Protein–RNA interactions for Protein: Q9CYB0

Trim13, E3 ubiquitin-protein ligase TRIM13, mousemouse

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim13Q9CYB0 Eftud2-212ENSMUST00000173679 2889 ntTSL 5 BASIC9.53□□□□□ -0.88
Trim13Q9CYB0 Rep15-201ENSMUST00000036194 1662 ntAPPRIS P1 BASIC9.53□□□□□ -0.88
Trim13Q9CYB0 Daw1-201ENSMUST00000065403 1651 ntAPPRIS P1 TSL 5 BASIC9.53□□□□□ -0.88
Trim13Q9CYB0 Tcl1-202ENSMUST00000101071 1299 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Trim13Q9CYB0 Cstad-201ENSMUST00000102853 819 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Trim13Q9CYB0 2300003K06Rik-201ENSMUST00000105054 1265 ntAPPRIS P1 BASIC9.53□□□□□ -0.88
Trim13Q9CYB0 Ttc4-202ENSMUST00000106772 935 ntAPPRIS ALT2 TSL 5 BASIC9.53□□□□□ -0.88
Trim13Q9CYB0 Pfn1-202ENSMUST00000108549 608 ntTSL 2 BASIC9.53□□□□□ -0.88
Trim13Q9CYB0 Eif5a-206ENSMUST00000108609 849 ntAPPRIS P1 TSL 3 BASIC9.53□□□□□ -0.88
Trim13Q9CYB0 Klrc2-202ENSMUST00000112057 1149 ntAPPRIS P4 TSL 1 (best) BASIC9.53□□□□□ -0.88
Trim13Q9CYB0 Defa-ps4-201ENSMUST00000118021 183 ntBASIC9.53□□□□□ -0.88
Trim13Q9CYB0 Cspp1-204ENSMUST00000119714 1268 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Trim13Q9CYB0 Platr12-201ENSMUST00000141027 462 ntTSL 3 BASIC9.53□□□□□ -0.88
Trim13Q9CYB0 1700027A07Rik-201ENSMUST00000150472 458 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Trim13Q9CYB0 Ddt-202ENSMUST00000172820 574 ntTSL 2 BASIC9.53□□□□□ -0.88
Trim13Q9CYB0 Tcl1-204ENSMUST00000176579 760 ntTSL 2 BASIC9.53□□□□□ -0.88
Trim13Q9CYB0 Gm7583-201ENSMUST00000182941 1005 ntBASIC9.53□□□□□ -0.88
Trim13Q9CYB0 Gm19013-201ENSMUST00000183895 1222 ntBASIC9.53□□□□□ -0.88
Trim13Q9CYB0 Psmb6-201ENSMUST00000018430 798 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Trim13Q9CYB0 Gm19014-201ENSMUST00000184828 1189 ntBASIC9.53□□□□□ -0.88
Trim13Q9CYB0 Gm28975-201ENSMUST00000186412 686 ntBASIC9.53□□□□□ -0.88
Trim13Q9CYB0 Gm17790-201ENSMUST00000191545 1228 ntBASIC9.53□□□□□ -0.88
Trim13Q9CYB0 4833445I07Rik-202ENSMUST00000194104 579 ntTSL 3 BASIC9.53□□□□□ -0.88
Trim13Q9CYB0 Gm37860-201ENSMUST00000195380 1034 ntBASIC9.53□□□□□ -0.88
Trim13Q9CYB0 A830092H15Rik-202ENSMUST00000195446 649 ntTSL 3 BASIC9.53□□□□□ -0.88
Trim13Q9CYB0 Mrnip-201ENSMUST00000020647 1142 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Trim13Q9CYB0 CT010465.1-201ENSMUST00000222463 809 ntTSL 5 BASIC9.53□□□□□ -0.88
Trim13Q9CYB0 AC154435.1-201ENSMUST00000223938 959 ntBASIC9.53□□□□□ -0.88
Trim13Q9CYB0 CT009527.1-201ENSMUST00000224205 339 ntBASIC9.53□□□□□ -0.88
Trim13Q9CYB0 AC154680.1-201ENSMUST00000224376 859 ntBASIC9.53□□□□□ -0.88
Trim13Q9CYB0 AC154849.4-201ENSMUST00000224868 365 ntBASIC9.53□□□□□ -0.88
Trim13Q9CYB0 AC133499.1-201ENSMUST00000227778 1097 ntAPPRIS P1 BASIC9.53□□□□□ -0.88
Trim13Q9CYB0 Fkbpl-201ENSMUST00000036720 1270 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Trim13Q9CYB0 Mlf1-201ENSMUST00000061322 1113 ntAPPRIS P4 TSL 1 (best) BASIC9.53□□□□□ -0.88
Trim13Q9CYB0 Ufc1-201ENSMUST00000080001 1007 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Trim13Q9CYB0 Il1rap-201ENSMUST00000023156 4520 ntAPPRIS P3 TSL 1 (best) BASIC9.53□□□□□ -0.88
Trim13Q9CYB0 1810034E14Rik-201ENSMUST00000181403 1805 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Trim13Q9CYB0 CT033774.1-201ENSMUST00000223084 2394 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Trim13Q9CYB0 Abca17-201ENSMUST00000039324 5202 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Trim13Q9CYB0 Ints2-201ENSMUST00000018212 5906 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Trim13Q9CYB0 Gm9992-201ENSMUST00000070059 1593 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Trim13Q9CYB0 Zfp54-202ENSMUST00000165230 2832 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Trim13Q9CYB0 Zfp352-202ENSMUST00000107129 2276 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Trim13Q9CYB0 Zfp354a-201ENSMUST00000020628 1719 ntAPPRIS P3 TSL 1 (best) BASIC9.53□□□□□ -0.88
Trim13Q9CYB0 Gm17141-201ENSMUST00000167578 3148 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Trim13Q9CYB0 Clip1-201ENSMUST00000031382 4387 ntAPPRIS ALT2 TSL 5 BASIC9.53□□□□□ -0.88
Trim13Q9CYB0 Zeb2os-201ENSMUST00000127150 1305 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Trim13Q9CYB0 Anxa7-207ENSMUST00000224975 2727 ntAPPRIS P2 BASIC9.53□□□□□ -0.88
Trim13Q9CYB0 Tnfrsf8-201ENSMUST00000030339 3414 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Trim13Q9CYB0 Slc12a5-209ENSMUST00000202623 3574 ntAPPRIS ALT2 TSL 1 (best) BASIC9.53□□□□□ -0.88
Trim13Q9CYB0 Txk-203ENSMUST00000197313 2190 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Trim13Q9CYB0 Cers4-201ENSMUST00000008350 9475 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Trim13Q9CYB0 Itga7-201ENSMUST00000099112 4013 ntAPPRIS P2 TSL 2 BASIC9.53□□□□□ -0.88
Trim13Q9CYB0 5430430B14Rik-201ENSMUST00000209427 1630 ntBASIC9.53□□□□□ -0.88
Trim13Q9CYB0 Timeless-205ENSMUST00000105244 4341 ntAPPRIS ALT2 TSL 1 (best) BASIC9.52□□□□□ -0.88
Trim13Q9CYB0 Tmem63c-203ENSMUST00000146292 3455 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.88
Trim13Q9CYB0 Sncaip-201ENSMUST00000025413 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC9.52□□□□□ -0.88
Trim13Q9CYB0 Cldn12-207ENSMUST00000179804 3752 ntAPPRIS P1 TSL 3 BASIC9.52□□□□□ -0.88
Trim13Q9CYB0 Slco4c1-201ENSMUST00000071985 4908 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.88
Trim13Q9CYB0 Cipc-205ENSMUST00000187814 4098 ntAPPRIS ALT2 TSL 1 (best) BASIC9.52□□□□□ -0.88
Trim13Q9CYB0 Cipc-201ENSMUST00000038369 4098 ntAPPRIS P2 TSL 1 (best) BASIC9.52□□□□□ -0.88
Trim13Q9CYB0 Shc4-201ENSMUST00000042246 4059 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.88
Trim13Q9CYB0 AC117656.2-201ENSMUST00000224931 2215 ntBASIC9.52□□□□□ -0.88
Trim13Q9CYB0 Arhgap17-203ENSMUST00000167309 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC9.52□□□□□ -0.88
Trim13Q9CYB0 Zfp958-202ENSMUST00000202692 2364 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.88
Trim13Q9CYB0 Ankrd36-201ENSMUST00000109855 1363 ntAPPRIS ALT2 TSL 1 (best) BASIC9.52□□□□□ -0.88
Trim13Q9CYB0 AC158636.1-201ENSMUST00000220118 1393 ntBASIC9.52□□□□□ -0.88
Trim13Q9CYB0 Ispd-206ENSMUST00000223068 2808 ntTSL 1 (best) BASIC9.52□□□□□ -0.88
Trim13Q9CYB0 Zcchc8-201ENSMUST00000031376 4286 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.88
Trim13Q9CYB0 Tal2-201ENSMUST00000030124 2971 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.88
Trim13Q9CYB0 Gm26903-201ENSMUST00000180749 4583 ntTSL 1 (best) BASIC9.52□□□□□ -0.88
Trim13Q9CYB0 Mfsd4a-201ENSMUST00000046658 3252 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Trim13Q9CYB0 Sept4-203ENSMUST00000107960 1653 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Trim13Q9CYB0 AC113282.5-201ENSMUST00000224330 1679 ntAPPRIS P1 BASIC9.52□□□□□ -0.89
Trim13Q9CYB0 Sipa1l2-201ENSMUST00000108775 6365 ntAPPRIS P2 TSL 1 (best) BASIC9.52□□□□□ -0.89
Trim13Q9CYB0 Csf2rb-201ENSMUST00000096355 4764 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Trim13Q9CYB0 Nuggc-201ENSMUST00000079469 2567 ntAPPRIS P2 TSL 5 BASIC9.52□□□□□ -0.89
Trim13Q9CYB0 Cfb-201ENSMUST00000025229 2737 ntAPPRIS P2 TSL 1 (best) BASIC9.52□□□□□ -0.89
Trim13Q9CYB0 Cntrl-201ENSMUST00000028235 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC9.52□□□□□ -0.89
Trim13Q9CYB0 Cyfip2-201ENSMUST00000093165 6604 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Trim13Q9CYB0 Skap1-206ENSMUST00000107663 742 ntTSL 3 BASIC9.52□□□□□ -0.89
Trim13Q9CYB0 Pmp22-203ENSMUST00000108701 723 ntAPPRIS P1 TSL 3 BASIC9.52□□□□□ -0.89
Trim13Q9CYB0 Lypla1-203ENSMUST00000119612 529 ntTSL 3 BASIC9.52□□□□□ -0.89
Trim13Q9CYB0 Dmrtc1a-204ENSMUST00000121197 1067 ntAPPRIS P2 TSL 1 (best) BASIC9.52□□□□□ -0.89
Trim13Q9CYB0 Ido2-201ENSMUST00000121992 2452 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Trim13Q9CYB0 Inpp4a-205ENSMUST00000132401 3234 ntTSL 5 BASIC9.52□□□□□ -0.89
Trim13Q9CYB0 Gm14565-201ENSMUST00000140021 2494 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Trim13Q9CYB0 Mir1943-201ENSMUST00000158276 73 ntBASIC9.52□□□□□ -0.89
Trim13Q9CYB0 C730034F03Rik-201ENSMUST00000168646 1280 ntAPPRIS P1 BASIC9.52□□□□□ -0.89
Trim13Q9CYB0 9930004E17Rik-201ENSMUST00000180031 498 ntBASIC9.52□□□□□ -0.89
Trim13Q9CYB0 Gm26693-201ENSMUST00000181318 1021 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Trim13Q9CYB0 Gm4895-201ENSMUST00000181646 1137 ntBASIC9.52□□□□□ -0.89
Trim13Q9CYB0 Gm38054-201ENSMUST00000192380 2167 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Trim13Q9CYB0 Olfr431-ps1-201ENSMUST00000192435 544 ntBASIC9.52□□□□□ -0.89
Trim13Q9CYB0 Gm8684-201ENSMUST00000195078 1564 ntBASIC9.52□□□□□ -0.89
Trim13Q9CYB0 Gm38413-202ENSMUST00000198449 2348 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Trim13Q9CYB0 Gm2861-201ENSMUST00000199885 666 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Trim13Q9CYB0 Gm44304-201ENSMUST00000200509 145 ntBASIC9.52□□□□□ -0.89
Trim13Q9CYB0 Gm38804-201ENSMUST00000203998 767 ntTSL 3 BASIC9.52□□□□□ -0.89
Trim13Q9CYB0 Gm45072-201ENSMUST00000208673 929 ntBASIC9.52□□□□□ -0.89
Retrieved 100 of 76,532 protein–RNA pairs in 50.1 ms