Protein–RNA interactions for Protein: P62311

Lsm3, U6 snRNA-associated Sm-like protein LSm3, mousemouse

Known RBP Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm3P62311 A930005G22Rik-201ENSMUST00000201293 1904 ntBASIC9.21□□□□□ -0.94
Lsm3P62311 Hp1bp3-214ENSMUST00000165861 3361 ntAPPRIS P3 TSL 1 (best) BASIC9.21□□□□□ -0.94
Lsm3P62311 AC131068.2-201ENSMUST00000226175 1453 ntBASIC9.21□□□□□ -0.94
Lsm3P62311 Rbm43-206ENSMUST00000165313 1975 ntAPPRIS P1 TSL 3 BASIC9.21□□□□□ -0.94
Lsm3P62311 Fam78b-202ENSMUST00000126198 2951 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Lsm3P62311 Dad1-202ENSMUST00000128231 3491 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Lsm3P62311 Kdm4a-203ENSMUST00000106403 4536 ntAPPRIS ALT2 TSL 1 (best) BASIC9.21□□□□□ -0.94
Lsm3P62311 Dgki-201ENSMUST00000042075 3028 ntAPPRIS ALT2 TSL 5 BASIC9.21□□□□□ -0.94
Lsm3P62311 Ttc28-206ENSMUST00000156290 10688 ntAPPRIS P2 TSL 5 BASIC9.21□□□□□ -0.94
Lsm3P62311 Abcc12-205ENSMUST00000152438 3083 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Lsm3P62311 Wdr77-201ENSMUST00000010278 3682 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Lsm3P62311 Gm44570-201ENSMUST00000207526 3698 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Lsm3P62311 Cmtr1-201ENSMUST00000024816 6380 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Lsm3P62311 Nasp-202ENSMUST00000030457 2118 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Lsm3P62311 Rbm5-214ENSMUST00000182659 3205 ntAPPRIS P2 TSL 1 (best) BASIC9.2□□□□□ -0.94
Lsm3P62311 Pear1-203ENSMUST00000090981 4314 ntAPPRIS P1 TSL 5 BASIC9.2□□□□□ -0.94
Lsm3P62311 Sox5-205ENSMUST00000111749 3879 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Lsm3P62311 Rpgr-204ENSMUST00000115532 3313 ntAPPRIS ALT2 TSL 1 (best) BASIC9.2□□□□□ -0.94
Lsm3P62311 Baz2a-202ENSMUST00000170054 8372 ntAPPRIS ALT2 TSL 5 BASIC9.2□□□□□ -0.94
Lsm3P62311 Baz2a-201ENSMUST00000045621 8369 ntAPPRIS P2 TSL 5 BASIC9.2□□□□□ -0.94
Lsm3P62311 Nfam1-203ENSMUST00000109503 2834 ntAPPRIS P3 TSL 1 (best) BASIC9.2□□□□□ -0.94
Lsm3P62311 Dach2-205ENSMUST00000113382 5155 ntAPPRIS ALT2 TSL 1 (best) BASIC9.2□□□□□ -0.94
Lsm3P62311 E330034L11Rik-201ENSMUST00000200640 1742 ntBASIC9.2□□□□□ -0.94
Lsm3P62311 Klhl20-201ENSMUST00000111611 4072 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Lsm3P62311 Efcab12-203ENSMUST00000184428 2384 ntAPPRIS P1 TSL 5 BASIC9.2□□□□□ -0.94
Lsm3P62311 Slc25a14-204ENSMUST00000134257 1805 ntAPPRIS ALT1 TSL 5 BASIC9.2□□□□□ -0.94
Lsm3P62311 Gm5697-201ENSMUST00000122295 2482 ntBASIC9.2□□□□□ -0.94
Lsm3P62311 Gm15496-201ENSMUST00000129578 2456 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Lsm3P62311 Ptgr2-201ENSMUST00000123614 3168 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Lsm3P62311 Ighv1-12-201ENSMUST00000103500 294 ntAPPRIS P1 BASIC9.2□□□□□ -0.94
Lsm3P62311 Gm12957-201ENSMUST00000117835 377 ntBASIC9.2□□□□□ -0.94
Lsm3P62311 Gm13914-201ENSMUST00000118202 991 ntBASIC9.2□□□□□ -0.94
Lsm3P62311 Gm11836-201ENSMUST00000121022 441 ntBASIC9.2□□□□□ -0.94
Lsm3P62311 C230038L03Rik-202ENSMUST00000136294 1197 ntTSL 2 BASIC9.2□□□□□ -0.94
Lsm3P62311 Gm14275-201ENSMUST00000152112 430 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Lsm3P62311 Rhoc-204ENSMUST00000176347 583 ntTSL 5 BASIC9.2□□□□□ -0.94
Lsm3P62311 Gm5210-201ENSMUST00000182150 1010 ntBASIC9.2□□□□□ -0.94
Lsm3P62311 Ighv5-8-202ENSMUST00000191967 337 ntBASIC9.2□□□□□ -0.94
Lsm3P62311 Gm37826-201ENSMUST00000195329 322 ntBASIC9.2□□□□□ -0.94
Lsm3P62311 Gm19566-201ENSMUST00000199576 610 ntBASIC9.2□□□□□ -0.94
Lsm3P62311 Gm42710-201ENSMUST00000200608 985 ntBASIC9.2□□□□□ -0.94
Lsm3P62311 AC119177.2-201ENSMUST00000226699 629 ntBASIC9.2□□□□□ -0.94
Lsm3P62311 Myoz2-201ENSMUST00000029761 1181 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Lsm3P62311 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Lsm3P62311 Olfr456-201ENSMUST00000057251 1052 ntAPPRIS P1 BASIC9.2□□□□□ -0.94
Lsm3P62311 Agrp-201ENSMUST00000005849 661 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Lsm3P62311 Tspan8-202ENSMUST00000080630 1156 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Lsm3P62311 Gm6040-201ENSMUST00000095430 857 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Lsm3P62311 Naa10-202ENSMUST00000096316 892 ntAPPRIS ALT2 TSL 2 BASIC9.2□□□□□ -0.94
Lsm3P62311 Atf3-203ENSMUST00000195117 1906 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Lsm3P62311 Ovch2-201ENSMUST00000106755 1953 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Lsm3P62311 Metap2-210ENSMUST00000181217 1984 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Lsm3P62311 Lmo3-206ENSMUST00000163024 1331 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Lsm3P62311 Gm8899-201ENSMUST00000214635 1332 ntBASIC9.2□□□□□ -0.94
Lsm3P62311 D130040H23Rik-204ENSMUST00000212549 2002 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Lsm3P62311 Med24-201ENSMUST00000017354 3410 ntAPPRIS P2 TSL 1 (best) BASIC9.2□□□□□ -0.94
Lsm3P62311 Ikzf2-204ENSMUST00000188110 1365 ntTSL 5 BASIC9.2□□□□□ -0.94
Lsm3P62311 Ikzf2-208ENSMUST00000190855 1359 ntTSL 5 BASIC9.2□□□□□ -0.94
Lsm3P62311 Bag6-211ENSMUST00000173550 3536 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Lsm3P62311 Map2-206ENSMUST00000114017 4981 ntAPPRIS P3 TSL 1 (best) BASIC9.2□□□□□ -0.94
Lsm3P62311 Nup155-201ENSMUST00000163765 6402 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Lsm3P62311 Dusp3-203ENSMUST00000107173 4311 ntTSL 2 BASIC9.2□□□□□ -0.94
Lsm3P62311 Pvr-201ENSMUST00000043517 2905 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Lsm3P62311 Gm28578-203ENSMUST00000189196 1470 ntTSL 5 BASIC9.2□□□□□ -0.94
Lsm3P62311 CT030159.3-201ENSMUST00000222936 1481 ntTSL 5 BASIC9.2□□□□□ -0.94
Lsm3P62311 Gnrhr-202ENSMUST00000094654 1475 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Lsm3P62311 Tgfb1i1-204ENSMUST00000164710 3788 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Lsm3P62311 Dis3l2-201ENSMUST00000065694 3085 ntAPPRIS P3 TSL 1 (best) BASIC9.2□□□□□ -0.94
Lsm3P62311 AC159308.2-201ENSMUST00000213592 2325 ntBASIC9.2□□□□□ -0.94
Lsm3P62311 AC168276.1-201ENSMUST00000218963 2385 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Lsm3P62311 Cd22-201ENSMUST00000019248 3974 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Lsm3P62311 Pa2g4-201ENSMUST00000026425 2432 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Lsm3P62311 Hist1h1d-201ENSMUST00000045301 7425 ntAPPRIS P1 BASIC9.2□□□□□ -0.94
Lsm3P62311 Cyp2d9-201ENSMUST00000089129 1651 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Lsm3P62311 Diaph1-203ENSMUST00000115629 5416 ntAPPRIS ALT2 TSL 5 BASIC9.19□□□□□ -0.94
Lsm3P62311 A1bg-201ENSMUST00000096418 1821 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Lsm3P62311 Ank3-247ENSMUST00000218680 5500 ntAPPRIS ALT2 TSL 5 BASIC9.19□□□□□ -0.94
Lsm3P62311 Cnpy4-202ENSMUST00000110934 1855 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Lsm3P62311 Zfp563-201ENSMUST00000131722 1938 ntAPPRIS P1 TSL 2 BASIC9.19□□□□□ -0.94
Lsm3P62311 Pde4b-201ENSMUST00000030251 1923 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Lsm3P62311 Kctd19-202ENSMUST00000167294 2979 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Lsm3P62311 Epb41l3-215ENSMUST00000225977 3188 ntAPPRIS ALT2 BASIC9.19□□□□□ -0.94
Lsm3P62311 Gm29077-201ENSMUST00000185784 2169 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Lsm3P62311 Gm28696-201ENSMUST00000189187 2169 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Lsm3P62311 Gm28206-201ENSMUST00000190437 2169 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Lsm3P62311 Gm37657-201ENSMUST00000195425 2169 ntTSL 5 BASIC9.19□□□□□ -0.94
Lsm3P62311 Crebbp-205ENSMUST00000205765 7749 ntAPPRIS ALT2 TSL 5 BASIC9.19□□□□□ -0.94
Lsm3P62311 Ddb2-202ENSMUST00000111352 2228 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Lsm3P62311 Myo6-201ENSMUST00000035889 7871 ntTSL 5 BASIC9.19□□□□□ -0.94
Lsm3P62311 Ap2b1-205ENSMUST00000176430 3596 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Lsm3P62311 Cse1l-201ENSMUST00000002790 3641 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Lsm3P62311 Umodl1-201ENSMUST00000066554 5007 ntAPPRIS P2 TSL 1 (best) BASIC9.19□□□□□ -0.94
Lsm3P62311 Trmt10b-202ENSMUST00000107800 983 ntAPPRIS ALT2 TSL 5 BASIC9.19□□□□□ -0.94
Lsm3P62311 Gm6506-201ENSMUST00000119775 1136 ntBASIC9.19□□□□□ -0.94
Lsm3P62311 Gm12271-201ENSMUST00000121719 414 ntBASIC9.19□□□□□ -0.94
Lsm3P62311 Gm12035-201ENSMUST00000121890 623 ntBASIC9.19□□□□□ -0.94
Lsm3P62311 Gm14051-201ENSMUST00000131603 377 ntTSL 3 BASIC9.19□□□□□ -0.94
Lsm3P62311 G630018N14Rik-201ENSMUST00000135656 1231 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Lsm3P62311 Lage3-201ENSMUST00000015433 761 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Lsm3P62311 Gm16312-201ENSMUST00000156285 362 ntTSL 3 BASIC9.19□□□□□ -0.94
Retrieved 100 of 76,532 protein–RNA pairs in 62.4 ms