Protein–RNA interactions for Protein: Q99PJ1

Pcdh15, Protocadherin-15, mousemouse

Predictions only

Length 1,943 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh15Q99PJ1 Gm42931-201ENSMUST00000201009 760 ntTSL 5 BASIC11.39□□□□□ -0.59
Pcdh15Q99PJ1 Fcer2a-207ENSMUST00000208492 1053 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Pcdh15Q99PJ1 Mkl2-202ENSMUST00000056715 618 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Pcdh15Q99PJ1 Mup2-201ENSMUST00000074700 927 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Pcdh15Q99PJ1 Mup7-201ENSMUST00000079697 927 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Pcdh15Q99PJ1 Mup19-201ENSMUST00000080606 927 ntAPPRIS P2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Pcdh15Q99PJ1 Tigit-201ENSMUST00000096065 963 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Pcdh15Q99PJ1 Enthd1-201ENSMUST00000096347 2110 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Pcdh15Q99PJ1 Gsta1-201ENSMUST00000098537 875 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Pcdh15Q99PJ1 Gm37368-201ENSMUST00000193173 3212 ntBASIC11.39□□□□□ -0.59
Pcdh15Q99PJ1 Fam110b-201ENSMUST00000054857 3210 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Pcdh15Q99PJ1 Gm7742-201ENSMUST00000167648 1527 ntBASIC11.39□□□□□ -0.59
Pcdh15Q99PJ1 Gm7732-201ENSMUST00000170486 1527 ntBASIC11.39□□□□□ -0.59
Pcdh15Q99PJ1 Gm7740-201ENSMUST00000186171 1527 ntBASIC11.39□□□□□ -0.59
Pcdh15Q99PJ1 Gm7736-201ENSMUST00000096981 1527 ntBASIC11.39□□□□□ -0.59
Pcdh15Q99PJ1 Hk3-202ENSMUST00000123097 2896 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Pcdh15Q99PJ1 Rin3-201ENSMUST00000056950 3892 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
Pcdh15Q99PJ1 Tns1-209ENSMUST00000187691 2813 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Pcdh15Q99PJ1 Gm6124-201ENSMUST00000188240 2580 ntBASIC11.38□□□□□ -0.59
Pcdh15Q99PJ1 Hmbox1-209ENSMUST00000176832 1586 ntTSL 5 BASIC11.38□□□□□ -0.59
Pcdh15Q99PJ1 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Pcdh15Q99PJ1 Tmem144-202ENSMUST00000168038 2220 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Pcdh15Q99PJ1 Ptprh-202ENSMUST00000166650 3642 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Pcdh15Q99PJ1 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Pcdh15Q99PJ1 Kif2c-202ENSMUST00000106436 2378 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
Pcdh15Q99PJ1 Plekhb1-205ENSMUST00000107046 2793 ntAPPRIS ALT1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Pcdh15Q99PJ1 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Pcdh15Q99PJ1 Ica1-204ENSMUST00000115520 1876 ntAPPRIS P2 TSL 5 BASIC11.38□□□□□ -0.59
Pcdh15Q99PJ1 Rnf13-201ENSMUST00000041826 2678 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Pcdh15Q99PJ1 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Pcdh15Q99PJ1 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC11.38□□□□□ -0.59
Pcdh15Q99PJ1 Gfra1-201ENSMUST00000026076 4641 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Pcdh15Q99PJ1 Gm23659-201ENSMUST00000102245 110 ntBASIC11.38□□□□□ -0.59
Pcdh15Q99PJ1 Trappc1-202ENSMUST00000102601 759 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Pcdh15Q99PJ1 Gm8818-201ENSMUST00000110797 1047 ntBASIC11.38□□□□□ -0.59
Pcdh15Q99PJ1 Bdh2-202ENSMUST00000120397 1172 ntTSL 5 BASIC11.38□□□□□ -0.59
Pcdh15Q99PJ1 Gm15416-201ENSMUST00000131080 442 ntTSL 3 BASIC11.38□□□□□ -0.59
Pcdh15Q99PJ1 Gm9844-201ENSMUST00000170837 485 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
Pcdh15Q99PJ1 Igkv4-62-201ENSMUST00000177795 288 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
Pcdh15Q99PJ1 Gm21976-202ENSMUST00000180066 831 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Pcdh15Q99PJ1 Gm27941-201ENSMUST00000183418 142 ntBASIC11.38□□□□□ -0.59
Pcdh15Q99PJ1 Olfr696-ps1-201ENSMUST00000207160 948 ntBASIC11.38□□□□□ -0.59
Pcdh15Q99PJ1 Gm45454-201ENSMUST00000211484 455 ntBASIC11.38□□□□□ -0.59
Pcdh15Q99PJ1 Gm8689-201ENSMUST00000218709 712 ntBASIC11.38□□□□□ -0.59
Pcdh15Q99PJ1 AC152946.3-201ENSMUST00000219424 280 ntBASIC11.38□□□□□ -0.59
Pcdh15Q99PJ1 Gm14267-205ENSMUST00000226697 1299 ntBASIC11.38□□□□□ -0.59
Pcdh15Q99PJ1 1700010B08Rik-201ENSMUST00000073081 899 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Pcdh15Q99PJ1 Olfr132-201ENSMUST00000087128 942 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
Pcdh15Q99PJ1 H2al1j-201ENSMUST00000091180 330 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
Pcdh15Q99PJ1 Nps-201ENSMUST00000097983 840 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Pcdh15Q99PJ1 Gm38055-201ENSMUST00000195353 2217 ntBASIC11.38□□□□□ -0.59
Pcdh15Q99PJ1 Gm19557-201ENSMUST00000182109 2765 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Pcdh15Q99PJ1 Ccdc189-201ENSMUST00000072155 2536 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Pcdh15Q99PJ1 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Pcdh15Q99PJ1 Htr3b-201ENSMUST00000008734 2411 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Pcdh15Q99PJ1 Cyth3-202ENSMUST00000116456 3738 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Pcdh15Q99PJ1 Gm5859-201ENSMUST00000165401 2324 ntBASIC11.38□□□□□ -0.59
Pcdh15Q99PJ1 Tmem184b-202ENSMUST00000178522 3314 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Pcdh15Q99PJ1 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Pcdh15Q99PJ1 Sfmbt2-203ENSMUST00000114862 1763 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Pcdh15Q99PJ1 Atp1a3-201ENSMUST00000080882 3621 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Pcdh15Q99PJ1 Mtmr11-201ENSMUST00000054356 2778 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Pcdh15Q99PJ1 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Pcdh15Q99PJ1 Cacnb2-203ENSMUST00000114723 3945 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Pcdh15Q99PJ1 Gper1-201ENSMUST00000066211 2537 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Pcdh15Q99PJ1 Plcg1-203ENSMUST00000109462 5107 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
Pcdh15Q99PJ1 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Pcdh15Q99PJ1 Gm17031-201ENSMUST00000016698 1669 ntBASIC11.37□□□□□ -0.59
Pcdh15Q99PJ1 Clpb-201ENSMUST00000001884 4627 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Pcdh15Q99PJ1 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC11.37□□□□□ -0.59
Pcdh15Q99PJ1 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Pcdh15Q99PJ1 Gtf2ird1-203ENSMUST00000100650 3487 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Pcdh15Q99PJ1 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Pcdh15Q99PJ1 Ighv1-72-201ENSMUST00000103541 396 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
Pcdh15Q99PJ1 Gm24432-201ENSMUST00000104075 126 ntBASIC11.37□□□□□ -0.59
Pcdh15Q99PJ1 Gm12353-201ENSMUST00000108250 554 ntAPPRIS P1 TSL 2 BASIC11.37□□□□□ -0.59
Pcdh15Q99PJ1 Gm14439-201ENSMUST00000122320 441 ntBASIC11.37□□□□□ -0.59
Pcdh15Q99PJ1 Gm15104-201ENSMUST00000132626 842 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Pcdh15Q99PJ1 Gm11832-201ENSMUST00000148576 432 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Pcdh15Q99PJ1 Gm11431-201ENSMUST00000155046 428 ntTSL 3 BASIC11.37□□□□□ -0.59
Pcdh15Q99PJ1 Gm24298-201ENSMUST00000158299 60 ntBASIC11.37□□□□□ -0.59
Pcdh15Q99PJ1 Gm28115-201ENSMUST00000188985 360 ntBASIC11.37□□□□□ -0.59
Pcdh15Q99PJ1 Cdk2ap1-205ENSMUST00000196910 483 ntAPPRIS ALT1 TSL 2 BASIC11.37□□□□□ -0.59
Pcdh15Q99PJ1 Gm44576-201ENSMUST00000208876 411 ntBASIC11.37□□□□□ -0.59
Pcdh15Q99PJ1 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC11.37□□□□□ -0.59
Pcdh15Q99PJ1 1700049L16Rik-201ENSMUST00000049520 543 ntBASIC11.37□□□□□ -0.59
Pcdh15Q99PJ1 Folr2-201ENSMUST00000094141 1067 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Pcdh15Q99PJ1 Gm10803-201ENSMUST00000099692 2483 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Pcdh15Q99PJ1 Sec31b-201ENSMUST00000063632 3939 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
Pcdh15Q99PJ1 Gm12014-201ENSMUST00000120164 1620 ntBASIC11.37□□□□□ -0.59
Pcdh15Q99PJ1 AU019990-202ENSMUST00000143964 1614 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Pcdh15Q99PJ1 1700034J05Rik-201ENSMUST00000036592 3007 ntAPPRIS P4 TSL 1 (best) BASIC11.37□□□□□ -0.59
Pcdh15Q99PJ1 Bcl2l2-203ENSMUST00000133397 3813 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Pcdh15Q99PJ1 Pigq-219ENSMUST00000208071 2926 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
Pcdh15Q99PJ1 Plagl1-203ENSMUST00000121766 3897 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Pcdh15Q99PJ1 4930432K21Rik-201ENSMUST00000093375 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Pcdh15Q99PJ1 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Pcdh15Q99PJ1 Tfrc-201ENSMUST00000023486 4890 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Pcdh15Q99PJ1 P2rx2-206ENSMUST00000200214 1568 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Pcdh15Q99PJ1 4732491K20Rik-201ENSMUST00000181774 3142 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 45.5 ms