Protein–RNA interactions for Protein: Q38HM4

Trim63, E3 ubiquitin-protein ligase TRIM63, mousemouse

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim63Q38HM4 Gm44087-201ENSMUST00000204247 1770 ntBASIC8.38□□□□□ -1.07
Trim63Q38HM4 Vmn1r44-203ENSMUST00000226120 1772 ntBASIC8.38□□□□□ -1.07
Trim63Q38HM4 Kif16b-203ENSMUST00000211861 4523 ntTSL 5 BASIC8.38□□□□□ -1.07
Trim63Q38HM4 Mff-209ENSMUST00000160972 1358 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
Trim63Q38HM4 BC106179-201ENSMUST00000055369 4128 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Trim63Q38HM4 Mrpl11-201ENSMUST00000025836 2882 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Trim63Q38HM4 Cpsf7-201ENSMUST00000038379 3604 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Trim63Q38HM4 Gm13050-201ENSMUST00000122149 1345 ntBASIC8.38□□□□□ -1.07
Trim63Q38HM4 4933427D14Rik-202ENSMUST00000108506 4732 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Trim63Q38HM4 Bcat2-208ENSMUST00000211173 1684 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
Trim63Q38HM4 Gm9864-201ENSMUST00000090043 1656 ntBASIC8.38□□□□□ -1.07
Trim63Q38HM4 Folr1-201ENSMUST00000106981 960 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Trim63Q38HM4 Lcn6-203ENSMUST00000114199 729 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Trim63Q38HM4 Gm11411-201ENSMUST00000117951 719 ntBASIC8.38□□□□□ -1.07
Trim63Q38HM4 Gm12400-201ENSMUST00000120915 1003 ntBASIC8.38□□□□□ -1.07
Trim63Q38HM4 Gm15929-201ENSMUST00000138926 1161 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
Trim63Q38HM4 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC8.38□□□□□ -1.07
Trim63Q38HM4 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC8.38□□□□□ -1.07
Trim63Q38HM4 Gstp1-201ENSMUST00000169613 757 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Trim63Q38HM4 Gm24196-201ENSMUST00000179161 110 ntBASIC8.38□□□□□ -1.07
Trim63Q38HM4 Gm29264-201ENSMUST00000191240 1264 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
Trim63Q38HM4 4930573C15Rik-201ENSMUST00000197707 777 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
Trim63Q38HM4 Gm42931-201ENSMUST00000201009 760 ntTSL 5 BASIC8.38□□□□□ -1.07
Trim63Q38HM4 Gm43997-201ENSMUST00000203986 1005 ntBASIC8.38□□□□□ -1.07
Trim63Q38HM4 Fxyd1-214ENSMUST00000206328 545 ntAPPRIS P1 TSL 3 BASIC8.38□□□□□ -1.07
Trim63Q38HM4 Gm26953-204ENSMUST00000212526 553 ntTSL 5 BASIC8.38□□□□□ -1.07
Trim63Q38HM4 Gm45781-201ENSMUST00000212860 539 ntTSL 5 BASIC8.38□□□□□ -1.07
Trim63Q38HM4 AC156801.1-201ENSMUST00000216158 493 ntTSL 5 BASIC8.38□□□□□ -1.07
Trim63Q38HM4 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Trim63Q38HM4 Scgb2b2-201ENSMUST00000038835 520 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Trim63Q38HM4 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Trim63Q38HM4 Lce3d-201ENSMUST00000059053 491 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Trim63Q38HM4 Taar7d-201ENSMUST00000092657 1077 ntAPPRIS P1 BASIC8.38□□□□□ -1.07
Trim63Q38HM4 Sec14l3-201ENSMUST00000068322 2686 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Trim63Q38HM4 Cul2-201ENSMUST00000025073 3727 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
Trim63Q38HM4 Tango6-201ENSMUST00000048359 4409 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Trim63Q38HM4 Gm4915-201ENSMUST00000121909 1569 ntBASIC8.38□□□□□ -1.07
Trim63Q38HM4 Rps6ka1-205ENSMUST00000157067 2637 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
Trim63Q38HM4 Gm38365-201ENSMUST00000195720 2993 ntBASIC8.38□□□□□ -1.07
Trim63Q38HM4 Rexo5-203ENSMUST00000106520 2492 ntAPPRIS ALT2 TSL 5 BASIC8.38□□□□□ -1.07
Trim63Q38HM4 Nim1k-201ENSMUST00000178142 4103 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Trim63Q38HM4 EPPK1-201ENSMUST00000226781 12325 ntAPPRIS P1 BASIC8.38□□□□□ -1.07
Trim63Q38HM4 Bmpr1b-201ENSMUST00000029948 5349 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Trim63Q38HM4 Rab43-201ENSMUST00000032134 4308 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
Trim63Q38HM4 Lrrc2-201ENSMUST00000035076 3657 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Trim63Q38HM4 Phactr4-203ENSMUST00000102568 4614 ntAPPRIS P2 TSL 1 (best) BASIC8.38□□□□□ -1.07
Trim63Q38HM4 Ccdc86-201ENSMUST00000025639 3003 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Trim63Q38HM4 Med13l-202ENSMUST00000201010 7781 ntAPPRIS ALT2 TSL 5 BASIC8.37□□□□□ -1.07
Trim63Q38HM4 Musk-201ENSMUST00000081919 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC8.37□□□□□ -1.07
Trim63Q38HM4 Pln-202ENSMUST00000163319 1715 ntAPPRIS P1 TSL 5 BASIC8.37□□□□□ -1.07
Trim63Q38HM4 Wdr35-201ENSMUST00000085745 4501 ntAPPRIS P3 TSL 1 (best) BASIC8.37□□□□□ -1.07
Trim63Q38HM4 Cdkl5-201ENSMUST00000087104 3269 ntAPPRIS P2 TSL 1 (best) BASIC8.37□□□□□ -1.07
Trim63Q38HM4 Npy5r-201ENSMUST00000070810 2314 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Trim63Q38HM4 Nln-201ENSMUST00000109315 4162 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Trim63Q38HM4 Tro-207ENSMUST00000163969 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC8.37□□□□□ -1.07
Trim63Q38HM4 Gm12846-201ENSMUST00000120431 1373 ntBASIC8.37□□□□□ -1.07
Trim63Q38HM4 Tulp2-204ENSMUST00000107759 1675 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
Trim63Q38HM4 Rnf38-204ENSMUST00000107836 1694 ntAPPRIS P1 TSL 5 BASIC8.37□□□□□ -1.07
Trim63Q38HM4 Nek3-204ENSMUST00000178324 1989 ntAPPRIS ALT2 TSL 1 (best) BASIC8.37□□□□□ -1.07
Trim63Q38HM4 Gsdmc2-201ENSMUST00000089900 1981 ntAPPRIS P1 TSL 5 BASIC8.37□□□□□ -1.07
Trim63Q38HM4 Gm10118-201ENSMUST00000079279 2569 ntAPPRIS P1 BASIC8.37□□□□□ -1.07
Trim63Q38HM4 Olfr1312-202ENSMUST00000213582 2891 ntAPPRIS P1 TSL 5 BASIC8.37□□□□□ -1.07
Trim63Q38HM4 Cnr2-201ENSMUST00000068830 3756 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Trim63Q38HM4 D330045A20Rik-201ENSMUST00000046763 3737 ntAPPRIS ALT2 TSL 1 (best) BASIC8.37□□□□□ -1.07
Trim63Q38HM4 Dixdc1-202ENSMUST00000117093 1613 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
Trim63Q38HM4 Gm42996-201ENSMUST00000196116 1636 ntBASIC8.37□□□□□ -1.07
Trim63Q38HM4 Gm43052-201ENSMUST00000201451 1628 ntBASIC8.37□□□□□ -1.07
Trim63Q38HM4 Rabl2-202ENSMUST00000094056 1322 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
Trim63Q38HM4 Asic2-202ENSMUST00000066197 2700 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Trim63Q38HM4 Gm8016-201ENSMUST00000221830 1575 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
Trim63Q38HM4 Ighv2-6-8-201ENSMUST00000103455 342 ntAPPRIS ALT2 BASIC8.37□□□□□ -1.07
Trim63Q38HM4 Trgv2-201ENSMUST00000103563 491 ntAPPRIS P1 BASIC8.37□□□□□ -1.07
Trim63Q38HM4 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
Trim63Q38HM4 Nod2-202ENSMUST00000109634 4666 ntAPPRIS ALT2 TSL 1 (best) BASIC8.37□□□□□ -1.07
Trim63Q38HM4 Tmsb10-201ENSMUST00000114048 623 ntAPPRIS P1 TSL 3 BASIC8.37□□□□□ -1.07
Trim63Q38HM4 H2-M6-ps-201ENSMUST00000119193 1034 ntBASIC8.37□□□□□ -1.07
Trim63Q38HM4 Gm13875-201ENSMUST00000120162 282 ntBASIC8.37□□□□□ -1.07
Trim63Q38HM4 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
Trim63Q38HM4 Gm12271-201ENSMUST00000121719 414 ntBASIC8.37□□□□□ -1.07
Trim63Q38HM4 Gm11587-201ENSMUST00000128274 1120 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
Trim63Q38HM4 Prlr-204ENSMUST00000128450 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC8.37□□□□□ -1.07
Trim63Q38HM4 B230206L02Rik-202ENSMUST00000132584 695 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
Trim63Q38HM4 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC8.37□□□□□ -1.07
Trim63Q38HM4 Gm12091-201ENSMUST00000146791 830 ntBASIC8.37□□□□□ -1.07
Trim63Q38HM4 Gm24845-201ENSMUST00000158034 109 ntBASIC8.37□□□□□ -1.07
Trim63Q38HM4 Gm22331-201ENSMUST00000158066 136 ntBASIC8.37□□□□□ -1.07
Trim63Q38HM4 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC8.37□□□□□ -1.07
Trim63Q38HM4 Gm17099-201ENSMUST00000166780 412 ntTSL 3 BASIC8.37□□□□□ -1.07
Trim63Q38HM4 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC8.37□□□□□ -1.07
Trim63Q38HM4 Magohb-205ENSMUST00000173837 897 ntTSL 5 BASIC8.37□□□□□ -1.07
Trim63Q38HM4 Gm26759-201ENSMUST00000181773 1251 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
Trim63Q38HM4 Mir6366-201ENSMUST00000184472 82 ntBASIC8.37□□□□□ -1.07
Trim63Q38HM4 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC8.37□□□□□ -1.07
Trim63Q38HM4 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC8.37□□□□□ -1.07
Trim63Q38HM4 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
Trim63Q38HM4 AL593843.1-201ENSMUST00000195891 145 ntBASIC8.37□□□□□ -1.07
Trim63Q38HM4 Atraid-205ENSMUST00000201136 894 ntAPPRIS ALT2 TSL 3 BASIC8.37□□□□□ -1.07
Trim63Q38HM4 Gm44702-201ENSMUST00000209194 592 ntTSL 3 BASIC8.37□□□□□ -1.07
Trim63Q38HM4 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC8.37□□□□□ -1.07
Trim63Q38HM4 Gm45668-201ENSMUST00000211271 493 ntBASIC8.37□□□□□ -1.07
Retrieved 100 of 76,532 protein–RNA pairs in 52.9 ms