Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Ptges3l-203ENSMUST00000107252 853 ntAPPRIS ALT2 TSL 1 (best) BASIC9.71□□□□□ -0.86
Clrn1Q8K445 Rbfox1-202ENSMUST00000115841 1191 ntTSL 5 BASIC9.71□□□□□ -0.86
Clrn1Q8K445 Gm11235-201ENSMUST00000117763 333 ntBASIC9.71□□□□□ -0.86
Clrn1Q8K445 Gm12816-201ENSMUST00000118069 1212 ntBASIC9.71□□□□□ -0.86
Clrn1Q8K445 Nnmt-202ENSMUST00000119426 912 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
Clrn1Q8K445 Gm13688-201ENSMUST00000121557 608 ntBASIC9.71□□□□□ -0.86
Clrn1Q8K445 Gm12052-201ENSMUST00000142151 933 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
Clrn1Q8K445 Gm42791-202ENSMUST00000147473 727 ntAPPRIS P1 TSL 5 BASIC9.71□□□□□ -0.86
Clrn1Q8K445 Aif1l-207ENSMUST00000148056 670 ntTSL 5 BASIC9.71□□□□□ -0.86
Clrn1Q8K445 Parvaos-201ENSMUST00000154848 1285 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
Clrn1Q8K445 Tcl1-203ENSMUST00000175652 535 ntTSL 2 BASIC9.71□□□□□ -0.86
Clrn1Q8K445 Erg-209ENSMUST00000177450 1280 ntTSL 5 BASIC9.71□□□□□ -0.86
Clrn1Q8K445 Omt2b-203ENSMUST00000187667 727 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Clrn1Q8K445 Gm18182-201ENSMUST00000191380 1251 ntBASIC9.71□□□□□ -0.86
Clrn1Q8K445 4930412E21Rik-201ENSMUST00000194267 778 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
Clrn1Q8K445 Gm4032-203ENSMUST00000211600 531 ntTSL 3 BASIC9.71□□□□□ -0.86
Clrn1Q8K445 Gpx4-ps2-201ENSMUST00000214811 555 ntBASIC9.71□□□□□ -0.86
Clrn1Q8K445 AC141884.2-201ENSMUST00000228811 775 ntBASIC9.71□□□□□ -0.86
Clrn1Q8K445 Nmb-201ENSMUST00000026817 705 ntAPPRIS P3 TSL 1 (best) BASIC9.71□□□□□ -0.86
Clrn1Q8K445 Sept4-202ENSMUST00000063156 1245 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
Clrn1Q8K445 Ptges3l-201ENSMUST00000093933 748 ntAPPRIS ALT2 TSL 1 (best) BASIC9.71□□□□□ -0.86
Clrn1Q8K445 Cacna1d-204ENSMUST00000223803 6435 ntAPPRIS ALT2 BASIC9.71□□□□□ -0.86
Clrn1Q8K445 Sardh-202ENSMUST00000102886 4521 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Clrn1Q8K445 Nwd1-201ENSMUST00000093427 7840 ntTSL 5 BASIC9.71□□□□□ -0.86
Clrn1Q8K445 Prr27-202ENSMUST00000101056 1337 ntAPPRIS ALT2 TSL 1 (best) BASIC9.71□□□□□ -0.86
Clrn1Q8K445 Gm20831-201ENSMUST00000177639 1337 ntAPPRIS P1 TSL 5 BASIC9.71□□□□□ -0.86
Clrn1Q8K445 Gm20737-202ENSMUST00000187245 1338 ntAPPRIS P1 TSL 5 BASIC9.71□□□□□ -0.86
Clrn1Q8K445 Gm20777-202ENSMUST00000187434 1341 ntAPPRIS P1 TSL 5 BASIC9.71□□□□□ -0.86
Clrn1Q8K445 Gm20873-202ENSMUST00000187857 1342 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Clrn1Q8K445 Gm20772-201ENSMUST00000188928 1343 ntAPPRIS P1 TSL 5 BASIC9.71□□□□□ -0.86
Clrn1Q8K445 Gm21310-202ENSMUST00000189630 1343 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Clrn1Q8K445 Gm20795-202ENSMUST00000190909 1344 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Clrn1Q8K445 Gm21440-201ENSMUST00000192749 1344 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Clrn1Q8K445 Gm20831-202ENSMUST00000194411 1344 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Clrn1Q8K445 Gm21425-202ENSMUST00000195626 1345 ntAPPRIS P1 TSL 5 BASIC9.71□□□□□ -0.86
Clrn1Q8K445 Prr27-201ENSMUST00000002310 1313 ntAPPRIS P3 TSL 1 (best) BASIC9.71□□□□□ -0.86
Clrn1Q8K445 Prss23os-202ENSMUST00000179361 1362 ntBASIC9.71□□□□□ -0.86
Clrn1Q8K445 Gm3712-201ENSMUST00000118523 2071 ntBASIC9.71□□□□□ -0.86
Clrn1Q8K445 Blnk-201ENSMUST00000054769 2097 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Clrn1Q8K445 4930417O13Rik-203ENSMUST00000204911 3458 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
Clrn1Q8K445 Serpinc1-201ENSMUST00000064725 4970 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Clrn1Q8K445 Gm12159-201ENSMUST00000143869 1447 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
Clrn1Q8K445 Adamtsl3-203ENSMUST00000173287 7249 ntAPPRIS P1 TSL 5 BASIC9.71□□□□□ -0.86
Clrn1Q8K445 Ptpn2-202ENSMUST00000120934 1497 ntAPPRIS ALT2 TSL 5 BASIC9.71□□□□□ -0.86
Clrn1Q8K445 Plekha6-201ENSMUST00000038295 7388 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
Clrn1Q8K445 Apba2-206ENSMUST00000206246 3027 ntAPPRIS ALT2 TSL 5 BASIC9.71□□□□□ -0.86
Clrn1Q8K445 Gm6727-201ENSMUST00000204102 1518 ntBASIC9.71□□□□□ -0.86
Clrn1Q8K445 Ralgps1-204ENSMUST00000113165 6192 ntAPPRIS P1 TSL 5 BASIC9.71□□□□□ -0.86
Clrn1Q8K445 Sec16a-201ENSMUST00000091252 8737 ntAPPRIS P2 TSL 5 BASIC9.71□□□□□ -0.86
Clrn1Q8K445 Hk3-201ENSMUST00000052949 3219 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Clrn1Q8K445 Pde2a-204ENSMUST00000209537 4100 ntAPPRIS ALT2 TSL 1 (best) BASIC9.71□□□□□ -0.86
Clrn1Q8K445 Epn2-204ENSMUST00000108713 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC9.71□□□□□ -0.86
Clrn1Q8K445 Slco5a1-204ENSMUST00000136197 5123 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Clrn1Q8K445 Xpo7-201ENSMUST00000022696 4472 ntAPPRIS P2 TSL 1 (best) BASIC9.7□□□□□ -0.86
Clrn1Q8K445 Ctsa-202ENSMUST00000103092 3646 ntAPPRIS ALT2 TSL 5 BASIC9.7□□□□□ -0.86
Clrn1Q8K445 Cntrl-201ENSMUST00000028235 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC9.7□□□□□ -0.86
Clrn1Q8K445 Ppp1r3c-201ENSMUST00000087321 2719 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Clrn1Q8K445 Zfp317-205ENSMUST00000215372 2809 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Clrn1Q8K445 Phf20-201ENSMUST00000037401 5737 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Clrn1Q8K445 Mdm1-203ENSMUST00000164077 2922 ntAPPRIS ALT2 TSL 1 (best) BASIC9.7□□□□□ -0.86
Clrn1Q8K445 Kng1-202ENSMUST00000039492 1985 ntAPPRIS P3 TSL 1 (best) BASIC9.7□□□□□ -0.86
Clrn1Q8K445 Caprin1-202ENSMUST00000111147 4069 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Clrn1Q8K445 Ccdc87-201ENSMUST00000088653 3163 ntAPPRIS P1 BASIC9.7□□□□□ -0.86
Clrn1Q8K445 LMLN2-201ENSMUST00000224691 2342 ntAPPRIS P5 BASIC9.7□□□□□ -0.86
Clrn1Q8K445 Tln2-207ENSMUST00000215784 8330 ntAPPRIS ALT1 TSL 5 BASIC9.7□□□□□ -0.86
Clrn1Q8K445 Gm37613-201ENSMUST00000195677 3580 ntBASIC9.7□□□□□ -0.86
Clrn1Q8K445 Psmb3-201ENSMUST00000103147 766 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Clrn1Q8K445 Gm25880-201ENSMUST00000104331 132 ntBASIC9.7□□□□□ -0.86
Clrn1Q8K445 Lime1-202ENSMUST00000108804 960 ntTSL 3 BASIC9.7□□□□□ -0.86
Clrn1Q8K445 Gm13183-201ENSMUST00000118615 789 ntBASIC9.7□□□□□ -0.86
Clrn1Q8K445 Prelid3b-203ENSMUST00000120822 622 ntTSL 3 BASIC9.7□□□□□ -0.86
Clrn1Q8K445 Gm14255-201ENSMUST00000128846 248 ntTSL 5 BASIC9.7□□□□□ -0.86
Clrn1Q8K445 Gm5860-201ENSMUST00000137810 1028 ntTSL 2 BASIC9.7□□□□□ -0.86
Clrn1Q8K445 Smim20-201ENSMUST00000147148 922 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Clrn1Q8K445 Hcrtr1-204ENSMUST00000164887 1251 ntAPPRIS P1 TSL 5 BASIC9.7□□□□□ -0.86
Clrn1Q8K445 Gm8451-201ENSMUST00000170338 447 ntBASIC9.7□□□□□ -0.86
Clrn1Q8K445 B230110C06Rik-201ENSMUST00000181388 1274 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Clrn1Q8K445 Mir6387-201ENSMUST00000184042 108 ntBASIC9.7□□□□□ -0.86
Clrn1Q8K445 Mrgprb7-ps-201ENSMUST00000190238 964 ntBASIC9.7□□□□□ -0.86
Clrn1Q8K445 Gm43830-201ENSMUST00000198760 1067 ntBASIC9.7□□□□□ -0.86
Clrn1Q8K445 Gm9515-201ENSMUST00000200276 647 ntBASIC9.7□□□□□ -0.86
Clrn1Q8K445 Mpv17-206ENSMUST00000201353 846 ntAPPRIS P3 TSL 3 BASIC9.7□□□□□ -0.86
Clrn1Q8K445 Fkbp6-204ENSMUST00000201791 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC9.7□□□□□ -0.86
Clrn1Q8K445 Gm42732-201ENSMUST00000202887 1197 ntBASIC9.7□□□□□ -0.86
Clrn1Q8K445 2010109P13Rik-201ENSMUST00000204605 392 ntBASIC9.7□□□□□ -0.86
Clrn1Q8K445 Gm7192-201ENSMUST00000210793 1137 ntBASIC9.7□□□□□ -0.86
Clrn1Q8K445 Gm45893-201ENSMUST00000211899 247 ntBASIC9.7□□□□□ -0.86
Clrn1Q8K445 AC168279.1-201ENSMUST00000214611 382 ntBASIC9.7□□□□□ -0.86
Clrn1Q8K445 AC153379.1-201ENSMUST00000218174 485 ntTSL 3 BASIC9.7□□□□□ -0.86
Clrn1Q8K445 AC170597.1-201ENSMUST00000221956 440 ntTSL 2 BASIC9.7□□□□□ -0.86
Clrn1Q8K445 Gm6353-201ENSMUST00000223234 1051 ntBASIC9.7□□□□□ -0.86
Clrn1Q8K445 Cenpx-201ENSMUST00000026137 692 ntTSL 2 BASIC9.7□□□□□ -0.86
Clrn1Q8K445 Gm5453-201ENSMUST00000080866 447 ntBASIC9.7□□□□□ -0.86
Clrn1Q8K445 Gm25201-201ENSMUST00000083093 170 ntBASIC9.7□□□□□ -0.86
Clrn1Q8K445 Gm25517-201ENSMUST00000083865 134 ntBASIC9.7□□□□□ -0.86
Clrn1Q8K445 Mir483-201ENSMUST00000093631 73 ntBASIC9.7□□□□□ -0.86
Clrn1Q8K445 Nudcd3-201ENSMUST00000066496 3927 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Clrn1Q8K445 C230014O12Rik-201ENSMUST00000134921 2668 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Clrn1Q8K445 Xab2-201ENSMUST00000019614 2677 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Clrn1Q8K445 Gm44445-201ENSMUST00000204075 2683 ntBASIC9.7□□□□□ -0.86
Retrieved 100 of 76,532 protein–RNA pairs in 55.3 ms