Protein–RNA interactions for Protein: B2RUQ2

Usf3, Gene model 608, (NCBI), mousemouse

Predictions only

Length 2,221 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usf3B2RUQ2 Dhx35-202ENSMUST00000109478 3284 ntAPPRIS P1 TSL 5 BASIC8.66□□□□□ -1.02
Usf3B2RUQ2 Eno2-202ENSMUST00000112476 2386 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
Usf3B2RUQ2 Gm15965-201ENSMUST00000123318 1428 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
Usf3B2RUQ2 Gm8873-201ENSMUST00000217847 1439 ntBASIC8.66□□□□□ -1.02
Usf3B2RUQ2 Ccdc130-201ENSMUST00000005120 1441 ntAPPRIS ALT2 TSL 5 BASIC8.66□□□□□ -1.02
Usf3B2RUQ2 Serpina3g-201ENSMUST00000043315 1803 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Usf3B2RUQ2 Arhgap24-202ENSMUST00000073302 3151 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
Usf3B2RUQ2 Dppa3-ps-201ENSMUST00000116499 451 ntBASIC8.66□□□□□ -1.02
Usf3B2RUQ2 Gm11473-201ENSMUST00000118980 359 ntBASIC8.66□□□□□ -1.02
Usf3B2RUQ2 Mir1893-201ENSMUST00000122565 83 ntBASIC8.66□□□□□ -1.02
Usf3B2RUQ2 Gm12224-201ENSMUST00000124047 567 ntTSL 2 BASIC8.66□□□□□ -1.02
Usf3B2RUQ2 Gm6352-201ENSMUST00000203583 1134 ntBASIC8.66□□□□□ -1.02
Usf3B2RUQ2 E230034D01Rik-203ENSMUST00000217357 1159 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
Usf3B2RUQ2 Gm3137-201ENSMUST00000218177 620 ntTSL 3 BASIC8.66□□□□□ -1.02
Usf3B2RUQ2 Gm5040-201ENSMUST00000218609 800 ntBASIC8.66□□□□□ -1.02
Usf3B2RUQ2 BX649293.1-201ENSMUST00000227437 631 ntBASIC8.66□□□□□ -1.02
Usf3B2RUQ2 Prss1-201ENSMUST00000031910 805 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Usf3B2RUQ2 Gm5278-201ENSMUST00000055957 552 ntBASIC8.66□□□□□ -1.02
Usf3B2RUQ2 Zfp141-203ENSMUST00000174407 4069 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Usf3B2RUQ2 AC122291.1-201ENSMUST00000228937 5748 ntBASIC8.66□□□□□ -1.02
Usf3B2RUQ2 Loxl4-201ENSMUST00000026190 3738 ntAPPRIS P3 TSL 1 (best) BASIC8.66□□□□□ -1.02
Usf3B2RUQ2 Serpinb6a-203ENSMUST00000076532 1504 ntAPPRIS P1 TSL 5 BASIC8.66□□□□□ -1.02
Usf3B2RUQ2 Ubap2-202ENSMUST00000108068 4380 ntAPPRIS ALT2 TSL 1 (best) BASIC8.66□□□□□ -1.02
Usf3B2RUQ2 Gfra2-203ENSMUST00000227697 1323 ntBASIC8.66□□□□□ -1.02
Usf3B2RUQ2 Pex5-203ENSMUST00000112530 3051 ntTSL 5 BASIC8.66□□□□□ -1.02
Usf3B2RUQ2 Adam1b-201ENSMUST00000079368 3338 ntAPPRIS P1 BASIC8.66□□□□□ -1.02
Usf3B2RUQ2 Gm32742-201ENSMUST00000210433 8516 ntAPPRIS P1 TSL 5 BASIC8.66□□□□□ -1.02
Usf3B2RUQ2 Calr4-201ENSMUST00000030285 1606 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Usf3B2RUQ2 Mtmr11-201ENSMUST00000054356 2778 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
Usf3B2RUQ2 Evc-203ENSMUST00000114154 3695 ntAPPRIS ALT2 TSL 1 (best) BASIC8.65□□□□□ -1.02
Usf3B2RUQ2 Ccdc136-202ENSMUST00000115275 3279 ntAPPRIS ALT2 TSL 5 BASIC8.65□□□□□ -1.02
Usf3B2RUQ2 Rasgef1a-203ENSMUST00000203804 2183 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
Usf3B2RUQ2 Sh3gl2-202ENSMUST00000107184 671 ntTSL 2 BASIC8.65□□□□□ -1.02
Usf3B2RUQ2 Lime1-202ENSMUST00000108804 960 ntTSL 3 BASIC8.65□□□□□ -1.02
Usf3B2RUQ2 4930412O13Rik-202ENSMUST00000114919 558 ntAPPRIS ALT2 TSL 2 BASIC8.65□□□□□ -1.02
Usf3B2RUQ2 Sfi1-204ENSMUST00000118627 831 ntAPPRIS ALT2 TSL 1 (best) BASIC8.65□□□□□ -1.02
Usf3B2RUQ2 Ywhaq-ps3-201ENSMUST00000120944 738 ntBASIC8.65□□□□□ -1.02
Usf3B2RUQ2 4930533B01Rik-201ENSMUST00000123377 1029 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
Usf3B2RUQ2 Gm13817-201ENSMUST00000142249 604 ntTSL 3 BASIC8.65□□□□□ -1.02
Usf3B2RUQ2 Gm4778-202ENSMUST00000159517 1241 ntAPPRIS P1 TSL 5 BASIC8.65□□□□□ -1.02
Usf3B2RUQ2 AU015836-205ENSMUST00000163458 911 ntAPPRIS P1 TSL 5 BASIC8.65□□□□□ -1.02
Usf3B2RUQ2 Scgb2b27-203ENSMUST00000185399 702 ntAPPRIS ALT2 TSL 2 BASIC8.65□□□□□ -1.02
Usf3B2RUQ2 Gm44498-201ENSMUST00000199509 111 ntBASIC8.65□□□□□ -1.02
Usf3B2RUQ2 Gm42689-201ENSMUST00000202403 404 ntBASIC8.65□□□□□ -1.02
Usf3B2RUQ2 Gm9619-201ENSMUST00000211587 762 ntBASIC8.65□□□□□ -1.02
Usf3B2RUQ2 AC154347.2-201ENSMUST00000221223 715 ntTSL 3 BASIC8.65□□□□□ -1.02
Usf3B2RUQ2 Ggta1-201ENSMUST00000044255 1221 ntAPPRIS P3 TSL 5 BASIC8.65□□□□□ -1.02
Usf3B2RUQ2 Ms4a7-202ENSMUST00000056035 882 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
Usf3B2RUQ2 Rps18-201ENSMUST00000008812 600 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
Usf3B2RUQ2 Gm4778-201ENSMUST00000098878 1098 ntBASIC8.65□□□□□ -1.02
Usf3B2RUQ2 4732487G21Rik-201ENSMUST00000181495 2664 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
Usf3B2RUQ2 Acer2-202ENSMUST00000084433 4060 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
Usf3B2RUQ2 Gm10684-201ENSMUST00000098827 2203 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
Usf3B2RUQ2 Fhitos-201ENSMUST00000160149 1511 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
Usf3B2RUQ2 Cep70-207ENSMUST00000190715 1768 ntAPPRIS ALT2 TSL 1 (best) BASIC8.65□□□□□ -1.02
Usf3B2RUQ2 Gm45699-201ENSMUST00000212838 1576 ntTSL 2 BASIC8.65□□□□□ -1.02
Usf3B2RUQ2 Commd1-204ENSMUST00000159081 4508 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
Usf3B2RUQ2 Lhfpl2-201ENSMUST00000054274 4348 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
Usf3B2RUQ2 Psmf1-202ENSMUST00000109869 1384 ntAPPRIS P1 TSL 5 BASIC8.65□□□□□ -1.02
Usf3B2RUQ2 Prr13-205ENSMUST00000171245 1353 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
Usf3B2RUQ2 H2-M10.1-201ENSMUST00000025322 1394 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
Usf3B2RUQ2 Fam53a-203ENSMUST00000065162 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC8.65□□□□□ -1.02
Usf3B2RUQ2 Gm15631-201ENSMUST00000142962 2436 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
Usf3B2RUQ2 Napepld-202ENSMUST00000115217 3954 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
Usf3B2RUQ2 Prnd-201ENSMUST00000110169 1918 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
Usf3B2RUQ2 Olfr95-201ENSMUST00000060728 5129 ntAPPRIS P1 BASIC8.65□□□□□ -1.02
Usf3B2RUQ2 Cad-203ENSMUST00000200953 6489 ntTSL 5 BASIC8.65□□□□□ -1.02
Usf3B2RUQ2 AI606181-201ENSMUST00000099454 2796 ntAPPRIS P1 BASIC8.65□□□□□ -1.02
Usf3B2RUQ2 Pced1b-204ENSMUST00000228521 1790 ntAPPRIS P1 BASIC8.65□□□□□ -1.03
Usf3B2RUQ2 Ankrd31-203ENSMUST00000208758 5859 ntTSL 5 BASIC8.65□□□□□ -1.03
Usf3B2RUQ2 Scn10a-201ENSMUST00000084787 6416 ntAPPRIS P2 TSL 5 BASIC8.65□□□□□ -1.03
Usf3B2RUQ2 Amer3-201ENSMUST00000052670 4392 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.03
Usf3B2RUQ2 Cd300ld5-201ENSMUST00000100239 852 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.03
Usf3B2RUQ2 Cd300ld4-201ENSMUST00000100240 852 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.03
Usf3B2RUQ2 Pfn1-202ENSMUST00000108549 608 ntTSL 2 BASIC8.65□□□□□ -1.03
Usf3B2RUQ2 Erg-209ENSMUST00000177450 1280 ntTSL 5 BASIC8.65□□□□□ -1.03
Usf3B2RUQ2 Gm38349-201ENSMUST00000195732 462 ntBASIC8.65□□□□□ -1.03
Usf3B2RUQ2 Gm3527-201ENSMUST00000198905 460 ntBASIC8.65□□□□□ -1.03
Usf3B2RUQ2 AC154433.1-201ENSMUST00000224401 1183 ntBASIC8.65□□□□□ -1.03
Usf3B2RUQ2 Cd300ld3-201ENSMUST00000092459 852 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.03
Usf3B2RUQ2 Gpatch2-204ENSMUST00000110943 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC8.65□□□□□ -1.03
Usf3B2RUQ2 Erlin2-201ENSMUST00000033873 4838 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.03
Usf3B2RUQ2 Kir3dl2-202ENSMUST00000113108 1932 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.03
Usf3B2RUQ2 Eef1b2-204ENSMUST00000129339 1939 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.03
Usf3B2RUQ2 Gemin8-202ENSMUST00000087169 1928 ntAPPRIS P3 TSL 1 (best) BASIC8.65□□□□□ -1.03
Usf3B2RUQ2 Gm43597-202ENSMUST00000201992 4620 ntTSL 1 (best) BASIC8.65□□□□□ -1.03
Usf3B2RUQ2 Zfp775-203ENSMUST00000204095 4143 ntAPPRIS P1 TSL 2 BASIC8.65□□□□□ -1.03
Usf3B2RUQ2 Trh-201ENSMUST00000006046 1384 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.03
Usf3B2RUQ2 5730422E09Rik-201ENSMUST00000180733 1740 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
Usf3B2RUQ2 Zc2hc1a-203ENSMUST00000193010 1420 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
Usf3B2RUQ2 Gm43321-201ENSMUST00000198897 2409 ntBASIC8.64□□□□□ -1.03
Usf3B2RUQ2 Mapre2-203ENSMUST00000118826 3052 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
Usf3B2RUQ2 Ppp4r1l-ps-202ENSMUST00000132669 2767 ntBASIC8.64□□□□□ -1.03
Usf3B2RUQ2 Adra1a-205ENSMUST00000161339 2788 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Usf3B2RUQ2 Gm15604-201ENSMUST00000118350 1456 ntBASIC8.64□□□□□ -1.03
Usf3B2RUQ2 Ephb4-202ENSMUST00000111054 3784 ntTSL 5 BASIC8.64□□□□□ -1.03
Usf3B2RUQ2 Gm37909-201ENSMUST00000193157 2159 ntBASIC8.64□□□□□ -1.03
Usf3B2RUQ2 Gm39464-201ENSMUST00000214091 2169 ntTSL 5 BASIC8.64□□□□□ -1.03
Usf3B2RUQ2 Col11a1-201ENSMUST00000092155 7667 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Usf3B2RUQ2 Clp1-203ENSMUST00000165219 2564 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Retrieved 100 of 76,532 protein–RNA pairs in 88.7 ms