Protein–RNA interactions for Protein: Q9CYB0

Trim13, E3 ubiquitin-protein ligase TRIM13, mousemouse

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim13Q9CYB0 Gm43811-201ENSMUST00000202862 695 ntBASIC9.55□□□□□ -0.88
Trim13Q9CYB0 Fam24a-202ENSMUST00000207439 711 ntAPPRIS P1 TSL 5 BASIC9.55□□□□□ -0.88
Trim13Q9CYB0 Gm45118-201ENSMUST00000208928 825 ntBASIC9.55□□□□□ -0.88
Trim13Q9CYB0 Gm5130-201ENSMUST00000210233 959 ntBASIC9.55□□□□□ -0.88
Trim13Q9CYB0 AC162938.2-204ENSMUST00000216455 984 ntTSL 5 BASIC9.55□□□□□ -0.88
Trim13Q9CYB0 Colec11-203ENSMUST00000220836 887 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Trim13Q9CYB0 CT009711.2-202ENSMUST00000224538 973 ntBASIC9.55□□□□□ -0.88
Trim13Q9CYB0 AC115122.1-201ENSMUST00000224850 1040 ntBASIC9.55□□□□□ -0.88
Trim13Q9CYB0 Cthrc1-201ENSMUST00000067072 1166 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Trim13Q9CYB0 Vmn1r11-201ENSMUST00000071304 900 ntAPPRIS P2 BASIC9.55□□□□□ -0.88
Trim13Q9CYB0 Acyp1-201ENSMUST00000008966 648 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Trim13Q9CYB0 Bckdk-207ENSMUST00000206745 1702 ntTSL 5 BASIC9.55□□□□□ -0.88
Trim13Q9CYB0 Susd2-202ENSMUST00000095541 3151 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Trim13Q9CYB0 Gm13498-201ENSMUST00000119159 2166 ntBASIC9.55□□□□□ -0.88
Trim13Q9CYB0 Cngb1-204ENSMUST00000121162 3336 ntAPPRIS ALT2 TSL 5 BASIC9.55□□□□□ -0.88
Trim13Q9CYB0 Nek5-201ENSMUST00000169834 2404 ntAPPRIS P3 TSL 1 (best) BASIC9.55□□□□□ -0.88
Trim13Q9CYB0 Kng1-202ENSMUST00000039492 1985 ntAPPRIS P3 TSL 1 (best) BASIC9.55□□□□□ -0.88
Trim13Q9CYB0 Gm19557-201ENSMUST00000182109 2765 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Trim13Q9CYB0 Tacc2-208ENSMUST00000207549 3492 ntAPPRIS ALT2 TSL 1 (best) BASIC9.55□□□□□ -0.88
Trim13Q9CYB0 Tubb1-201ENSMUST00000016399 1406 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Trim13Q9CYB0 Aqp4-201ENSMUST00000079081 5082 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Trim13Q9CYB0 Pklr-202ENSMUST00000107482 2902 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Trim13Q9CYB0 Gm6655-201ENSMUST00000201932 1309 ntBASIC9.55□□□□□ -0.88
Trim13Q9CYB0 Gm26809-201ENSMUST00000180863 2981 ntTSL 5 BASIC9.54□□□□□ -0.88
Trim13Q9CYB0 A230009B12Rik-202ENSMUST00000159602 1810 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Trim13Q9CYB0 Srsf5-202ENSMUST00000110351 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC9.54□□□□□ -0.88
Trim13Q9CYB0 Fam222b-203ENSMUST00000155571 3358 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Trim13Q9CYB0 Btrc-206ENSMUST00000224102 3037 ntBASIC9.54□□□□□ -0.88
Trim13Q9CYB0 Upb1-201ENSMUST00000039925 3042 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Trim13Q9CYB0 Asph-211ENSMUST00000108339 6453 ntAPPRIS ALT2 TSL 1 (best) BASIC9.54□□□□□ -0.88
Trim13Q9CYB0 Trpm1-218ENSMUST00000206277 5076 ntAPPRIS ALT2 TSL 5 BASIC9.54□□□□□ -0.88
Trim13Q9CYB0 C030014I23Rik-204ENSMUST00000217463 1370 ntTSL 5 BASIC9.54□□□□□ -0.88
Trim13Q9CYB0 Gmeb2-201ENSMUST00000049032 4121 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Trim13Q9CYB0 Nr1h4-201ENSMUST00000058126 1964 ntAPPRIS P3 TSL 1 (best) BASIC9.54□□□□□ -0.88
Trim13Q9CYB0 Rabgef1-201ENSMUST00000026390 2828 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Trim13Q9CYB0 Gm43980-201ENSMUST00000204899 1612 ntBASIC9.54□□□□□ -0.88
Trim13Q9CYB0 Slc38a5-203ENSMUST00000115591 1853 ntAPPRIS ALT2 TSL 5 BASIC9.54□□□□□ -0.88
Trim13Q9CYB0 Slc38a5-201ENSMUST00000033512 1868 ntAPPRIS P2 TSL 1 (best) BASIC9.54□□□□□ -0.88
Trim13Q9CYB0 Gm15573-201ENSMUST00000119487 540 ntBASIC9.54□□□□□ -0.88
Trim13Q9CYB0 Gm11491-201ENSMUST00000129441 1118 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Trim13Q9CYB0 Bach2it1-201ENSMUST00000133451 481 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Trim13Q9CYB0 2410003L11Rik-202ENSMUST00000145262 642 ntTSL 3 BASIC9.54□□□□□ -0.88
Trim13Q9CYB0 Gzmn-201ENSMUST00000015587 956 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Trim13Q9CYB0 Gm22902-201ENSMUST00000158488 302 ntBASIC9.54□□□□□ -0.88
Trim13Q9CYB0 Gm9550-201ENSMUST00000161130 862 ntBASIC9.54□□□□□ -0.88
Trim13Q9CYB0 Gm17168-201ENSMUST00000169146 345 ntTSL 5 BASIC9.54□□□□□ -0.88
Trim13Q9CYB0 Platr17-201ENSMUST00000172817 807 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Trim13Q9CYB0 Gm20392-201ENSMUST00000173047 701 ntBASIC9.54□□□□□ -0.88
Trim13Q9CYB0 Ap1g1-206ENSMUST00000179104 1096 ntBASIC9.54□□□□□ -0.88
Trim13Q9CYB0 Gm16755-201ENSMUST00000180595 933 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Trim13Q9CYB0 1700088E04Rik-203ENSMUST00000186053 535 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Trim13Q9CYB0 1700022E09Rik-202ENSMUST00000188342 387 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Trim13Q9CYB0 1700109G14Rik-202ENSMUST00000188538 754 ntTSL 3 BASIC9.54□□□□□ -0.88
Trim13Q9CYB0 Gm10550-201ENSMUST00000188846 982 ntTSL 2 BASIC9.54□□□□□ -0.88
Trim13Q9CYB0 Gm29560-201ENSMUST00000191526 881 ntTSL 5 BASIC9.54□□□□□ -0.88
Trim13Q9CYB0 Gm9369-201ENSMUST00000196009 733 ntBASIC9.54□□□□□ -0.88
Trim13Q9CYB0 Gm44146-201ENSMUST00000203508 816 ntBASIC9.54□□□□□ -0.88
Trim13Q9CYB0 Calca-205ENSMUST00000205933 458 ntTSL 3 BASIC9.54□□□□□ -0.88
Trim13Q9CYB0 Gm4797-201ENSMUST00000219075 1283 ntBASIC9.54□□□□□ -0.88
Trim13Q9CYB0 AC139323.1-201ENSMUST00000223370 1040 ntBASIC9.54□□□□□ -0.88
Trim13Q9CYB0 Gm14267-206ENSMUST00000226870 1209 ntBASIC9.54□□□□□ -0.88
Trim13Q9CYB0 AC154757.2-201ENSMUST00000228885 743 ntBASIC9.54□□□□□ -0.88
Trim13Q9CYB0 4930523C07Rik-202ENSMUST00000097513 300 ntAPPRIS P1 BASIC9.54□□□□□ -0.88
Trim13Q9CYB0 Polq-201ENSMUST00000054034 8552 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Trim13Q9CYB0 Atp6v0e2-201ENSMUST00000040361 1789 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Trim13Q9CYB0 Fam171a1-202ENSMUST00000072955 3364 ntAPPRIS ALT2 TSL 1 (best) BASIC9.54□□□□□ -0.88
Trim13Q9CYB0 Nrxn1-225ENSMUST00000197268 2280 ntTSL 3 BASIC9.54□□□□□ -0.88
Trim13Q9CYB0 Ptgr1-201ENSMUST00000030069 2296 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Trim13Q9CYB0 Hsp90aa1-202ENSMUST00000094361 3281 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Trim13Q9CYB0 Babam2-201ENSMUST00000063813 1410 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Trim13Q9CYB0 Zcchc12-202ENSMUST00000115256 2197 ntAPPRIS P1 TSL 2 BASIC9.54□□□□□ -0.88
Trim13Q9CYB0 Zfx-203ENSMUST00000113926 6762 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Trim13Q9CYB0 Plec-202ENSMUST00000054449 15018 ntAPPRIS ALT2 TSL 5 BASIC9.54□□□□□ -0.88
Trim13Q9CYB0 Zfp264-202ENSMUST00000208781 2801 ntTSL 5 BASIC9.54□□□□□ -0.88
Trim13Q9CYB0 Sfmbt2-202ENSMUST00000114861 1813 ntTSL 5 BASIC9.54□□□□□ -0.88
Trim13Q9CYB0 Gm35363-201ENSMUST00000209330 1317 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Trim13Q9CYB0 Gm9387-201ENSMUST00000098624 1320 ntBASIC9.54□□□□□ -0.88
Trim13Q9CYB0 Cd22-213ENSMUST00000190617 3230 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Trim13Q9CYB0 Decr1-201ENSMUST00000029877 2959 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Trim13Q9CYB0 Pla2g5-203ENSMUST00000102512 1976 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Trim13Q9CYB0 Ccdc47-201ENSMUST00000002043 5193 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Trim13Q9CYB0 Ywhag-201ENSMUST00000055808 3520 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Trim13Q9CYB0 Zfp112-201ENSMUST00000005413 3044 ntAPPRIS P2 TSL 1 (best) BASIC9.53□□□□□ -0.88
Trim13Q9CYB0 Stau2-216ENSMUST00000162627 2773 ntTSL 5 BASIC9.53□□□□□ -0.88
Trim13Q9CYB0 Oprm1-213ENSMUST00000105604 1616 ntAPPRIS ALT1 TSL 5 BASIC9.53□□□□□ -0.88
Trim13Q9CYB0 Zmat2-201ENSMUST00000001419 2257 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Trim13Q9CYB0 Gtf2h3-201ENSMUST00000031333 2672 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Trim13Q9CYB0 Umodl1-201ENSMUST00000066554 5007 ntAPPRIS P2 TSL 1 (best) BASIC9.53□□□□□ -0.88
Trim13Q9CYB0 Ank3-203ENSMUST00000092431 5823 ntAPPRIS ALT2 TSL 5 BASIC9.53□□□□□ -0.88
Trim13Q9CYB0 Gm43081-201ENSMUST00000199082 1380 ntBASIC9.53□□□□□ -0.88
Trim13Q9CYB0 Pus7l-201ENSMUST00000049151 2840 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Trim13Q9CYB0 Cmtr1-201ENSMUST00000024816 6380 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Trim13Q9CYB0 Gm26862-201ENSMUST00000181886 2191 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Trim13Q9CYB0 Gm7932-202ENSMUST00000205047 2194 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Trim13Q9CYB0 Tardbp-202ENSMUST00000084125 7477 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Trim13Q9CYB0 Gm21874-202ENSMUST00000190315 1538 ntAPPRIS P1 TSL 5 BASIC9.53□□□□□ -0.88
Trim13Q9CYB0 Lig3-211ENSMUST00000173722 5797 ntAPPRIS P3 TSL 5 BASIC9.53□□□□□ -0.88
Trim13Q9CYB0 Ces1f-201ENSMUST00000034178 1926 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Trim13Q9CYB0 Proser3-201ENSMUST00000062708 1905 ntAPPRIS P2 TSL 5 BASIC9.53□□□□□ -0.88
Trim13Q9CYB0 Ank3-247ENSMUST00000218680 5500 ntAPPRIS ALT2 TSL 5 BASIC9.53□□□□□ -0.88
Retrieved 100 of 76,532 protein–RNA pairs in 49 ms