Protein–RNA interactions for Protein: P97459

Npas1, Neuronal PAS domain-containing protein 1, mousemouse

Predictions only

Length 594 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npas1P97459 Gm25343-201ENSMUST00000157460 107 ntBASIC8.61□□□□□ -1.03
Npas1P97459 Rps19-ps10-201ENSMUST00000159750 435 ntBASIC8.61□□□□□ -1.03
Npas1P97459 Gm20441-201ENSMUST00000173512 756 ntAPPRIS P1 TSL 5 BASIC8.61□□□□□ -1.03
Npas1P97459 9530034A14Rik-201ENSMUST00000197919 1083 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
Npas1P97459 Gm43671-201ENSMUST00000200422 433 ntBASIC8.61□□□□□ -1.03
Npas1P97459 Gm9555-201ENSMUST00000200908 583 ntBASIC8.61□□□□□ -1.03
Npas1P97459 4930413E15Rik-201ENSMUST00000202500 1290 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
Npas1P97459 9530062K07Rik-201ENSMUST00000203332 787 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
Npas1P97459 Pdzd9-203ENSMUST00000208635 1238 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
Npas1P97459 Gm9619-201ENSMUST00000211587 762 ntBASIC8.61□□□□□ -1.03
Npas1P97459 Gm36176-201ENSMUST00000218749 501 ntAPPRIS P1 BASIC8.61□□□□□ -1.03
Npas1P97459 2310039L15Rik-203ENSMUST00000220058 727 ntTSL 5 BASIC8.61□□□□□ -1.03
Npas1P97459 AC154290.1-201ENSMUST00000223786 1240 ntBASIC8.61□□□□□ -1.03
Npas1P97459 Fam151b-201ENSMUST00000040106 1152 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Npas1P97459 Ccdc87-201ENSMUST00000088653 3163 ntAPPRIS P1 BASIC8.61□□□□□ -1.03
Npas1P97459 Gm29101-201ENSMUST00000188329 1471 ntBASIC8.61□□□□□ -1.03
Npas1P97459 Rreb1-207ENSMUST00000128570 8436 ntAPPRIS P1 TSL 5 BASIC8.61□□□□□ -1.03
Npas1P97459 Il6st-209ENSMUST00000184445 1870 ntTSL 5 BASIC8.61□□□□□ -1.03
Npas1P97459 Nbr1-203ENSMUST00000103099 4789 ntAPPRIS P3 TSL 1 (best) BASIC8.61□□□□□ -1.03
Npas1P97459 B930082K07Rik-201ENSMUST00000181046 2478 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
Npas1P97459 Gm45837-201ENSMUST00000084894 4139 ntAPPRIS P1 TSL 5 BASIC8.61□□□□□ -1.03
Npas1P97459 Vmn1r40-204ENSMUST00000228485 2689 ntBASIC8.61□□□□□ -1.03
Npas1P97459 Ube2k-207ENSMUST00000202082 4506 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
Npas1P97459 Ncbp3-201ENSMUST00000021135 12106 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Npas1P97459 A930003O13Rik-202ENSMUST00000197486 3098 ntBASIC8.61□□□□□ -1.03
Npas1P97459 Anxa9-204ENSMUST00000164406 1611 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Npas1P97459 Calr4-201ENSMUST00000030285 1606 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Npas1P97459 Gm16429-202ENSMUST00000201400 1848 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Npas1P97459 Gm7971-201ENSMUST00000086950 1848 ntAPPRIS P1 TSL 5 BASIC8.61□□□□□ -1.03
Npas1P97459 Gm37084-201ENSMUST00000191688 5898 ntBASIC8.61□□□□□ -1.03
Npas1P97459 Rad18-204ENSMUST00000113182 2220 ntAPPRIS ALT2 TSL 5 BASIC8.61□□□□□ -1.03
Npas1P97459 Ddhd2-201ENSMUST00000033975 4245 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Npas1P97459 2410002F23Rik-202ENSMUST00000071296 4201 ntAPPRIS P2 TSL 2 BASIC8.61□□□□□ -1.03
Npas1P97459 Adamts4-202ENSMUST00000111315 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC8.61□□□□□ -1.03
Npas1P97459 Gm4962-201ENSMUST00000199640 2977 ntBASIC8.61□□□□□ -1.03
Npas1P97459 Olfr52-202ENSMUST00000215138 2751 ntAPPRIS P1 TSL 5 BASIC8.61□□□□□ -1.03
Npas1P97459 N4bp2-201ENSMUST00000087264 5308 ntAPPRIS P1 TSL 5 BASIC8.61□□□□□ -1.03
Npas1P97459 Gm18981-201ENSMUST00000185373 1599 ntBASIC8.61□□□□□ -1.03
Npas1P97459 Got1l1-201ENSMUST00000038174 1356 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Npas1P97459 Adar-203ENSMUST00000107405 5871 ntAPPRIS ALT2 TSL 1 (best) BASIC8.6□□□□□ -1.03
Npas1P97459 Tcaf1-201ENSMUST00000045054 5257 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Npas1P97459 Oasl2-201ENSMUST00000031542 3123 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Npas1P97459 4931431C16Rik-201ENSMUST00000124643 2735 ntTSL 2 BASIC8.6□□□□□ -1.03
Npas1P97459 Ect2l-203ENSMUST00000207827 2730 ntAPPRIS ALT2 TSL 5 BASIC8.6□□□□□ -1.03
Npas1P97459 Gramd1b-203ENSMUST00000119373 3857 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
Npas1P97459 C920021L13Rik-201ENSMUST00000120398 1723 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
Npas1P97459 Nckap5-208ENSMUST00000161954 7090 ntAPPRIS ALT2 TSL 1 (best) BASIC8.6□□□□□ -1.03
Npas1P97459 Dntt-202ENSMUST00000112200 2068 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Npas1P97459 Ctnnd1-206ENSMUST00000111675 5089 ntTSL 5 BASIC8.6□□□□□ -1.03
Npas1P97459 Slc17a8-202ENSMUST00000105295 1863 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
Npas1P97459 D430013B06Rik-201ENSMUST00000192922 1872 ntBASIC8.6□□□□□ -1.03
Npas1P97459 Txndc9-208ENSMUST00000195247 1699 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Npas1P97459 Fgd3-201ENSMUST00000048716 3519 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Npas1P97459 Mmp19-203ENSMUST00000219404 2236 ntAPPRIS ALT2 TSL 1 (best) BASIC8.6□□□□□ -1.03
Npas1P97459 Clcc1-202ENSMUST00000106609 2043 ntAPPRIS P3 TSL 1 (best) BASIC8.6□□□□□ -1.03
Npas1P97459 Akap8-201ENSMUST00000002699 3695 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Npas1P97459 Smarca1-201ENSMUST00000077569 4024 ntAPPRIS P3 TSL 1 (best) BASIC8.6□□□□□ -1.03
Npas1P97459 Stx12-201ENSMUST00000030698 2934 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Npas1P97459 Clip1-201ENSMUST00000031382 4387 ntAPPRIS ALT2 TSL 5 BASIC8.6□□□□□ -1.03
Npas1P97459 Gm12389-201ENSMUST00000117696 418 ntBASIC8.6□□□□□ -1.03
Npas1P97459 Gm12663-201ENSMUST00000118481 958 ntBASIC8.6□□□□□ -1.03
Npas1P97459 Gm12217-201ENSMUST00000118858 696 ntBASIC8.6□□□□□ -1.03
Npas1P97459 Gm15573-201ENSMUST00000119487 540 ntBASIC8.6□□□□□ -1.03
Npas1P97459 Gm11824-201ENSMUST00000120191 846 ntBASIC8.6□□□□□ -1.03
Npas1P97459 Smim6-201ENSMUST00000132961 978 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Npas1P97459 Vmn2r-ps54-203ENSMUST00000150856 1142 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
Npas1P97459 Gm14275-201ENSMUST00000152112 430 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
Npas1P97459 Gm20662-201ENSMUST00000176356 601 ntAPPRIS P5 TSL 3 BASIC8.6□□□□□ -1.03
Npas1P97459 Gm10731-201ENSMUST00000181171 448 ntBASIC8.6□□□□□ -1.03
Npas1P97459 Scgb2b27-203ENSMUST00000185399 702 ntAPPRIS ALT2 TSL 2 BASIC8.6□□□□□ -1.03
Npas1P97459 1700029J03Rik-201ENSMUST00000185803 789 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
Npas1P97459 Creb1-209ENSMUST00000190348 1260 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
Npas1P97459 Gm37020-201ENSMUST00000195303 992 ntBASIC8.6□□□□□ -1.03
Npas1P97459 Gm7047-201ENSMUST00000196224 1063 ntBASIC8.6□□□□□ -1.03
Npas1P97459 Gm42423-201ENSMUST00000196396 670 ntTSL 3 BASIC8.6□□□□□ -1.03
Npas1P97459 Qdpr-209ENSMUST00000198258 1172 ntTSL 5 BASIC8.6□□□□□ -1.03
Npas1P97459 Gm44753-202ENSMUST00000208297 562 ntTSL 5 BASIC8.6□□□□□ -1.03
Npas1P97459 AC159376.1-201ENSMUST00000218504 630 ntBASIC8.6□□□□□ -1.03
Npas1P97459 CT025618.1-203ENSMUST00000227008 589 ntBASIC8.6□□□□□ -1.03
Npas1P97459 Myoz2-201ENSMUST00000029761 1181 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Npas1P97459 Olfr414-201ENSMUST00000053178 955 ntAPPRIS P1 BASIC8.6□□□□□ -1.03
Npas1P97459 Gm25580-201ENSMUST00000083409 327 ntBASIC8.6□□□□□ -1.03
Npas1P97459 Zfp42-201ENSMUST00000082120 1772 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Npas1P97459 Ttll7-201ENSMUST00000037942 7394 ntAPPRIS P2 TSL 5 BASIC8.6□□□□□ -1.03
Npas1P97459 Cenpo-202ENSMUST00000111169 1550 ntAPPRIS ALT2 TSL 1 (best) BASIC8.6□□□□□ -1.03
Npas1P97459 Ssb-206ENSMUST00000166411 2088 ntAPPRIS P1 TSL 5 BASIC8.6□□□□□ -1.03
Npas1P97459 AC125351.1-201ENSMUST00000221438 2223 ntBASIC8.6□□□□□ -1.03
Npas1P97459 Echdc3-201ENSMUST00000042658 1851 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Npas1P97459 Nuggc-202ENSMUST00000150897 2745 ntAPPRIS ALT2 TSL 5 BASIC8.6□□□□□ -1.03
Npas1P97459 Mapk6-201ENSMUST00000049355 4072 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Npas1P97459 Gm38116-201ENSMUST00000193873 1533 ntBASIC8.59□□□□□ -1.03
Npas1P97459 Bet1-201ENSMUST00000049166 1516 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Npas1P97459 Samd15-202ENSMUST00000182869 2031 ntAPPRIS P1 TSL 5 BASIC8.59□□□□□ -1.03
Npas1P97459 Kirrel3-205ENSMUST00000187182 3532 ntAPPRIS ALT2 TSL 1 (best) BASIC8.59□□□□□ -1.03
Npas1P97459 Cdh23-205ENSMUST00000105464 11090 ntAPPRIS P2 TSL 5 BASIC8.59□□□□□ -1.03
Npas1P97459 Gm17745-201ENSMUST00000212186 1692 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
Npas1P97459 AC116589.5-201ENSMUST00000222230 1660 ntTSL 5 BASIC8.59□□□□□ -1.03
Npas1P97459 Odf2-210ENSMUST00000113765 3188 ntAPPRIS ALT2 TSL 5 BASIC8.59□□□□□ -1.03
Npas1P97459 Prrc1-201ENSMUST00000025490 4801 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Npas1P97459 Lrrc57-201ENSMUST00000102496 1848 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Retrieved 100 of 76,532 protein–RNA pairs in 60 ms