Protein–RNA interactions for Protein: P40240

Cd9, CD9 antigen, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd9P40240 BC017643-202ENSMUST00000106115 2239 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Cd9P40240 Pex5l-204ENSMUST00000108224 2721 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Cd9P40240 Gm42432-201ENSMUST00000197902 1617 ntBASIC10.18□□□□□ -0.78
Cd9P40240 Adcy3-201ENSMUST00000020984 4348 ntAPPRIS P3 TSL 1 (best) BASIC10.18□□□□□ -0.78
Cd9P40240 Gsdmc3-203ENSMUST00000190682 2140 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Cd9P40240 Btn2a2-204ENSMUST00000223877 2109 ntAPPRIS ALT2 BASIC10.18□□□□□ -0.78
Cd9P40240 Lgals9-203ENSMUST00000108269 1586 ntAPPRIS P3 TSL 1 (best) BASIC10.18□□□□□ -0.78
Cd9P40240 Ccna1-201ENSMUST00000029368 1560 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Cd9P40240 Car12-202ENSMUST00000085420 3639 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Cd9P40240 Vipas39-202ENSMUST00000072744 2524 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Cd9P40240 Bfar-201ENSMUST00000023365 3003 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Cd9P40240 Arhgap6-204ENSMUST00000112129 2487 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Cd9P40240 Ippk-202ENSMUST00000220447 4421 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Cd9P40240 Nos2-203ENSMUST00000214397 3429 ntAPPRIS ALT2 TSL 5 BASIC10.17□□□□□ -0.78
Cd9P40240 Tmem87a-201ENSMUST00000090042 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Cd9P40240 Pde2a-201ENSMUST00000163751 4218 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Cd9P40240 Mettl8-204ENSMUST00000112186 2347 ntAPPRIS P2 TSL 2 BASIC10.17□□□□□ -0.78
Cd9P40240 Ltbp2-201ENSMUST00000002073 6769 ntAPPRIS ALT2 TSL 5 BASIC10.17□□□□□ -0.78
Cd9P40240 Cds2-201ENSMUST00000089461 8073 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Cd9P40240 Pcdhb20-201ENSMUST00000052179 3559 ntAPPRIS P1 BASIC10.17□□□□□ -0.78
Cd9P40240 Edil3-202ENSMUST00000081769 5317 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Cd9P40240 Ica1l-205ENSMUST00000189776 1320 ntAPPRIS ALT2 TSL 5 BASIC10.17□□□□□ -0.78
Cd9P40240 BC051665-201ENSMUST00000026078 1348 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Cd9P40240 Lrsam1-201ENSMUST00000028132 3981 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Cd9P40240 Gm23745-201ENSMUST00000104230 125 ntBASIC10.17□□□□□ -0.78
Cd9P40240 Mir1249-201ENSMUST00000116791 98 ntBASIC10.17□□□□□ -0.78
Cd9P40240 Gm11771-201ENSMUST00000118124 732 ntBASIC10.17□□□□□ -0.78
Cd9P40240 Gm15620-201ENSMUST00000122949 270 ntBASIC10.17□□□□□ -0.78
Cd9P40240 Tspan32os-201ENSMUST00000131740 975 ntTSL 2 BASIC10.17□□□□□ -0.78
Cd9P40240 Bach2os-202ENSMUST00000136149 687 ntTSL 2 BASIC10.17□□□□□ -0.78
Cd9P40240 Gm12916-201ENSMUST00000139012 948 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Cd9P40240 Gm16347-202ENSMUST00000149000 772 ntTSL 3 BASIC10.17□□□□□ -0.78
Cd9P40240 Prdx2-208ENSMUST00000164807 1175 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Cd9P40240 C430039J16Rik-201ENSMUST00000181148 658 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Cd9P40240 Gm6771-201ENSMUST00000182716 1001 ntBASIC10.17□□□□□ -0.78
Cd9P40240 Gm37144-201ENSMUST00000195445 1150 ntBASIC10.17□□□□□ -0.78
Cd9P40240 4931431B13Rik-202ENSMUST00000205646 473 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Cd9P40240 AC242269.1-201ENSMUST00000227020 741 ntBASIC10.17□□□□□ -0.78
Cd9P40240 AC107711.1-201ENSMUST00000227258 1295 ntBASIC10.17□□□□□ -0.78
Cd9P40240 Gm4604-201ENSMUST00000025040 390 ntBASIC10.17□□□□□ -0.78
Cd9P40240 4930533K18Rik-201ENSMUST00000058942 1259 ntTSL 5 BASIC10.17□□□□□ -0.78
Cd9P40240 Mrgpra1-201ENSMUST00000098438 1088 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Cd9P40240 Slc40a1-201ENSMUST00000027137 3370 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Cd9P40240 Tbp-203ENSMUST00000118001 1652 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Cd9P40240 Gm13920-201ENSMUST00000146134 1663 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Cd9P40240 4930478P22Rik-203ENSMUST00000202026 2060 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Cd9P40240 Arhgef9-204ENSMUST00000113882 2445 ntAPPRIS ALT2 TSL 5 BASIC10.17□□□□□ -0.78
Cd9P40240 Ilf3-208ENSMUST00000214758 3177 ntAPPRIS ALT2 TSL 5 BASIC10.17□□□□□ -0.78
Cd9P40240 Gm14164-202ENSMUST00000128577 1999 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Cd9P40240 Ppm1b-203ENSMUST00000112305 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Cd9P40240 Arih2-201ENSMUST00000013338 3924 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Cd9P40240 Smarca2-209ENSMUST00000176030 5862 ntAPPRIS ALT2 TSL 5 BASIC10.17□□□□□ -0.78
Cd9P40240 Ilf3-203ENSMUST00000213518 3513 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Cd9P40240 Gm15535-202ENSMUST00000148478 1519 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Cd9P40240 Car13-201ENSMUST00000029071 2299 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Cd9P40240 Pdp2-201ENSMUST00000059588 5692 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Cd9P40240 Arfgef3-201ENSMUST00000019999 5606 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Cd9P40240 Sgca-201ENSMUST00000100551 1465 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Cd9P40240 Ppp6c-205ENSMUST00000204701 1495 ntTSL 5 BASIC10.17□□□□□ -0.78
Cd9P40240 Gm9271-201ENSMUST00000185988 2580 ntBASIC10.17□□□□□ -0.78
Cd9P40240 Tbce-201ENSMUST00000039894 1844 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Cd9P40240 Atp6v0a4-201ENSMUST00000040259 3285 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Cd9P40240 Tgm7-201ENSMUST00000110675 2151 ntAPPRIS P1 TSL 5 BASIC10.16□□□□□ -0.78
Cd9P40240 Isx-201ENSMUST00000034034 1793 ntAPPRIS P3 TSL 1 (best) BASIC10.16□□□□□ -0.78
Cd9P40240 Sun1-204ENSMUST00000110882 2454 ntAPPRIS ALT2 TSL 5 BASIC10.16□□□□□ -0.78
Cd9P40240 Gm43412-201ENSMUST00000197455 2818 ntBASIC10.16□□□□□ -0.78
Cd9P40240 Casq2-205ENSMUST00000165540 2434 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Cd9P40240 Dnm3-202ENSMUST00000086074 7523 ntAPPRIS ALT2 TSL 5 BASIC10.16□□□□□ -0.78
Cd9P40240 Rassf4-201ENSMUST00000035842 6460 ntAPPRIS P2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Cd9P40240 Nrap-204ENSMUST00000166203 5079 ntAPPRIS ALT2 TSL 5 BASIC10.16□□□□□ -0.78
Cd9P40240 Rtn3-202ENSMUST00000065304 5030 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Cd9P40240 Rapgef2-206ENSMUST00000195708 6964 ntAPPRIS P1 TSL 5 BASIC10.16□□□□□ -0.78
Cd9P40240 Zscan21-203ENSMUST00000110959 2964 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Cd9P40240 Gpm6b-205ENSMUST00000112227 3294 ntAPPRIS ALT1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Cd9P40240 Eml5-201ENSMUST00000065716 9482 ntTSL 5 BASIC10.16□□□□□ -0.78
Cd9P40240 Klra9-202ENSMUST00000112032 1279 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Cd9P40240 Gm11996-201ENSMUST00000117538 915 ntBASIC10.16□□□□□ -0.78
Cd9P40240 Gm12816-201ENSMUST00000118069 1212 ntBASIC10.16□□□□□ -0.78
Cd9P40240 Gstm1-202ENSMUST00000126593 828 ntTSL 3 BASIC10.16□□□□□ -0.78
Cd9P40240 Gm5860-201ENSMUST00000137810 1028 ntTSL 2 BASIC10.16□□□□□ -0.78
Cd9P40240 Eif4e1b-210ENSMUST00000152204 859 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Cd9P40240 Gm13938-201ENSMUST00000156809 493 ntTSL 5 BASIC10.16□□□□□ -0.78
Cd9P40240 Nkx2-2os-202ENSMUST00000184407 458 ntBASIC10.16□□□□□ -0.78
Cd9P40240 1700019D03Rik-206ENSMUST00000190831 653 ntAPPRIS P1 TSL 2 BASIC10.16□□□□□ -0.78
Cd9P40240 Gm37944-201ENSMUST00000194233 414 ntBASIC10.16□□□□□ -0.78
Cd9P40240 Gm37963-201ENSMUST00000195351 613 ntTSL 3 BASIC10.16□□□□□ -0.78
Cd9P40240 Pf4-203ENSMUST00000202625 411 ntTSL 2 BASIC10.16□□□□□ -0.78
Cd9P40240 Gm44939-201ENSMUST00000206939 814 ntTSL 3 BASIC10.16□□□□□ -0.78
Cd9P40240 Gm35713-201ENSMUST00000210516 199 ntBASIC10.16□□□□□ -0.78
Cd9P40240 Nosip-207ENSMUST00000210520 534 ntAPPRIS ALT2 TSL 5 BASIC10.16□□□□□ -0.78
Cd9P40240 Pbld1-206ENSMUST00000219687 788 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Cd9P40240 Gpr137b-ps-202ENSMUST00000220647 1159 ntBASIC10.16□□□□□ -0.78
Cd9P40240 Klra9-201ENSMUST00000071554 1123 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Cd9P40240 Anapc15-213ENSMUST00000178851 2797 ntTSL 2 BASIC10.16□□□□□ -0.78
Cd9P40240 Eno2-201ENSMUST00000004378 2795 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Cd9P40240 Zfp111-202ENSMUST00000073833 3079 ntAPPRIS P3 TSL 5 BASIC10.16□□□□□ -0.78
Cd9P40240 Gm7356-201ENSMUST00000186636 1527 ntAPPRIS P1 BASIC10.16□□□□□ -0.78
Cd9P40240 Gm7358-201ENSMUST00000189454 1527 ntBASIC10.16□□□□□ -0.78
Cd9P40240 Kcnip3-203ENSMUST00000103215 2732 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Cd9P40240 Kcnip3-201ENSMUST00000028850 2728 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Retrieved 100 of 76,532 protein–RNA pairs in 81.6 ms