Protein–RNA interactions for Protein: P31041

Cd28, T-cell-specific surface glycoprotein CD28, mousemouse

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd28P31041 Zfp655-202ENSMUST00000167316 4104 ntAPPRIS P3 TSL 1 (best) BASIC8.93□□□□□ -0.98
Cd28P31041 Psat1-201ENSMUST00000025542 2617 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Cd28P31041 Ctnnd1-220ENSMUST00000111694 6362 ntAPPRIS P5 TSL 5 BASIC8.93□□□□□ -0.98
Cd28P31041 Ccdc33-210ENSMUST00000215944 3012 ntAPPRIS ALT2 TSL 5 BASIC8.93□□□□□ -0.98
Cd28P31041 Rac2-201ENSMUST00000043214 3036 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Cd28P31041 4930570G19Rik-201ENSMUST00000139363 3112 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
Cd28P31041 Rnf165-201ENSMUST00000026494 7300 ntAPPRIS P1 TSL 5 BASIC8.93□□□□□ -0.98
Cd28P31041 Prickle2-201ENSMUST00000032093 7754 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
Cd28P31041 AU018091-201ENSMUST00000171749 3449 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Cd28P31041 Hk1-201ENSMUST00000072357 3639 ntAPPRIS P4 TSL 5 BASIC8.93□□□□□ -0.98
Cd28P31041 Sectm1a-204ENSMUST00000106120 1020 ntAPPRIS ALT2 TSL 5 BASIC8.93□□□□□ -0.98
Cd28P31041 Krtap4-16-201ENSMUST00000107437 954 ntAPPRIS P1 BASIC8.93□□□□□ -0.98
Cd28P31041 Gm5764-201ENSMUST00000118817 885 ntBASIC8.93□□□□□ -0.98
Cd28P31041 Gm13073-201ENSMUST00000134059 486 ntTSL 3 BASIC8.93□□□□□ -0.98
Cd28P31041 Gm12688-201ENSMUST00000136525 701 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
Cd28P31041 E130006D01Rik-203ENSMUST00000137398 906 ntTSL 2 BASIC8.93□□□□□ -0.98
Cd28P31041 Gm6408-201ENSMUST00000179032 1171 ntAPPRIS P1 TSL 5 BASIC8.93□□□□□ -0.98
Cd28P31041 Gm7719-201ENSMUST00000182374 975 ntBASIC8.93□□□□□ -0.98
Cd28P31041 Abhd14a-204ENSMUST00000185334 1109 ntAPPRIS P1 TSL 5 BASIC8.93□□□□□ -0.98
Cd28P31041 Dydc1-203ENSMUST00000189865 995 ntAPPRIS P2 TSL 1 (best) BASIC8.93□□□□□ -0.98
Cd28P31041 Gm29040-201ENSMUST00000189899 1188 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
Cd28P31041 Gm12057-202ENSMUST00000189990 882 ntAPPRIS P1 TSL 5 BASIC8.93□□□□□ -0.98
Cd28P31041 Med8-201ENSMUST00000019229 1145 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Cd28P31041 Bcl2l12-205ENSMUST00000207755 605 ntAPPRIS ALT2 TSL 2 BASIC8.93□□□□□ -0.98
Cd28P31041 Gm39288-201ENSMUST00000210554 446 ntBASIC8.93□□□□□ -0.98
Cd28P31041 1700026F02Rik-203ENSMUST00000211950 1082 ntTSL 5 BASIC8.93□□□□□ -0.98
Cd28P31041 AC162938.2-204ENSMUST00000216455 984 ntTSL 5 BASIC8.93□□□□□ -0.98
Cd28P31041 AC155712.2-201ENSMUST00000220398 643 ntTSL 3 BASIC8.93□□□□□ -0.98
Cd28P31041 CT009757.1-201ENSMUST00000222801 738 ntTSL 5 BASIC8.93□□□□□ -0.98
Cd28P31041 AC122346.3-201ENSMUST00000223983 306 ntBASIC8.93□□□□□ -0.98
Cd28P31041 AC165260.2-203ENSMUST00000224237 336 ntBASIC8.93□□□□□ -0.98
Cd28P31041 Nmi-201ENSMUST00000028314 1291 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Cd28P31041 Eif4ebp3-201ENSMUST00000036765 744 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Cd28P31041 Gm6960-201ENSMUST00000051629 639 ntBASIC8.93□□□□□ -0.98
Cd28P31041 Gm6430-201ENSMUST00000054664 1248 ntBASIC8.93□□□□□ -0.98
Cd28P31041 Lcn6-201ENSMUST00000059693 1254 ntTSL 5 BASIC8.93□□□□□ -0.98
Cd28P31041 Cthrc1-201ENSMUST00000067072 1166 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Cd28P31041 Rdh16f2-201ENSMUST00000092058 1265 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Cd28P31041 Gm12166-201ENSMUST00000093169 958 ntAPPRIS P1 BASIC8.93□□□□□ -0.98
Cd28P31041 Rab7-201ENSMUST00000095048 1275 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Cd28P31041 Hdac7-206ENSMUST00000119670 3899 ntAPPRIS ALT2 TSL 1 (best) BASIC8.93□□□□□ -0.98
Cd28P31041 Oard1-202ENSMUST00000167180 1324 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Cd28P31041 Pex3-207ENSMUST00000170376 1381 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
Cd28P31041 Ceacam9-201ENSMUST00000001984 1396 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Cd28P31041 Tm4sf1-201ENSMUST00000029376 1436 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Cd28P31041 Gm45757-201ENSMUST00000211835 1480 ntBASIC8.93□□□□□ -0.98
Cd28P31041 Gm45719-201ENSMUST00000207954 1662 ntBASIC8.93□□□□□ -0.98
Cd28P31041 Myo15-201ENSMUST00000071880 11769 ntAPPRIS P4 TSL 5 BASIC8.93□□□□□ -0.98
Cd28P31041 Gm36426-201ENSMUST00000222903 1795 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
Cd28P31041 Hsd3b1-202ENSMUST00000107016 1855 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Cd28P31041 Cd1d1-201ENSMUST00000029717 1946 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Cd28P31041 Myh4-202ENSMUST00000170942 5912 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Cd28P31041 Nfyc-204ENSMUST00000120779 2006 ntAPPRIS P1 TSL 5 BASIC8.93□□□□□ -0.98
Cd28P31041 Gm15448-204ENSMUST00000153846 2145 ntAPPRIS P5 TSL 5 BASIC8.93□□□□□ -0.98
Cd28P31041 Neurod6-201ENSMUST00000044767 2150 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Cd28P31041 Gm44070-201ENSMUST00000203389 2220 ntBASIC8.93□□□□□ -0.98
Cd28P31041 Gm29685-201ENSMUST00000219670 2365 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
Cd28P31041 Spag6l-201ENSMUST00000023468 2416 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Cd28P31041 Myh10-201ENSMUST00000018887 7667 ntTSL 5 BASIC8.93□□□□□ -0.98
Cd28P31041 Gm43366-201ENSMUST00000199829 2655 ntBASIC8.93□□□□□ -0.98
Cd28P31041 Slc28a2-202ENSMUST00000110524 2836 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Cd28P31041 Mrps14-203ENSMUST00000135680 2999 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Cd28P31041 Pik3c3-202ENSMUST00000115811 3084 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
Cd28P31041 Limk2-202ENSMUST00000101640 3711 ntTSL 5 BASIC8.93□□□□□ -0.98
Cd28P31041 Pcdhb6-201ENSMUST00000061717 3729 ntAPPRIS P1 BASIC8.93□□□□□ -0.98
Cd28P31041 Mis18bp1-201ENSMUST00000052201 4017 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Cd28P31041 Arhgap6-205ENSMUST00000112131 4053 ntAPPRIS ALT2 TSL 1 (best) BASIC8.93□□□□□ -0.98
Cd28P31041 Trpm1-218ENSMUST00000206277 5076 ntAPPRIS ALT2 TSL 5 BASIC8.92□□□□□ -0.98
Cd28P31041 Gm16059-201ENSMUST00000135583 3778 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
Cd28P31041 Fgd1-202ENSMUST00000112685 3240 ntTSL 5 BASIC8.92□□□□□ -0.98
Cd28P31041 Marveld2-204ENSMUST00000225754 3111 ntAPPRIS P1 BASIC8.92□□□□□ -0.98
Cd28P31041 Ttc16-206ENSMUST00000161430 2874 ntAPPRIS P3 TSL 1 (best) BASIC8.92□□□□□ -0.98
Cd28P31041 Igf2bp1-201ENSMUST00000013559 8378 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Cd28P31041 Lrrc14b-201ENSMUST00000022064 2755 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Cd28P31041 Ablim1-206ENSMUST00000111528 2481 ntTSL 5 BASIC8.92□□□□□ -0.98
Cd28P31041 Gm45889-202ENSMUST00000211255 2358 ntTSL 5 BASIC8.92□□□□□ -0.98
Cd28P31041 Pla2g5-201ENSMUST00000030524 2131 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Cd28P31041 Gm14705-201ENSMUST00000154109 1824 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
Cd28P31041 Asz1-201ENSMUST00000010940 1736 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Cd28P31041 Plekhb2-203ENSMUST00000156687 5176 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
Cd28P31041 Fcamr-201ENSMUST00000027670 1743 ntAPPRIS P3 TSL 1 (best) BASIC8.92□□□□□ -0.98
Cd28P31041 Slamf7-204ENSMUST00000194531 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC8.92□□□□□ -0.98
Cd28P31041 Gcom1-204ENSMUST00000166843 1521 ntAPPRIS ALT2 TSL 5 BASIC8.92□□□□□ -0.98
Cd28P31041 AC130823.1-201ENSMUST00000228929 1549 ntBASIC8.92□□□□□ -0.98
Cd28P31041 4930556L07Rik-201ENSMUST00000134422 1490 ntTSL 5 BASIC8.92□□□□□ -0.98
Cd28P31041 Klhdc10-206ENSMUST00000144272 1387 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
Cd28P31041 Snx29-202ENSMUST00000115814 1125 ntTSL 5 BASIC8.92□□□□□ -0.98
Cd28P31041 Gm8482-201ENSMUST00000117972 471 ntBASIC8.92□□□□□ -0.98
Cd28P31041 Gm13841-201ENSMUST00000118829 483 ntBASIC8.92□□□□□ -0.98
Cd28P31041 Gm11449-201ENSMUST00000119175 476 ntBASIC8.92□□□□□ -0.98
Cd28P31041 Gm16178-201ENSMUST00000129408 677 ntTSL 2 BASIC8.92□□□□□ -0.98
Cd28P31041 Fam229b-208ENSMUST00000139743 679 ntAPPRIS P1 TSL 5 BASIC8.92□□□□□ -0.98
Cd28P31041 Rn7s6-201ENSMUST00000175005 291 ntBASIC8.92□□□□□ -0.98
Cd28P31041 Gm8210-201ENSMUST00000178557 483 ntBASIC8.92□□□□□ -0.98
Cd28P31041 Gm15454-201ENSMUST00000179718 483 ntBASIC8.92□□□□□ -0.98
Cd28P31041 Gm26943-201ENSMUST00000182295 957 ntBASIC8.92□□□□□ -0.98
Cd28P31041 Mir6360-201ENSMUST00000184278 126 ntBASIC8.92□□□□□ -0.98
Cd28P31041 Gm10550-201ENSMUST00000188846 982 ntTSL 2 BASIC8.92□□□□□ -0.98
Cd28P31041 Use1-201ENSMUST00000019169 854 ntAPPRIS P3 TSL 1 (best) BASIC8.92□□□□□ -0.98
Cd28P31041 Gm20186-201ENSMUST00000201775 737 ntTSL 3 BASIC8.92□□□□□ -0.98
Retrieved 100 of 76,532 protein–RNA pairs in 37.1 ms