClgnP52194 4930594O21Rik-201ENSMUST00000129750 629 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
ClgnP52194 Gm15507-201ENSMUST00000133523 592 ntTSL 5 BASIC10.52□□□□□ -0.73
ClgnP52194 4930583K01Rik-201ENSMUST00000138180 925 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
ClgnP52194 Gm13026-201ENSMUST00000140113 608 ntTSL 5 BASIC10.52□□□□□ -0.73
ClgnP52194 Prss46-202ENSMUST00000176403 1257 ntAPPRIS P2 TSL 1 (best) BASIC10.52□□□□□ -0.73
ClgnP52194 Gm23576-201ENSMUST00000179918 110 ntBASIC10.52□□□□□ -0.73
ClgnP52194 1700017I07Rik-201ENSMUST00000184823 462 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
ClgnP52194 Gm8918-201ENSMUST00000190587 1087 ntBASIC10.52□□□□□ -0.73
ClgnP52194 Gm38210-201ENSMUST00000191944 809 ntBASIC10.52□□□□□ -0.73
ClgnP52194 Gm37723-201ENSMUST00000194480 565 ntBASIC10.52□□□□□ -0.73
ClgnP52194 Gm7319-201ENSMUST00000210047 778 ntBASIC10.52□□□□□ -0.73
ClgnP52194 AC120394.2-201ENSMUST00000213905 702 ntTSL 5 BASIC10.52□□□□□ -0.73
ClgnP52194 Gm9487-201ENSMUST00000216600 472 ntBASIC10.52□□□□□ -0.73
ClgnP52194 E230034D01Rik-203ENSMUST00000217357 1159 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
ClgnP52194 AC154407.1-201ENSMUST00000226777 526 ntBASIC10.52□□□□□ -0.73
ClgnP52194 AC161172.1-201ENSMUST00000227801 486 ntBASIC10.52□□□□□ -0.73
ClgnP52194 Sun5-201ENSMUST00000028982 1157 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
ClgnP52194 Mcts2-201ENSMUST00000062148 917 ntAPPRIS P1 BASIC10.52□□□□□ -0.73
ClgnP52194 Fbxo32-201ENSMUST00000022986 6976 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
ClgnP52194 Smok4a-201ENSMUST00000074512 1455 ntBASIC10.52□□□□□ -0.73
ClgnP52194 Gm43915-201ENSMUST00000203013 5037 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
ClgnP52194 Zfp330-201ENSMUST00000034147 1675 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
ClgnP52194 Pik3c3-202ENSMUST00000115811 3084 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
ClgnP52194 Msh3-202ENSMUST00000185852 3946 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.73
ClgnP52194 BC052040-201ENSMUST00000110918 2735 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
ClgnP52194 Oc90-201ENSMUST00000060522 1909 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.73
ClgnP52194 Gm42858-201ENSMUST00000202512 1704 ntBASIC10.52□□□□□ -0.73
ClgnP52194 Tekt2-202ENSMUST00000102616 1542 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.73
ClgnP52194 Gpr63-201ENSMUST00000038920 2370 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
ClgnP52194 Gm2974-201ENSMUST00000164512 1990 ntAPPRIS P5 TSL 5 BASIC10.52□□□□□ -0.73
ClgnP52194 Cntrl-206ENSMUST00000113037 5970 ntTSL 5 BASIC10.52□□□□□ -0.73
ClgnP52194 Cenpo-202ENSMUST00000111169 1550 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
ClgnP52194 Ccr6-202ENSMUST00000164411 1553 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
ClgnP52194 Fblim1-203ENSMUST00000105785 3091 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
ClgnP52194 Gm37242-201ENSMUST00000191873 2085 ntBASIC10.51□□□□□ -0.73
ClgnP52194 D030018L15Rik-202ENSMUST00000139808 1859 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
ClgnP52194 Gm45847-201ENSMUST00000209402 1880 ntTSL 3 BASIC10.51□□□□□ -0.73
ClgnP52194 Rps6ka6-204ENSMUST00000113428 4135 ntAPPRIS ALT2 TSL 5 BASIC10.51□□□□□ -0.73
ClgnP52194 Gm15604-201ENSMUST00000118350 1456 ntBASIC10.51□□□□□ -0.73
ClgnP52194 Gm21142-201ENSMUST00000179999 2604 ntBASIC10.51□□□□□ -0.73
ClgnP52194 Rps9-204ENSMUST00000108625 914 ntAPPRIS P1 TSL 2 BASIC10.51□□□□□ -0.73
ClgnP52194 Crygc-202ENSMUST00000114064 612 ntAPPRIS ALT1 TSL 1 (best) BASIC10.51□□□□□ -0.73
ClgnP52194 Camk2a-204ENSMUST00000115295 979 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
ClgnP52194 Smim11-202ENSMUST00000118064 782 ntAPPRIS P1 TSL 2 BASIC10.51□□□□□ -0.73
ClgnP52194 Gm12489-201ENSMUST00000119364 148 ntBASIC10.51□□□□□ -0.73
ClgnP52194 Gm14993-201ENSMUST00000121180 164 ntBASIC10.51□□□□□ -0.73
ClgnP52194 Gm12176-201ENSMUST00000121420 875 ntBASIC10.51□□□□□ -0.73
ClgnP52194 Gm25288-201ENSMUST00000122800 265 ntBASIC10.51□□□□□ -0.73
ClgnP52194 Lrrc75aos2-202ENSMUST00000128647 1227 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
ClgnP52194 Gm11670-201ENSMUST00000143435 511 ntTSL 2 BASIC10.51□□□□□ -0.73
ClgnP52194 Taar8c-201ENSMUST00000170267 1035 ntAPPRIS P1 BASIC10.51□□□□□ -0.73
ClgnP52194 9330179D12Rik-201ENSMUST00000180569 1105 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
ClgnP52194 6720483E21Rik-201ENSMUST00000181654 1120 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
ClgnP52194 Gm27438-201ENSMUST00000183480 110 ntBASIC10.51□□□□□ -0.73
ClgnP52194 Diablo-210ENSMUST00000200247 748 ntTSL 5 BASIC10.51□□□□□ -0.73
ClgnP52194 Gm43969-201ENSMUST00000204833 535 ntBASIC10.51□□□□□ -0.73
ClgnP52194 Stt3a-209ENSMUST00000217599 285 ntTSL 5 BASIC10.51□□□□□ -0.73
ClgnP52194 Gm18596-201ENSMUST00000218133 843 ntAPPRIS P1 BASIC10.51□□□□□ -0.73
ClgnP52194 Gm46224-201ENSMUST00000220221 1242 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
ClgnP52194 Gm9758-201ENSMUST00000035980 1167 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
ClgnP52194 Taar8a-201ENSMUST00000051133 1035 ntAPPRIS P1 BASIC10.51□□□□□ -0.73
ClgnP52194 Olfr1339-201ENSMUST00000094832 948 ntAPPRIS P1 BASIC10.51□□□□□ -0.73
ClgnP52194 Pla2g5-203ENSMUST00000102512 1976 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
ClgnP52194 4732487G21Rik-201ENSMUST00000181495 2664 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
ClgnP52194 Gm44445-201ENSMUST00000204075 2683 ntBASIC10.51□□□□□ -0.73
ClgnP52194 Capn3-202ENSMUST00000028749 3174 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
ClgnP52194 Ido2-201ENSMUST00000121992 2452 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
ClgnP52194 0610030E20Rik-201ENSMUST00000077783 4605 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
ClgnP52194 Prdm10-204ENSMUST00000215499 6772 ntAPPRIS ALT2 TSL 5 BASIC10.51□□□□□ -0.73
ClgnP52194 Irf9-203ENSMUST00000134863 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
ClgnP52194 Rad50-201ENSMUST00000020649 5153 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
ClgnP52194 Rab30-202ENSMUST00000107179 1304 ntTSL 5 BASIC10.51□□□□□ -0.73
ClgnP52194 Cxcl11-201ENSMUST00000077820 1581 ntAPPRIS P1 TSL 5 BASIC10.51□□□□□ -0.73
ClgnP52194 Slc2a1-201ENSMUST00000030398 3260 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
ClgnP52194 Lrrc57-201ENSMUST00000102496 1848 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
ClgnP52194 Nrap-205ENSMUST00000167239 4752 ntAPPRIS ALT2 TSL 5 BASIC10.51□□□□□ -0.73
ClgnP52194 Itga10-201ENSMUST00000029744 5044 ntAPPRIS ALT2 TSL 5 BASIC10.51□□□□□ -0.73
ClgnP52194 Wnk4-201ENSMUST00000103108 4117 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
ClgnP52194 Tmprss11c-201ENSMUST00000059424 1615 ntAPPRIS P2 TSL 1 (best) BASIC10.51□□□□□ -0.73
ClgnP52194 Syncrip-208ENSMUST00000174282 3404 ntAPPRIS ALT1 TSL 1 (best) BASIC10.51□□□□□ -0.73
ClgnP52194 Gm26947-201ENSMUST00000182497 2929 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
ClgnP52194 Olfr223-202ENSMUST00000215626 1695 ntAPPRIS P1 TSL 5 BASIC10.5□□□□□ -0.73
ClgnP52194 Itgax-201ENSMUST00000033053 4046 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
ClgnP52194 Prr16-201ENSMUST00000116639 2224 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
ClgnP52194 Gm42979-201ENSMUST00000196287 2228 ntBASIC10.5□□□□□ -0.73
ClgnP52194 Ttc28-206ENSMUST00000156290 10688 ntAPPRIS P2 TSL 5 BASIC10.5□□□□□ -0.73
ClgnP52194 Tmem255a-202ENSMUST00000089054 3311 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
ClgnP52194 Cd3e-201ENSMUST00000102832 1462 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
ClgnP52194 Nudcd3-201ENSMUST00000066496 3927 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
ClgnP52194 Il1r1-201ENSMUST00000027241 5819 ntAPPRIS P3 TSL 1 (best) BASIC10.5□□□□□ -0.73
ClgnP52194 Upk1b-201ENSMUST00000057767 1769 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
ClgnP52194 Grik4-201ENSMUST00000034515 3413 ntAPPRIS P1 TSL 5 BASIC10.5□□□□□ -0.73
ClgnP52194 Gfi1b-204ENSMUST00000164290 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
ClgnP52194 Mir291b-201ENSMUST00000104838 79 ntBASIC10.5□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 45.3 ms