Protein–RNA interactions for Protein: Q9DB34

Chmp2a, Charged multivesicular body protein 2a, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2aQ9DB34 Gm3527-201ENSMUST00000198905 460 ntBASIC10.79□□□□□ -0.68
Chmp2aQ9DB34 Nras-208ENSMUST00000200069 831 ntAPPRIS P1 TSL 2 BASIC10.79□□□□□ -0.68
Chmp2aQ9DB34 Gm45542-201ENSMUST00000210456 438 ntTSL 2 BASIC10.79□□□□□ -0.68
Chmp2aQ9DB34 Gm7192-201ENSMUST00000210793 1137 ntBASIC10.79□□□□□ -0.68
Chmp2aQ9DB34 Gpr137b-ps-202ENSMUST00000220647 1159 ntBASIC10.79□□□□□ -0.68
Chmp2aQ9DB34 Gm3926-201ENSMUST00000223378 1123 ntBASIC10.79□□□□□ -0.68
Chmp2aQ9DB34 Ptma-201ENSMUST00000045897 1216 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Chmp2aQ9DB34 Tnfrsf9-202ENSMUST00000060901 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Chmp2aQ9DB34 Pcdhb10-201ENSMUST00000051126 2851 ntAPPRIS P1 BASIC10.79□□□□□ -0.68
Chmp2aQ9DB34 Wnt5a-202ENSMUST00000112272 3650 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Chmp2aQ9DB34 Gm38115-201ENSMUST00000194317 2413 ntTSL 5 BASIC10.79□□□□□ -0.68
Chmp2aQ9DB34 Rpap2-204ENSMUST00000112654 2914 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Chmp2aQ9DB34 Gm17244-201ENSMUST00000192482 3416 ntBASIC10.79□□□□□ -0.68
Chmp2aQ9DB34 Pex13-201ENSMUST00000020523 4146 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Chmp2aQ9DB34 Tpp2-207ENSMUST00000188313 4631 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Chmp2aQ9DB34 Adar-205ENSMUST00000121094 2321 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Chmp2aQ9DB34 Gm15482-201ENSMUST00000152691 4529 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Chmp2aQ9DB34 Gpatch2-204ENSMUST00000110943 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Chmp2aQ9DB34 Trp63-207ENSMUST00000115308 2380 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Chmp2aQ9DB34 Gm29773-201ENSMUST00000212751 1895 ntTSL 2 BASIC10.78□□□□□ -0.68
Chmp2aQ9DB34 Zeb2-203ENSMUST00000076836 3913 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
Chmp2aQ9DB34 E030026E10Rik-201ENSMUST00000200395 2217 ntBASIC10.78□□□□□ -0.68
Chmp2aQ9DB34 Tmprss7-201ENSMUST00000114562 2587 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Chmp2aQ9DB34 Cdc23-203ENSMUST00000133181 4133 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Chmp2aQ9DB34 Acp1-202ENSMUST00000074038 2754 ntAPPRIS ALT1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Chmp2aQ9DB34 Msrb3-201ENSMUST00000092143 3843 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Chmp2aQ9DB34 Gm39117-201ENSMUST00000207692 1569 ntTSL 5 BASIC10.78□□□□□ -0.68
Chmp2aQ9DB34 Psmc1-201ENSMUST00000021595 1591 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Chmp2aQ9DB34 Ddx52-201ENSMUST00000049257 3194 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Chmp2aQ9DB34 Ralgps1-204ENSMUST00000113165 6192 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
Chmp2aQ9DB34 Ptpn21-201ENSMUST00000085116 5696 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Chmp2aQ9DB34 Pcdhb20-201ENSMUST00000052179 3559 ntAPPRIS P1 BASIC10.78□□□□□ -0.68
Chmp2aQ9DB34 Cd177-201ENSMUST00000063956 2714 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Chmp2aQ9DB34 Mir291b-201ENSMUST00000104838 79 ntBASIC10.78□□□□□ -0.68
Chmp2aQ9DB34 Pdzk1ip1-202ENSMUST00000106548 887 ntAPPRIS P3 TSL 1 (best) BASIC10.78□□□□□ -0.68
Chmp2aQ9DB34 Paip2-202ENSMUST00000115734 815 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
Chmp2aQ9DB34 Gm15285-201ENSMUST00000119271 473 ntBASIC10.78□□□□□ -0.68
Chmp2aQ9DB34 Gm12489-201ENSMUST00000119364 148 ntBASIC10.78□□□□□ -0.68
Chmp2aQ9DB34 Gm23081-201ENSMUST00000157845 297 ntBASIC10.78□□□□□ -0.68
Chmp2aQ9DB34 Gm4862-201ENSMUST00000170405 438 ntBASIC10.78□□□□□ -0.68
Chmp2aQ9DB34 Tcl1-203ENSMUST00000175652 535 ntTSL 2 BASIC10.78□□□□□ -0.68
Chmp2aQ9DB34 Glmp-207ENSMUST00000176425 960 ntTSL 5 BASIC10.78□□□□□ -0.68
Chmp2aQ9DB34 Arl14-201ENSMUST00000183126 1200 ntAPPRIS P1 BASIC10.78□□□□□ -0.68
Chmp2aQ9DB34 Nme6-206ENSMUST00000197627 905 ntTSL 3 BASIC10.78□□□□□ -0.68
Chmp2aQ9DB34 Lsm8-204ENSMUST00000201141 503 ntTSL 3 BASIC10.78□□□□□ -0.68
Chmp2aQ9DB34 Gm18010-201ENSMUST00000203553 202 ntBASIC10.78□□□□□ -0.68
Chmp2aQ9DB34 Gm44196-203ENSMUST00000204359 1190 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Chmp2aQ9DB34 AC154176.1-201ENSMUST00000225897 220 ntBASIC10.78□□□□□ -0.68
Chmp2aQ9DB34 Sun5-201ENSMUST00000028982 1157 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Chmp2aQ9DB34 Calm4-201ENSMUST00000042219 917 ntAPPRIS P1 BASIC10.78□□□□□ -0.68
Chmp2aQ9DB34 Sept9-204ENSMUST00000106349 2932 ntAPPRIS P3 TSL 1 (best) BASIC10.78□□□□□ -0.68
Chmp2aQ9DB34 Rfx6-202ENSMUST00000122922 3464 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
Chmp2aQ9DB34 Gpcpd1-202ENSMUST00000060955 3686 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Chmp2aQ9DB34 Als2cr12-206ENSMUST00000191565 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Chmp2aQ9DB34 Pcdh15-229ENSMUST00000155701 2754 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Chmp2aQ9DB34 Ticam1-201ENSMUST00000058136 2992 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Chmp2aQ9DB34 Gm28042-202ENSMUST00000129685 4472 ntAPPRIS P5 TSL 5 BASIC10.78□□□□□ -0.68
Chmp2aQ9DB34 Agbl4-203ENSMUST00000106587 2631 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Chmp2aQ9DB34 Uqcrc2-201ENSMUST00000033176 1896 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Chmp2aQ9DB34 Slfn1-201ENSMUST00000037994 1864 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Chmp2aQ9DB34 Ube2q2-203ENSMUST00000122441 2081 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Chmp2aQ9DB34 Flna-202ENSMUST00000101454 8345 ntAPPRIS P2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Chmp2aQ9DB34 Stk31-201ENSMUST00000024171 3237 ntAPPRIS P2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Chmp2aQ9DB34 Kcnv1-201ENSMUST00000022967 4389 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Chmp2aQ9DB34 Sec22c-201ENSMUST00000078547 5713 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Chmp2aQ9DB34 Alx1-203ENSMUST00000167156 2689 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
Chmp2aQ9DB34 Zfyve1-201ENSMUST00000048319 4036 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Chmp2aQ9DB34 Cyp2b10-202ENSMUST00000072438 1916 ntAPPRIS P2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Chmp2aQ9DB34 Prorsd1-202ENSMUST00000133103 2126 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Chmp2aQ9DB34 Harbi1-201ENSMUST00000090608 2308 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Chmp2aQ9DB34 Acot11-202ENSMUST00000102762 5689 ntAPPRIS P3 TSL 1 (best) BASIC10.78□□□□□ -0.68
Chmp2aQ9DB34 Cenpo-202ENSMUST00000111169 1550 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.68
Chmp2aQ9DB34 Acsl5-201ENSMUST00000043150 4243 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Chmp2aQ9DB34 Kansl1-201ENSMUST00000018556 5061 ntAPPRIS P2 TSL 1 (best) BASIC10.77□□□□□ -0.68
Chmp2aQ9DB34 Tmem39a-204ENSMUST00000163884 1645 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Chmp2aQ9DB34 4930417O13Rik-203ENSMUST00000204911 3458 ntTSL 1 (best) BASIC10.77□□□□□ -0.68
Chmp2aQ9DB34 Gfm2-201ENSMUST00000022170 3089 ntAPPRIS ALT2 TSL 2 BASIC10.77□□□□□ -0.68
Chmp2aQ9DB34 Themis2-201ENSMUST00000045154 3079 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Chmp2aQ9DB34 Odf2-209ENSMUST00000113764 2450 ntAPPRIS P3 TSL 5 BASIC10.77□□□□□ -0.69
Chmp2aQ9DB34 Rpgrip1-201ENSMUST00000111600 4565 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Chmp2aQ9DB34 AC166359.1-201ENSMUST00000220243 1871 ntBASIC10.77□□□□□ -0.69
Chmp2aQ9DB34 Gm45501-201ENSMUST00000211468 2526 ntBASIC10.77□□□□□ -0.69
Chmp2aQ9DB34 Gm15604-201ENSMUST00000118350 1456 ntBASIC10.77□□□□□ -0.69
Chmp2aQ9DB34 Triml2-201ENSMUST00000163869 1467 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.69
Chmp2aQ9DB34 Il15ra-203ENSMUST00000114831 882 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Chmp2aQ9DB34 Gm11235-201ENSMUST00000117763 333 ntBASIC10.77□□□□□ -0.69
Chmp2aQ9DB34 Gm15032-201ENSMUST00000118547 411 ntBASIC10.77□□□□□ -0.69
Chmp2aQ9DB34 Prelid3b-203ENSMUST00000120822 622 ntTSL 3 BASIC10.77□□□□□ -0.69
Chmp2aQ9DB34 Ywhaq-ps3-201ENSMUST00000120944 738 ntBASIC10.77□□□□□ -0.69
Chmp2aQ9DB34 Gm14222-201ENSMUST00000128681 575 ntTSL 2 BASIC10.77□□□□□ -0.69
Chmp2aQ9DB34 Gm12681-201ENSMUST00000132337 700 ntTSL 3 BASIC10.77□□□□□ -0.69
Chmp2aQ9DB34 March10-204ENSMUST00000138977 2979 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.69
Chmp2aQ9DB34 Gm13558-201ENSMUST00000140464 554 ntTSL 2 BASIC10.77□□□□□ -0.69
Chmp2aQ9DB34 Pfdn5-203ENSMUST00000165671 830 ntTSL 2 BASIC10.77□□□□□ -0.69
Chmp2aQ9DB34 Gm6291-201ENSMUST00000179994 309 ntBASIC10.77□□□□□ -0.69
Chmp2aQ9DB34 Gm9625-201ENSMUST00000180422 955 ntBASIC10.77□□□□□ -0.69
Chmp2aQ9DB34 Gm9916-201ENSMUST00000192943 1228 ntBASIC10.77□□□□□ -0.69
Chmp2aQ9DB34 Gm38349-201ENSMUST00000195732 462 ntBASIC10.77□□□□□ -0.69
Chmp2aQ9DB34 Gm43244-201ENSMUST00000196994 1285 ntBASIC10.77□□□□□ -0.69
Chmp2aQ9DB34 Gm44939-201ENSMUST00000206939 814 ntTSL 3 BASIC10.77□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 59.6 ms