Protein–RNA interactions for Protein: Q9JLR1

Sec61a2, Protein transport protein Sec61 subunit alpha isoform 2, mousemouse

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a2Q9JLR1 4930517L18Rik-201ENSMUST00000191880 482 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Sec61a2Q9JLR1 Gm34379-201ENSMUST00000195036 290 ntBASIC9.33□□□□□ -0.92
Sec61a2Q9JLR1 Gm44605-201ENSMUST00000206892 949 ntBASIC9.33□□□□□ -0.92
Sec61a2Q9JLR1 Gm3433-201ENSMUST00000210149 1058 ntBASIC9.33□□□□□ -0.92
Sec61a2Q9JLR1 Gm35713-201ENSMUST00000210516 199 ntBASIC9.33□□□□□ -0.92
Sec61a2Q9JLR1 Gm6390-201ENSMUST00000215034 589 ntBASIC9.33□□□□□ -0.92
Sec61a2Q9JLR1 CT010480.2-201ENSMUST00000225424 737 ntBASIC9.33□□□□□ -0.92
Sec61a2Q9JLR1 AC130477.1-201ENSMUST00000226982 420 ntBASIC9.33□□□□□ -0.92
Sec61a2Q9JLR1 Myf6-201ENSMUST00000044210 1263 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Sec61a2Q9JLR1 Rpl3l-201ENSMUST00000045186 1033 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Sec61a2Q9JLR1 Krtap19-9b-201ENSMUST00000077715 461 ntAPPRIS P1 BASIC9.33□□□□□ -0.92
Sec61a2Q9JLR1 Hsd3b1-202ENSMUST00000107016 1855 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Sec61a2Q9JLR1 Htr5a-201ENSMUST00000036227 5376 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Sec61a2Q9JLR1 Lrrn4cl-201ENSMUST00000096257 2583 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Sec61a2Q9JLR1 Gm42858-201ENSMUST00000202512 1704 ntBASIC9.33□□□□□ -0.92
Sec61a2Q9JLR1 Map4-204ENSMUST00000164930 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC9.33□□□□□ -0.92
Sec61a2Q9JLR1 Oma1-201ENSMUST00000035780 1915 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Sec61a2Q9JLR1 Pds5a-201ENSMUST00000031104 4146 ntAPPRIS P1 TSL 5 BASIC9.33□□□□□ -0.92
Sec61a2Q9JLR1 Sdhaf3-201ENSMUST00000040826 4323 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Sec61a2Q9JLR1 Exoc4-202ENSMUST00000090381 2598 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Sec61a2Q9JLR1 Bfar-201ENSMUST00000023365 3003 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Sec61a2Q9JLR1 Gm11986-201ENSMUST00000149481 1439 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Sec61a2Q9JLR1 Ppp2r2a-201ENSMUST00000089230 4010 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Sec61a2Q9JLR1 Pklr-201ENSMUST00000047111 2787 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Sec61a2Q9JLR1 Gm7052-201ENSMUST00000167568 1512 ntBASIC9.32□□□□□ -0.92
Sec61a2Q9JLR1 Nr1h4-201ENSMUST00000058126 1964 ntAPPRIS P3 TSL 1 (best) BASIC9.32□□□□□ -0.92
Sec61a2Q9JLR1 AC158779.1-201ENSMUST00000228912 3861 ntBASIC9.32□□□□□ -0.92
Sec61a2Q9JLR1 Cacna2d1-204ENSMUST00000115281 3412 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Sec61a2Q9JLR1 Tmprss11c-201ENSMUST00000059424 1615 ntAPPRIS P2 TSL 1 (best) BASIC9.32□□□□□ -0.92
Sec61a2Q9JLR1 AC144938.1-201ENSMUST00000223994 2167 ntBASIC9.32□□□□□ -0.92
Sec61a2Q9JLR1 Ccdc60-202ENSMUST00000086483 2168 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Sec61a2Q9JLR1 Prrc1-201ENSMUST00000025490 4801 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Sec61a2Q9JLR1 Gm5764-201ENSMUST00000118817 885 ntBASIC9.32□□□□□ -0.92
Sec61a2Q9JLR1 Gm6758-201ENSMUST00000119643 1055 ntBASIC9.32□□□□□ -0.92
Sec61a2Q9JLR1 Syngr4-202ENSMUST00000120299 722 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Sec61a2Q9JLR1 Gm12950-201ENSMUST00000121683 417 ntBASIC9.32□□□□□ -0.92
Sec61a2Q9JLR1 Gm14006-201ENSMUST00000122132 981 ntBASIC9.32□□□□□ -0.92
Sec61a2Q9JLR1 Gm16217-201ENSMUST00000124182 616 ntTSL 3 BASIC9.32□□□□□ -0.92
Sec61a2Q9JLR1 Tmem229b-ps-201ENSMUST00000168554 506 ntBASIC9.32□□□□□ -0.92
Sec61a2Q9JLR1 Anapc16-203ENSMUST00000182152 847 ntTSL 2 BASIC9.32□□□□□ -0.92
Sec61a2Q9JLR1 Gm19331-201ENSMUST00000193799 1092 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Sec61a2Q9JLR1 4931419H13Rik-201ENSMUST00000199770 973 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Sec61a2Q9JLR1 Gm18463-201ENSMUST00000207258 474 ntBASIC9.32□□□□□ -0.92
Sec61a2Q9JLR1 Gm18460-201ENSMUST00000208088 464 ntBASIC9.32□□□□□ -0.92
Sec61a2Q9JLR1 Gm45388-201ENSMUST00000209922 1132 ntTSL 5 BASIC9.32□□□□□ -0.92
Sec61a2Q9JLR1 Gm4903-201ENSMUST00000210462 405 ntBASIC9.32□□□□□ -0.92
Sec61a2Q9JLR1 1700012D14Rik-204ENSMUST00000210788 547 ntTSL 3 BASIC9.32□□□□□ -0.92
Sec61a2Q9JLR1 Gstz1-203ENSMUST00000220574 971 ntTSL 2 BASIC9.32□□□□□ -0.92
Sec61a2Q9JLR1 AC137950.2-201ENSMUST00000227127 1089 ntBASIC9.32□□□□□ -0.92
Sec61a2Q9JLR1 Atp6v1e2-201ENSMUST00000065758 1005 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Sec61a2Q9JLR1 Olfr293-201ENSMUST00000081474 1011 ntAPPRIS P1 BASIC9.32□□□□□ -0.92
Sec61a2Q9JLR1 Taar5-201ENSMUST00000092659 1014 ntAPPRIS P1 BASIC9.32□□□□□ -0.92
Sec61a2Q9JLR1 Aven-202ENSMUST00000099588 791 ntAPPRIS ALT2 TSL 3 BASIC9.32□□□□□ -0.92
Sec61a2Q9JLR1 Htr1a-201ENSMUST00000022235 4484 ntAPPRIS P1 BASIC9.32□□□□□ -0.92
Sec61a2Q9JLR1 Tyw3-201ENSMUST00000052774 4490 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Sec61a2Q9JLR1 Ank1-215ENSMUST00000173248 7100 ntAPPRIS ALT2 TSL 1 (best) BASIC9.32□□□□□ -0.92
Sec61a2Q9JLR1 Grb10-202ENSMUST00000109653 2048 ntTSL 5 BASIC9.32□□□□□ -0.92
Sec61a2Q9JLR1 Fyn-205ENSMUST00000135242 2114 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Sec61a2Q9JLR1 Stra6-213ENSMUST00000167479 2871 ntAPPRIS P1 TSL 5 BASIC9.32□□□□□ -0.92
Sec61a2Q9JLR1 Rab27a-201ENSMUST00000034722 2979 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Sec61a2Q9JLR1 Cyp2g1-201ENSMUST00000040944 1896 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Sec61a2Q9JLR1 Zfp948-201ENSMUST00000088787 2612 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Sec61a2Q9JLR1 Casz1-201ENSMUST00000094464 4349 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Sec61a2Q9JLR1 Gatb-203ENSMUST00000107674 1980 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Sec61a2Q9JLR1 Diexf-201ENSMUST00000085555 5570 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Sec61a2Q9JLR1 Vash2-202ENSMUST00000166139 3897 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Sec61a2Q9JLR1 Rangap1-202ENSMUST00000170134 3002 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Sec61a2Q9JLR1 Odf2-207ENSMUST00000113762 2353 ntTSL 5 BASIC9.31□□□□□ -0.92
Sec61a2Q9JLR1 Ano4-202ENSMUST00000181976 1410 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Sec61a2Q9JLR1 Eng-205ENSMUST00000167841 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC9.31□□□□□ -0.92
Sec61a2Q9JLR1 Gm37583-201ENSMUST00000195460 2487 ntBASIC9.31□□□□□ -0.92
Sec61a2Q9JLR1 Cd247-205ENSMUST00000161559 1816 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Sec61a2Q9JLR1 Nedd4-201ENSMUST00000034740 5499 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Sec61a2Q9JLR1 Tnk2-206ENSMUST00000115125 4313 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Sec61a2Q9JLR1 Slx1b-203ENSMUST00000144897 3152 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Sec61a2Q9JLR1 Cdk12-201ENSMUST00000003203 4837 ntAPPRIS P3 TSL 1 (best) BASIC9.31□□□□□ -0.92
Sec61a2Q9JLR1 Zfp418-201ENSMUST00000051435 2725 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Sec61a2Q9JLR1 Piwil1-202ENSMUST00000195959 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC9.31□□□□□ -0.92
Sec61a2Q9JLR1 Celsr3-201ENSMUST00000024238 11547 ntAPPRIS P2 TSL 1 (best) BASIC9.31□□□□□ -0.92
Sec61a2Q9JLR1 Dmrtc1b-201ENSMUST00000101324 1200 ntAPPRIS P3 TSL 1 (best) BASIC9.31□□□□□ -0.92
Sec61a2Q9JLR1 Gm25880-201ENSMUST00000104331 132 ntBASIC9.31□□□□□ -0.92
Sec61a2Q9JLR1 Ifitm1-202ENSMUST00000106040 560 ntAPPRIS P1 TSL 3 BASIC9.31□□□□□ -0.92
Sec61a2Q9JLR1 Ifitm1-203ENSMUST00000106042 882 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Sec61a2Q9JLR1 Banf2-202ENSMUST00000110032 409 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Sec61a2Q9JLR1 Gm3409-202ENSMUST00000110599 1154 ntAPPRIS P2 TSL 5 BASIC9.31□□□□□ -0.92
Sec61a2Q9JLR1 Styxl1-203ENSMUST00000111162 726 ntTSL 5 BASIC9.31□□□□□ -0.92
Sec61a2Q9JLR1 Dmrtc1b-202ENSMUST00000113609 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC9.31□□□□□ -0.92
Sec61a2Q9JLR1 Klra4-201ENSMUST00000119096 1245 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Sec61a2Q9JLR1 Gm15285-201ENSMUST00000119271 473 ntBASIC9.31□□□□□ -0.92
Sec61a2Q9JLR1 Saxo2-202ENSMUST00000126478 430 ntAPPRIS ALT2 TSL 1 (best) BASIC9.31□□□□□ -0.92
Sec61a2Q9JLR1 Nudt12os-201ENSMUST00000145848 939 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Sec61a2Q9JLR1 Gm42791-202ENSMUST00000147473 727 ntAPPRIS P1 TSL 5 BASIC9.31□□□□□ -0.92
Sec61a2Q9JLR1 Atad3aos-202ENSMUST00000150777 650 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Sec61a2Q9JLR1 Gm20822-201ENSMUST00000165756 687 ntAPPRIS P1 BASIC9.31□□□□□ -0.92
Sec61a2Q9JLR1 Gm9372-201ENSMUST00000168454 430 ntBASIC9.31□□□□□ -0.92
Sec61a2Q9JLR1 Gm20828-201ENSMUST00000170889 687 ntAPPRIS P1 BASIC9.31□□□□□ -0.92
Sec61a2Q9JLR1 Gm18733-202ENSMUST00000174447 401 ntBASIC9.31□□□□□ -0.92
Sec61a2Q9JLR1 Gm23647-201ENSMUST00000175042 109 ntBASIC9.31□□□□□ -0.92
Sec61a2Q9JLR1 Rn5s-201ENSMUST00000177555 119 ntBASIC9.31□□□□□ -0.92
Sec61a2Q9JLR1 n-R5s108-201ENSMUST00000177575 119 ntBASIC9.31□□□□□ -0.92
Retrieved 100 of 76,532 protein–RNA pairs in 35.5 ms