Protein–RNA interactions for Protein: P53564

Cux1, Homeobox protein cut-like 1, mousemouse

Predictions only

Length 1,515 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cux1P53564 AC124173.1-201ENSMUST00000223701 189 ntBASIC15.65■□□□□ 0.1
Cux1P53564 Figla-201ENSMUST00000032070 759 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cux1P53564 A430093F15Rik-201ENSMUST00000087947 985 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Cux1P53564 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cux1P53564 Fam47e-202ENSMUST00000131166 1500 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Cux1P53564 Rdh16f1-201ENSMUST00000128247 2766 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cux1P53564 AC151903.1-201ENSMUST00000226677 1423 ntBASIC15.65■□□□□ 0.1
Cux1P53564 9530082P21Rik-203ENSMUST00000181605 3162 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Cux1P53564 Nudt8-201ENSMUST00000155405 3904 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
Cux1P53564 Kmt5b-207ENSMUST00000113974 4150 ntAPPRIS P3 TSL 5 BASIC15.65■□□□□ 0.1
Cux1P53564 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC15.65■□□□□ 0.1
Cux1P53564 Gm37975-201ENSMUST00000195494 2099 ntBASIC15.65■□□□□ 0.1
Cux1P53564 Gm10643-201ENSMUST00000098592 1577 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
Cux1P53564 Tbc1d14-202ENSMUST00000124036 2765 ntTSL 5 BASIC15.65■□□□□ 0.1
Cux1P53564 Ikbkb-201ENSMUST00000033939 3580 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cux1P53564 Baiap3-202ENSMUST00000182056 4645 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cux1P53564 Gm6351-203ENSMUST00000139828 1542 ntAPPRIS P5 TSL 5 BASIC15.64■□□□□ 0.09
Cux1P53564 AC124426.1-201ENSMUST00000220871 2707 ntTSL 2 BASIC15.64■□□□□ 0.09
Cux1P53564 Rad1-202ENSMUST00000100775 4085 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Cux1P53564 Gm14676-201ENSMUST00000117722 858 ntBASIC15.64■□□□□ 0.09
Cux1P53564 Gm12529-201ENSMUST00000119529 268 ntBASIC15.64■□□□□ 0.09
Cux1P53564 Tnni1-208ENSMUST00000154463 749 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
Cux1P53564 Gm16104-201ENSMUST00000156260 401 ntTSL 2 BASIC15.64■□□□□ 0.09
Cux1P53564 Gm7693-201ENSMUST00000183257 988 ntBASIC15.64■□□□□ 0.09
Cux1P53564 Ints5-203ENSMUST00000191089 568 ntTSL 5 BASIC15.64■□□□□ 0.09
Cux1P53564 Gm43110-201ENSMUST00000198877 226 ntBASIC15.64■□□□□ 0.09
Cux1P53564 Sparc-208ENSMUST00000214685 1269 ntAPPRIS P3 TSL 5 BASIC15.64■□□□□ 0.09
Cux1P53564 4930448C13Rik-205ENSMUST00000221781 806 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Cux1P53564 AC125070.1-201ENSMUST00000223523 555 ntTSL 5 BASIC15.64■□□□□ 0.09
Cux1P53564 Tmem140-201ENSMUST00000074949 2614 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Cux1P53564 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Cux1P53564 Ccdc87-201ENSMUST00000088653 3163 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
Cux1P53564 Eme2-201ENSMUST00000119848 5226 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Cux1P53564 Btbd9-202ENSMUST00000168787 6857 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Cux1P53564 Plekha6-203ENSMUST00000186917 4820 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Cux1P53564 Tom1l2-202ENSMUST00000093046 4849 ntTSL 5 BASIC15.64■□□□□ 0.09
Cux1P53564 Pcsk7-209ENSMUST00000216672 3599 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Cux1P53564 Fam163a-201ENSMUST00000015628 3882 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Cux1P53564 Gm44198-201ENSMUST00000203063 2636 ntBASIC15.64■□□□□ 0.09
Cux1P53564 Mbnl2-204ENSMUST00000227012 2390 ntBASIC15.64■□□□□ 0.09
Cux1P53564 Scmh1-202ENSMUST00000064991 2548 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
Cux1P53564 Gtf2h3-201ENSMUST00000031333 2672 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Cux1P53564 Mir9-3hg-202ENSMUST00000181511 3412 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Cux1P53564 Stra6-213ENSMUST00000167479 2871 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
Cux1P53564 Gm11279-201ENSMUST00000121524 1256 ntBASIC15.63■□□□□ 0.09
Cux1P53564 Gm13938-201ENSMUST00000156809 493 ntTSL 5 BASIC15.63■□□□□ 0.09
Cux1P53564 Gm37118-201ENSMUST00000194328 406 ntTSL 3 BASIC15.63■□□□□ 0.09
Cux1P53564 Gm44744-201ENSMUST00000208234 852 ntTSL 3 BASIC15.63■□□□□ 0.09
Cux1P53564 Calb2-202ENSMUST00000212297 1080 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Cux1P53564 AC153948.2-201ENSMUST00000218112 505 ntBASIC15.63■□□□□ 0.09
Cux1P53564 Pdzk1ip1-201ENSMUST00000030488 1119 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
Cux1P53564 Apex1-201ENSMUST00000049411 1239 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Cux1P53564 Radil-203ENSMUST00000110784 3106 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Cux1P53564 Gm14147-202ENSMUST00000178211 1923 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
Cux1P53564 Cc2d1a-201ENSMUST00000040383 3471 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Cux1P53564 Gm42735-201ENSMUST00000201718 1646 ntBASIC15.63■□□□□ 0.09
Cux1P53564 Arhgef2-207ENSMUST00000175903 3356 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
Cux1P53564 Clec16a-201ENSMUST00000038145 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Cux1P53564 Gm45272-203ENSMUST00000211111 1693 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Cux1P53564 Inpp4a-202ENSMUST00000058307 2963 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Cux1P53564 Tmcc1-210ENSMUST00000204353 2851 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Cux1P53564 Ncstn-201ENSMUST00000003550 2901 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Cux1P53564 Serpina10-202ENSMUST00000121625 1424 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Cux1P53564 Ccl3-201ENSMUST00000001008 766 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Cux1P53564 Gm12774-201ENSMUST00000117881 416 ntBASIC15.63■□□□□ 0.09
Cux1P53564 Gm15033-201ENSMUST00000118188 673 ntBASIC15.63■□□□□ 0.09
Cux1P53564 Vpreb3-202ENSMUST00000121151 729 ntAPPRIS ALT2 TSL 3 BASIC15.63■□□□□ 0.09
Cux1P53564 Gm15777-201ENSMUST00000123463 876 ntTSL 3 BASIC15.63■□□□□ 0.09
Cux1P53564 Gm16552-201ENSMUST00000162348 685 ntTSL 3 BASIC15.63■□□□□ 0.09
Cux1P53564 Gm27395-201ENSMUST00000183938 460 ntBASIC15.63■□□□□ 0.09
Cux1P53564 Gm8391-201ENSMUST00000185632 726 ntBASIC15.63■□□□□ 0.09
Cux1P53564 Gm29266-201ENSMUST00000190392 600 ntTSL 3 BASIC15.63■□□□□ 0.09
Cux1P53564 Gm36973-201ENSMUST00000193942 259 ntBASIC15.63■□□□□ 0.09
Cux1P53564 Gm33815-205ENSMUST00000195574 1204 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
Cux1P53564 Gm18780-201ENSMUST00000209594 574 ntBASIC15.63■□□□□ 0.09
Cux1P53564 AC165159.1-201ENSMUST00000223825 631 ntBASIC15.63■□□□□ 0.09
Cux1P53564 Tssk4-204ENSMUST00000226591 1243 ntAPPRIS ALT2 BASIC15.63■□□□□ 0.09
Cux1P53564 Rps4l-ps-201ENSMUST00000059737 768 ntBASIC15.63■□□□□ 0.09
Cux1P53564 Gm43165-201ENSMUST00000200842 1635 ntBASIC15.63■□□□□ 0.09
Cux1P53564 Slc25a51-201ENSMUST00000107796 4433 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Cux1P53564 Apol7a-204ENSMUST00000176074 2388 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Cux1P53564 Enthd1-201ENSMUST00000096347 2110 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Cux1P53564 Mmp28-202ENSMUST00000103209 3438 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Cux1P53564 Ccdc136-201ENSMUST00000096084 3826 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
Cux1P53564 Metap1-203ENSMUST00000197531 3708 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Cux1P53564 Slc16a7-202ENSMUST00000105257 2238 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Cux1P53564 Etfbkmt-202ENSMUST00000111547 1250 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Cux1P53564 n-R5s175-201ENSMUST00000122599 117 ntBASIC15.62■□□□□ 0.09
Cux1P53564 Dcdc5-203ENSMUST00000126340 396 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Cux1P53564 Gm5459-201ENSMUST00000171235 798 ntBASIC15.62■□□□□ 0.09
Cux1P53564 Mrgprx3-ps-201ENSMUST00000187741 918 ntBASIC15.62■□□□□ 0.09
Cux1P53564 Gm3116-201ENSMUST00000189440 1116 ntBASIC15.62■□□□□ 0.09
Cux1P53564 Gm32102-201ENSMUST00000196885 241 ntBASIC15.62■□□□□ 0.09
Cux1P53564 Gm39128-201ENSMUST00000208237 1094 ntTSL 5 BASIC15.62■□□□□ 0.09
Cux1P53564 Gm18515-201ENSMUST00000219755 797 ntBASIC15.62■□□□□ 0.09
Cux1P53564 Kpna7-202ENSMUST00000110673 2453 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
Cux1P53564 Scamp2-201ENSMUST00000045791 2340 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Cux1P53564 Mitf-201ENSMUST00000043628 1921 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Cux1P53564 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Cux1P53564 Tcf4-240ENSMUST00000201781 2779 ntTSL 5 BASIC15.62■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 46.5 ms