Protein–RNA interactions for Protein: P61969

Lmo4, LIM domain transcription factor LMO4, mousemouse

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lmo4P61969 4930547H16Rik-201ENSMUST00000222281 907 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Lmo4P61969 Rpl21-ps2-201ENSMUST00000222933 481 ntBASIC8.31□□□□□ -1.08
Lmo4P61969 AC154643.1-201ENSMUST00000225643 625 ntBASIC8.31□□□□□ -1.08
Lmo4P61969 Htr1b-201ENSMUST00000051005 1273 ntAPPRIS P1 BASIC8.31□□□□□ -1.08
Lmo4P61969 Gm25483-201ENSMUST00000083224 227 ntBASIC8.31□□□□□ -1.08
Lmo4P61969 Gm23458-201ENSMUST00000083257 169 ntBASIC8.31□□□□□ -1.08
Lmo4P61969 Zfp354a-204ENSMUST00000109122 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC8.31□□□□□ -1.08
Lmo4P61969 Wdr4-207ENSMUST00000171171 4153 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Lmo4P61969 Btnl1-201ENSMUST00000080254 1861 ntAPPRIS P1 TSL 5 BASIC8.31□□□□□ -1.08
Lmo4P61969 Tnfsf13b-203ENSMUST00000207792 4771 ntAPPRIS P3 TSL 1 (best) BASIC8.31□□□□□ -1.08
Lmo4P61969 Myo16-203ENSMUST00000207477 7169 ntAPPRIS P2 TSL 1 (best) BASIC8.31□□□□□ -1.08
Lmo4P61969 Sel1l-201ENSMUST00000021347 6300 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Lmo4P61969 Ccl22-201ENSMUST00000034231 2216 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Lmo4P61969 Papss1-206ENSMUST00000200527 2811 ntTSL 5 BASIC8.31□□□□□ -1.08
Lmo4P61969 Gm10646-201ENSMUST00000213227 3293 ntTSL 2 BASIC8.31□□□□□ -1.08
Lmo4P61969 Rcbtb2-219ENSMUST00000169513 3622 ntAPPRIS ALT2 TSL 1 (best) BASIC8.31□□□□□ -1.08
Lmo4P61969 Rtn4ip1-202ENSMUST00000105492 2059 ntTSL 3 BASIC8.31□□□□□ -1.08
Lmo4P61969 Myo7a-204ENSMUST00000107128 7506 ntAPPRIS ALT2 TSL 5 BASIC8.31□□□□□ -1.08
Lmo4P61969 Sgsm1-202ENSMUST00000057209 4339 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Lmo4P61969 Asap1-202ENSMUST00000110114 4409 ntAPPRIS ALT2 TSL 5 BASIC8.31□□□□□ -1.08
Lmo4P61969 Pcdhb20-201ENSMUST00000052179 3559 ntAPPRIS P1 BASIC8.31□□□□□ -1.08
Lmo4P61969 Itga11-201ENSMUST00000034774 4969 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Lmo4P61969 Gm10603-201ENSMUST00000183512 2279 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Lmo4P61969 Gm10643-201ENSMUST00000098592 1577 ntAPPRIS P1 BASIC8.31□□□□□ -1.08
Lmo4P61969 Ppp6r3-201ENSMUST00000025846 4841 ntAPPRIS P3 TSL 1 (best) BASIC8.31□□□□□ -1.08
Lmo4P61969 Asb6-201ENSMUST00000041726 4147 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Lmo4P61969 Brat1-202ENSMUST00000100505 3431 ntAPPRIS ALT2 TSL 1 (best) BASIC8.31□□□□□ -1.08
Lmo4P61969 Dcun1d3-202ENSMUST00000098080 3072 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Lmo4P61969 Nf2-202ENSMUST00000056290 2394 ntAPPRIS ALT1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Lmo4P61969 Pdha2-201ENSMUST00000057860 2352 ntAPPRIS P1 BASIC8.3□□□□□ -1.08
Lmo4P61969 Gm45871-204ENSMUST00000211710 2003 ntAPPRIS P1 TSL 3 BASIC8.3□□□□□ -1.08
Lmo4P61969 Oxct1-201ENSMUST00000110690 3527 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Lmo4P61969 Gm9864-201ENSMUST00000090043 1656 ntBASIC8.3□□□□□ -1.08
Lmo4P61969 Tmem178b-201ENSMUST00000061740 3178 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Lmo4P61969 Gm29895-201ENSMUST00000209933 5652 ntTSL 5 BASIC8.3□□□□□ -1.08
Lmo4P61969 Bod1l-204ENSMUST00000202908 10399 ntAPPRIS ALT2 TSL 5 BASIC8.3□□□□□ -1.08
Lmo4P61969 4933406M09Rik-201ENSMUST00000162187 1768 ntAPPRIS P1 TSL 2 BASIC8.3□□□□□ -1.08
Lmo4P61969 Col9a1-201ENSMUST00000054588 3834 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Lmo4P61969 Pabpc5-202ENSMUST00000113366 2243 ntAPPRIS P1 TSL 5 BASIC8.3□□□□□ -1.08
Lmo4P61969 Zfp384-205ENSMUST00000112424 2673 ntAPPRIS ALT2 TSL 5 BASIC8.3□□□□□ -1.08
Lmo4P61969 Grb2-204ENSMUST00000106499 2333 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
Lmo4P61969 Gm15535-202ENSMUST00000148478 1519 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
Lmo4P61969 Gm44933-201ENSMUST00000208637 1987 ntTSL 5 BASIC8.3□□□□□ -1.08
Lmo4P61969 Ces3b-202ENSMUST00000093221 2403 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Lmo4P61969 Rnf44-217ENSMUST00000150806 3772 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
Lmo4P61969 Zdhhc9-201ENSMUST00000037960 2982 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Lmo4P61969 Ybey-201ENSMUST00000049185 4522 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Lmo4P61969 Pla2g2d-201ENSMUST00000030528 2167 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Lmo4P61969 Gmppb-202ENSMUST00000112295 2702 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Lmo4P61969 Zcchc4-201ENSMUST00000031077 5743 ntAPPRIS P3 TSL 1 (best) BASIC8.3□□□□□ -1.08
Lmo4P61969 Bahcc1-202ENSMUST00000118987 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC8.3□□□□□ -1.08
Lmo4P61969 Ighv6-3-201ENSMUST00000103486 356 ntAPPRIS P1 BASIC8.3□□□□□ -1.08
Lmo4P61969 Ighv6-6-201ENSMUST00000103489 357 ntAPPRIS P1 BASIC8.3□□□□□ -1.08
Lmo4P61969 Tnnt3-213ENSMUST00000105952 1040 ntAPPRIS ALT2 TSL 1 (best) BASIC8.3□□□□□ -1.08
Lmo4P61969 Tnnt3-214ENSMUST00000105953 1049 ntAPPRIS ALT2 TSL 1 (best) BASIC8.3□□□□□ -1.08
Lmo4P61969 Tnnt3-215ENSMUST00000105954 1052 ntAPPRIS ALT2 TSL 1 (best) BASIC8.3□□□□□ -1.08
Lmo4P61969 Tnnt3-216ENSMUST00000105955 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC8.3□□□□□ -1.08
Lmo4P61969 Tnnt3-218ENSMUST00000105958 1050 ntAPPRIS ALT2 TSL 1 (best) BASIC8.3□□□□□ -1.08
Lmo4P61969 Tomm5-203ENSMUST00000107809 738 ntTSL 3 BASIC8.3□□□□□ -1.08
Lmo4P61969 Wfdc2-203ENSMUST00000109345 558 ntAPPRIS ALT2 TSL 3 BASIC8.3□□□□□ -1.08
Lmo4P61969 Gm15626-201ENSMUST00000117478 868 ntBASIC8.3□□□□□ -1.08
Lmo4P61969 Gm13286-201ENSMUST00000117750 537 ntBASIC8.3□□□□□ -1.08
Lmo4P61969 Gm12168-201ENSMUST00000119051 368 ntBASIC8.3□□□□□ -1.08
Lmo4P61969 Oosp2-201ENSMUST00000121793 677 ntAPPRIS P2 TSL 1 (best) BASIC8.3□□□□□ -1.08
Lmo4P61969 Gm13629-201ENSMUST00000141149 1022 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
Lmo4P61969 A630023P12Rik-203ENSMUST00000141532 638 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
Lmo4P61969 1700026D11Rik-205ENSMUST00000151417 789 ntTSL 3 BASIC8.3□□□□□ -1.08
Lmo4P61969 Rsl24d1-203ENSMUST00000165177 597 ntTSL 3 BASIC8.3□□□□□ -1.08
Lmo4P61969 Gm9117-201ENSMUST00000177735 1098 ntAPPRIS P1 BASIC8.3□□□□□ -1.08
Lmo4P61969 Tnnt3-225ENSMUST00000179658 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC8.3□□□□□ -1.08
Lmo4P61969 Gm16973-201ENSMUST00000180682 1299 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
Lmo4P61969 Gm26810-201ENSMUST00000181153 1106 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
Lmo4P61969 Gm28499-201ENSMUST00000191576 666 ntTSL 2 BASIC8.3□□□□□ -1.08
Lmo4P61969 Gm33969-201ENSMUST00000197615 388 ntTSL 3 BASIC8.3□□□□□ -1.08
Lmo4P61969 AC157931.1-201ENSMUST00000198565 346 ntAPPRIS P1 TSL 3 BASIC8.3□□□□□ -1.08
Lmo4P61969 Gm43997-201ENSMUST00000203986 1005 ntBASIC8.3□□□□□ -1.08
Lmo4P61969 Kcne3-206ENSMUST00000207995 439 ntAPPRIS P1 TSL 2 BASIC8.3□□□□□ -1.08
Lmo4P61969 2210039B01Rik-201ENSMUST00000222490 1044 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
Lmo4P61969 Hesx1-202ENSMUST00000224331 983 ntAPPRIS P1 BASIC8.3□□□□□ -1.08
Lmo4P61969 Tnnt3-202ENSMUST00000078497 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC8.3□□□□□ -1.08
Lmo4P61969 Olfr1115-201ENSMUST00000081986 1102 ntAPPRIS P1 BASIC8.3□□□□□ -1.08
Lmo4P61969 Serpina1f-202ENSMUST00000117053 2830 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
Lmo4P61969 Grhl2-201ENSMUST00000022895 4947 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Lmo4P61969 Nhsl1-201ENSMUST00000037341 7321 ntAPPRIS P3 TSL 5 BASIC8.3□□□□□ -1.08
Lmo4P61969 Armcx4-201ENSMUST00000124226 7996 ntAPPRIS P1 TSL 2 BASIC8.3□□□□□ -1.08
Lmo4P61969 Gm37583-201ENSMUST00000195460 2487 ntBASIC8.3□□□□□ -1.08
Lmo4P61969 Zer1-201ENSMUST00000044751 4100 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
Lmo4P61969 Edil3-202ENSMUST00000081769 5317 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Lmo4P61969 Dnmt3a-218ENSMUST00000174817 8737 ntAPPRIS ALT2 TSL 1 (best) BASIC8.3□□□□□ -1.08
Lmo4P61969 Adam8-202ENSMUST00000106069 3117 ntAPPRIS P3 TSL 1 (best) BASIC8.3□□□□□ -1.08
Lmo4P61969 Adam8-201ENSMUST00000026546 3100 ntAPPRIS ALT2 TSL 1 (best) BASIC8.3□□□□□ -1.08
Lmo4P61969 AC147366.2-201ENSMUST00000226859 2038 ntBASIC8.3□□□□□ -1.08
Lmo4P61969 Plcd4-206ENSMUST00000113750 2692 ntAPPRIS ALT2 TSL 1 (best) BASIC8.3□□□□□ -1.08
Lmo4P61969 AU019823-201ENSMUST00000131351 3316 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Lmo4P61969 4932430I15Rik-201ENSMUST00000180431 3306 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
Lmo4P61969 Ttll5-205ENSMUST00000110224 4647 ntAPPRIS ALT2 TSL 5 BASIC8.3□□□□□ -1.08
Lmo4P61969 Lin54-209ENSMUST00000152387 2760 ntTSL 5 BASIC8.3□□□□□ -1.08
Lmo4P61969 9530077C05Rik-201ENSMUST00000058868 2223 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Lmo4P61969 Rbm6-207ENSMUST00000183032 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC8.3□□□□□ -1.08
Lmo4P61969 Slc25a42-202ENSMUST00000110127 3196 ntAPPRIS P1 TSL 5 BASIC8.3□□□□□ -1.08
Retrieved 100 of 76,532 protein–RNA pairs in 67 ms