Protein–RNA interactions for Protein: Q9CYB0

Trim13, E3 ubiquitin-protein ligase TRIM13, mousemouse

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim13Q9CYB0 Brd4-202ENSMUST00000114475 2731 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Trim13Q9CYB0 Gm17745-201ENSMUST00000212186 1692 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Trim13Q9CYB0 Fgfr1-213ENSMUST00000167764 2915 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Trim13Q9CYB0 Tmco4-201ENSMUST00000043042 2922 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Trim13Q9CYB0 AC153940.1-201ENSMUST00000220149 5300 ntBASIC9.57□□□□□ -0.88
Trim13Q9CYB0 1700010I14Rik-203ENSMUST00000151609 1853 ntAPPRIS P3 TSL 1 (best) BASIC9.57□□□□□ -0.88
Trim13Q9CYB0 Toe1-201ENSMUST00000030451 2090 ntAPPRIS P2 TSL 1 (best) BASIC9.57□□□□□ -0.88
Trim13Q9CYB0 Sun1-205ENSMUST00000110883 3714 ntAPPRIS ALT2 TSL 1 (best) BASIC9.57□□□□□ -0.88
Trim13Q9CYB0 Sap30bpos-201ENSMUST00000132264 2352 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Trim13Q9CYB0 Tnfaip8-212ENSMUST00000179937 2385 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Trim13Q9CYB0 Helz2-201ENSMUST00000094203 9162 ntAPPRIS ALT2 TSL 5 BASIC9.57□□□□□ -0.88
Trim13Q9CYB0 Zmiz2-204ENSMUST00000109786 4319 ntAPPRIS P2 TSL 5 BASIC9.57□□□□□ -0.88
Trim13Q9CYB0 Vps39-201ENSMUST00000028752 4339 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Trim13Q9CYB0 Sv2b-201ENSMUST00000085164 5307 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Trim13Q9CYB0 2310043P16Rik-201ENSMUST00000205403 3881 ntBASIC9.56□□□□□ -0.88
Trim13Q9CYB0 Aoc3-202ENSMUST00000103105 4397 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Trim13Q9CYB0 Hsd3b5-201ENSMUST00000044094 1549 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Trim13Q9CYB0 Pcdhga2-201ENSMUST00000193869 4689 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Trim13Q9CYB0 Xlr3a-201ENSMUST00000074619 1645 ntAPPRIS P2 TSL 1 (best) BASIC9.56□□□□□ -0.88
Trim13Q9CYB0 Eci2-201ENSMUST00000021854 1746 ntAPPRIS P3 TSL 1 (best) BASIC9.56□□□□□ -0.88
Trim13Q9CYB0 Cyp2e1-201ENSMUST00000026552 1833 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Trim13Q9CYB0 Slc36a2-201ENSMUST00000039305 2429 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Trim13Q9CYB0 Gm26658-201ENSMUST00000181067 2500 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Trim13Q9CYB0 Papss1-206ENSMUST00000200527 2811 ntTSL 5 BASIC9.56□□□□□ -0.88
Trim13Q9CYB0 Abcc9-206ENSMUST00000205202 4752 ntAPPRIS ALT2 TSL 5 BASIC9.56□□□□□ -0.88
Trim13Q9CYB0 Mpp2-201ENSMUST00000017458 4089 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Trim13Q9CYB0 Osbpl5-201ENSMUST00000020411 3994 ntAPPRIS P3 TSL 1 (best) BASIC9.56□□□□□ -0.88
Trim13Q9CYB0 Fblim1-203ENSMUST00000105785 3091 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Trim13Q9CYB0 Slc35f6-201ENSMUST00000062962 3088 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Trim13Q9CYB0 Pcdh15-229ENSMUST00000155701 2754 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Trim13Q9CYB0 Mc4r-201ENSMUST00000057942 2758 ntAPPRIS P1 BASIC9.56□□□□□ -0.88
Trim13Q9CYB0 Gm10031-201ENSMUST00000190422 2653 ntAPPRIS P1 BASIC9.56□□□□□ -0.88
Trim13Q9CYB0 Cdh23-205ENSMUST00000105464 11090 ntAPPRIS P2 TSL 5 BASIC9.56□□□□□ -0.88
Trim13Q9CYB0 Gad1-ps-201ENSMUST00000167243 1776 ntBASIC9.56□□□□□ -0.88
Trim13Q9CYB0 Urod-201ENSMUST00000030446 1489 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Trim13Q9CYB0 Gm10479-201ENSMUST00000101568 318 ntAPPRIS P1 TSL 5 BASIC9.56□□□□□ -0.88
Trim13Q9CYB0 Cdc42se1-204ENSMUST00000107201 907 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Trim13Q9CYB0 Cat-202ENSMUST00000111168 779 ntTSL 3 BASIC9.56□□□□□ -0.88
Trim13Q9CYB0 Mkrn2os-202ENSMUST00000112957 964 ntAPPRIS P1 TSL 2 BASIC9.56□□□□□ -0.88
Trim13Q9CYB0 Gm14233-201ENSMUST00000149576 439 ntTSL 3 BASIC9.56□□□□□ -0.88
Trim13Q9CYB0 Gm12951-201ENSMUST00000150216 434 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Trim13Q9CYB0 Gm12718-202ENSMUST00000156144 660 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Trim13Q9CYB0 Prss36-208ENSMUST00000156152 1132 ntTSL 5 BASIC9.56□□□□□ -0.88
Trim13Q9CYB0 Gm37800-202ENSMUST00000193667 553 ntTSL 3 BASIC9.56□□□□□ -0.88
Trim13Q9CYB0 Gm37533-201ENSMUST00000193848 545 ntBASIC9.56□□□□□ -0.88
Trim13Q9CYB0 Gm37017-201ENSMUST00000195266 747 ntBASIC9.56□□□□□ -0.88
Trim13Q9CYB0 Myo1h-206ENSMUST00000196467 1208 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Trim13Q9CYB0 Gm43097-201ENSMUST00000196867 151 ntBASIC9.56□□□□□ -0.88
Trim13Q9CYB0 Gm44840-201ENSMUST00000208983 1168 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Trim13Q9CYB0 AC153891.1-201ENSMUST00000213761 742 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Trim13Q9CYB0 Myl6-203ENSMUST00000217776 562 ntTSL 3 BASIC9.56□□□□□ -0.88
Trim13Q9CYB0 Nme6-201ENSMUST00000035053 1074 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Trim13Q9CYB0 Ndufc1-201ENSMUST00000038108 1249 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Trim13Q9CYB0 Olfr456-201ENSMUST00000057251 1052 ntAPPRIS P1 BASIC9.56□□□□□ -0.88
Trim13Q9CYB0 Gm26226-201ENSMUST00000082509 116 ntBASIC9.56□□□□□ -0.88
Trim13Q9CYB0 Plscr4-201ENSMUST00000034941 3204 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Trim13Q9CYB0 Mblac2-201ENSMUST00000057598 3957 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Trim13Q9CYB0 Gad1-201ENSMUST00000094934 3355 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Trim13Q9CYB0 Gm44056-201ENSMUST00000204623 1427 ntBASIC9.56□□□□□ -0.88
Trim13Q9CYB0 Pax5-205ENSMUST00000107827 1315 ntTSL 5 BASIC9.56□□□□□ -0.88
Trim13Q9CYB0 Shcbp1-201ENSMUST00000022945 2156 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Trim13Q9CYB0 Atg9a-201ENSMUST00000040689 3764 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Trim13Q9CYB0 Alppl2-201ENSMUST00000027455 2092 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Trim13Q9CYB0 2810029C07Rik-201ENSMUST00000180698 1954 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Trim13Q9CYB0 D3Ertd751e-201ENSMUST00000026867 1989 ntAPPRIS ALT2 TSL 5 BASIC9.55□□□□□ -0.88
Trim13Q9CYB0 Tmem30c-203ENSMUST00000120112 3478 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Trim13Q9CYB0 Ctso-201ENSMUST00000029649 3468 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Trim13Q9CYB0 Zfp948-201ENSMUST00000088787 2612 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Trim13Q9CYB0 Gm12530-201ENSMUST00000152074 1759 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Trim13Q9CYB0 Acta2-201ENSMUST00000039631 1781 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Trim13Q9CYB0 Xdh-201ENSMUST00000024866 4587 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Trim13Q9CYB0 Spry4-201ENSMUST00000025295 4587 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Trim13Q9CYB0 Supt7l-205ENSMUST00000202421 3056 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Trim13Q9CYB0 Mtfr1-204ENSMUST00000130645 2953 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Trim13Q9CYB0 Slc44a4-202ENSMUST00000169230 2246 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Trim13Q9CYB0 Gsdmc3-203ENSMUST00000190682 2140 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Trim13Q9CYB0 Gm42833-201ENSMUST00000196019 2124 ntBASIC9.55□□□□□ -0.88
Trim13Q9CYB0 Trio-210ENSMUST00000227337 6375 ntBASIC9.55□□□□□ -0.88
Trim13Q9CYB0 Homer1-204ENSMUST00000102752 5713 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Trim13Q9CYB0 Cipc-208ENSMUST00000189246 1454 ntAPPRIS P2 TSL 2 BASIC9.55□□□□□ -0.88
Trim13Q9CYB0 Gm42608-201ENSMUST00000197563 2018 ntBASIC9.55□□□□□ -0.88
Trim13Q9CYB0 Bbs9-209ENSMUST00000147405 3045 ntAPPRIS ALT1 TSL 5 BASIC9.55□□□□□ -0.88
Trim13Q9CYB0 Mir124a-1hg-201ENSMUST00000180610 4103 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Trim13Q9CYB0 Ifna16-201ENSMUST00000105148 1010 ntAPPRIS P1 BASIC9.55□□□□□ -0.88
Trim13Q9CYB0 Vmn1r3-201ENSMUST00000105159 1011 ntAPPRIS P1 BASIC9.55□□□□□ -0.88
Trim13Q9CYB0 Prdx1-202ENSMUST00000106470 877 ntAPPRIS P1 TSL 5 BASIC9.55□□□□□ -0.88
Trim13Q9CYB0 Tpm1-210ENSMUST00000113693 1054 ntTSL 5 BASIC9.55□□□□□ -0.88
Trim13Q9CYB0 Rpl28-ps3-201ENSMUST00000116058 393 ntBASIC9.55□□□□□ -0.88
Trim13Q9CYB0 Gm13019-201ENSMUST00000120000 276 ntBASIC9.55□□□□□ -0.88
Trim13Q9CYB0 1700003G13Rik-202ENSMUST00000131342 705 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Trim13Q9CYB0 Gm6425-201ENSMUST00000136332 790 ntBASIC9.55□□□□□ -0.88
Trim13Q9CYB0 Gm11670-201ENSMUST00000143435 511 ntTSL 2 BASIC9.55□□□□□ -0.88
Trim13Q9CYB0 Gm27191-201ENSMUST00000145973 448 ntTSL 3 BASIC9.55□□□□□ -0.88
Trim13Q9CYB0 Gm15881-201ENSMUST00000148792 942 ntBASIC9.55□□□□□ -0.88
Trim13Q9CYB0 Gm17231-202ENSMUST00000165858 663 ntTSL 5 BASIC9.55□□□□□ -0.88
Trim13Q9CYB0 Tcstv1-202ENSMUST00000190512 875 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Trim13Q9CYB0 Gm37390-201ENSMUST00000192452 872 ntBASIC9.55□□□□□ -0.88
Trim13Q9CYB0 Gm37458-201ENSMUST00000194055 410 ntBASIC9.55□□□□□ -0.88
Trim13Q9CYB0 Gm37709-201ENSMUST00000195074 600 ntBASIC9.55□□□□□ -0.88
Trim13Q9CYB0 Gm42710-201ENSMUST00000200608 985 ntBASIC9.55□□□□□ -0.88
Retrieved 100 of 76,532 protein–RNA pairs in 50.4 ms