Protein–RNA interactions for Protein: Q80TF3

Pcdh19, Protocadherin-19, mousemouse

Predictions only

Length 1,145 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh19Q80TF3 Epha6-203ENSMUST00000161358 1356 ntTSL 1 (best) BASIC10.27□□□□□ -0.76
Pcdh19Q80TF3 Fam90a1b-201ENSMUST00000044989 2939 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
Pcdh19Q80TF3 Pde2a-202ENSMUST00000166652 3977 ntAPPRIS P3 TSL 1 (best) BASIC10.27□□□□□ -0.76
Pcdh19Q80TF3 Ppp1r18-201ENSMUST00000113814 3131 ntAPPRIS P2 TSL 1 (best) BASIC10.27□□□□□ -0.76
Pcdh19Q80TF3 AU019823-201ENSMUST00000131351 3316 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
Pcdh19Q80TF3 Lsamp-201ENSMUST00000078873 2951 ntTSL 1 (best) BASIC10.27□□□□□ -0.76
Pcdh19Q80TF3 4933406M09Rik-201ENSMUST00000162187 1768 ntAPPRIS P1 TSL 2 BASIC10.27□□□□□ -0.77
Pcdh19Q80TF3 Styx-205ENSMUST00000226873 12974 ntAPPRIS P1 BASIC10.27□□□□□ -0.77
Pcdh19Q80TF3 Tmem33-201ENSMUST00000037918 6247 ntAPPRIS P3 TSL 1 (best) BASIC10.27□□□□□ -0.77
Pcdh19Q80TF3 Theg-201ENSMUST00000020566 1444 ntAPPRIS P4 TSL 1 (best) BASIC10.27□□□□□ -0.77
Pcdh19Q80TF3 Gm26868-201ENSMUST00000181927 2655 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Pcdh19Q80TF3 Plec-206ENSMUST00000074834 14855 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.77
Pcdh19Q80TF3 Nos3-201ENSMUST00000030834 4132 ntAPPRIS P2 TSL 1 (best) BASIC10.27□□□□□ -0.77
Pcdh19Q80TF3 Scmh1-203ENSMUST00000106298 1995 ntAPPRIS P3 TSL 1 (best) BASIC10.27□□□□□ -0.77
Pcdh19Q80TF3 Hspa2-201ENSMUST00000080449 2524 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Pcdh19Q80TF3 Gm20649-201ENSMUST00000160950 2740 ntTSL 2 BASIC10.27□□□□□ -0.77
Pcdh19Q80TF3 Tomm40l-201ENSMUST00000005817 4712 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Pcdh19Q80TF3 Tprkb-204ENSMUST00000113752 749 ntAPPRIS P1 TSL 5 BASIC10.27□□□□□ -0.77
Pcdh19Q80TF3 Gm8216-201ENSMUST00000117232 601 ntBASIC10.27□□□□□ -0.77
Pcdh19Q80TF3 Gm16420-201ENSMUST00000120258 856 ntBASIC10.27□□□□□ -0.77
Pcdh19Q80TF3 Gm15982-201ENSMUST00000121681 554 ntBASIC10.27□□□□□ -0.77
Pcdh19Q80TF3 3010001F23Rik-201ENSMUST00000130625 876 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Pcdh19Q80TF3 Ly6i-202ENSMUST00000166694 620 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Pcdh19Q80TF3 Csn3-201ENSMUST00000001667 991 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Pcdh19Q80TF3 Gm29595-202ENSMUST00000187954 466 ntTSL 3 BASIC10.27□□□□□ -0.77
Pcdh19Q80TF3 Gm29346-201ENSMUST00000188147 255 ntTSL 3 BASIC10.27□□□□□ -0.77
Pcdh19Q80TF3 Gm37362-201ENSMUST00000194567 634 ntTSL 5 BASIC10.27□□□□□ -0.77
Pcdh19Q80TF3 Ghrl-203ENSMUST00000203588 237 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Pcdh19Q80TF3 Cnot2-201ENSMUST00000020374 1059 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Pcdh19Q80TF3 Gm44939-201ENSMUST00000206939 814 ntTSL 3 BASIC10.27□□□□□ -0.77
Pcdh19Q80TF3 Gm34908-201ENSMUST00000207222 569 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Pcdh19Q80TF3 Gm32786-201ENSMUST00000211351 628 ntTSL 3 BASIC10.27□□□□□ -0.77
Pcdh19Q80TF3 Gm9619-201ENSMUST00000211587 762 ntBASIC10.27□□□□□ -0.77
Pcdh19Q80TF3 Gm9644-201ENSMUST00000212828 1183 ntBASIC10.27□□□□□ -0.77
Pcdh19Q80TF3 Olfr967-202ENSMUST00000213358 1210 ntAPPRIS P1 TSL 5 BASIC10.27□□□□□ -0.77
Pcdh19Q80TF3 AC129597.1-201ENSMUST00000223046 1234 ntBASIC10.27□□□□□ -0.77
Pcdh19Q80TF3 AC133517.1-201ENSMUST00000225825 594 ntBASIC10.27□□□□□ -0.77
Pcdh19Q80TF3 Gm6564-201ENSMUST00000075377 619 ntBASIC10.27□□□□□ -0.77
Pcdh19Q80TF3 Mrps14-202ENSMUST00000097193 787 ntTSL 2 BASIC10.27□□□□□ -0.77
Pcdh19Q80TF3 Gm16429-202ENSMUST00000201400 1848 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Pcdh19Q80TF3 Gm7971-201ENSMUST00000086950 1848 ntAPPRIS P1 TSL 5 BASIC10.27□□□□□ -0.77
Pcdh19Q80TF3 Ano10-203ENSMUST00000214409 2384 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Pcdh19Q80TF3 Dgcr2-201ENSMUST00000012152 4045 ntAPPRIS P3 TSL 1 (best) BASIC10.27□□□□□ -0.77
Pcdh19Q80TF3 Scrn1-201ENSMUST00000019268 4810 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Pcdh19Q80TF3 Gm45170-201ENSMUST00000206746 1671 ntBASIC10.27□□□□□ -0.77
Pcdh19Q80TF3 Slc38a3-202ENSMUST00000167868 3151 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Pcdh19Q80TF3 Fubp1-209ENSMUST00000198227 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.77
Pcdh19Q80TF3 Ftsj1-201ENSMUST00000033513 3425 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Pcdh19Q80TF3 Copa-206ENSMUST00000135192 4622 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Pcdh19Q80TF3 Itgal-205ENSMUST00000170971 3662 ntAPPRIS ALT2 TSL 5 BASIC10.27□□□□□ -0.77
Pcdh19Q80TF3 Gm5475-202ENSMUST00000148928 2320 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.77
Pcdh19Q80TF3 Cxcl12-201ENSMUST00000073043 5627 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Pcdh19Q80TF3 4632415L05Rik-202ENSMUST00000198527 4087 ntBASIC10.27□□□□□ -0.77
Pcdh19Q80TF3 Slc4a9-201ENSMUST00000074298 2714 ntAPPRIS P3 TSL 5 BASIC10.27□□□□□ -0.77
Pcdh19Q80TF3 Myo5a-201ENSMUST00000123128 11702 ntTSL 5 BASIC10.27□□□□□ -0.77
Pcdh19Q80TF3 Plagl2-201ENSMUST00000056924 5485 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Pcdh19Q80TF3 Per1-202ENSMUST00000101004 3507 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Pcdh19Q80TF3 Gm2721-201ENSMUST00000222380 1571 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Pcdh19Q80TF3 Cyp7b1-201ENSMUST00000035625 2166 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Pcdh19Q80TF3 4930432K21Rik-202ENSMUST00000118856 2366 ntAPPRIS P4 TSL 1 (best) BASIC10.26□□□□□ -0.77
Pcdh19Q80TF3 Prss57-203ENSMUST00000169684 2841 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Pcdh19Q80TF3 Hdac7-205ENSMUST00000118294 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Pcdh19Q80TF3 Krt75-201ENSMUST00000042957 3266 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Pcdh19Q80TF3 Pcdh15-233ENSMUST00000191709 5346 ntAPPRIS ALT2 TSL 5 BASIC10.26□□□□□ -0.77
Pcdh19Q80TF3 Firre-206ENSMUST00000203933 5555 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Pcdh19Q80TF3 Acacb-202ENSMUST00000102582 8788 ntAPPRIS P1 TSL 5 BASIC10.26□□□□□ -0.77
Pcdh19Q80TF3 Steap3-201ENSMUST00000112639 2931 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Pcdh19Q80TF3 Trp53inp2-201ENSMUST00000043237 3979 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Pcdh19Q80TF3 Klhl29-202ENSMUST00000218384 2716 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Pcdh19Q80TF3 Gtf2i-223ENSMUST00000174513 4021 ntAPPRIS ALT2 TSL 2 BASIC10.26□□□□□ -0.77
Pcdh19Q80TF3 Gm14603-201ENSMUST00000121275 448 ntBASIC10.26□□□□□ -0.77
Pcdh19Q80TF3 Rbm48-202ENSMUST00000121877 617 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Pcdh19Q80TF3 Mrpl24-204ENSMUST00000121920 1115 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Pcdh19Q80TF3 H2afb3-201ENSMUST00000122050 348 ntAPPRIS P1 BASIC10.26□□□□□ -0.77
Pcdh19Q80TF3 Gm16069-201ENSMUST00000131146 545 ntTSL 3 BASIC10.26□□□□□ -0.77
Pcdh19Q80TF3 Gm22923-201ENSMUST00000174952 110 ntBASIC10.26□□□□□ -0.77
Pcdh19Q80TF3 Vmn2r-ps13-201ENSMUST00000176920 606 ntBASIC10.26□□□□□ -0.77
Pcdh19Q80TF3 D330041H03Rik-202ENSMUST00000180390 411 ntTSL 2 BASIC10.26□□□□□ -0.77
Pcdh19Q80TF3 4631405K08Rik-201ENSMUST00000180420 2112 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Pcdh19Q80TF3 Gm27444-201ENSMUST00000184157 137 ntBASIC10.26□□□□□ -0.77
Pcdh19Q80TF3 Gm29157-201ENSMUST00000188753 612 ntBASIC10.26□□□□□ -0.77
Pcdh19Q80TF3 Gm37858-201ENSMUST00000192759 1231 ntBASIC10.26□□□□□ -0.77
Pcdh19Q80TF3 Gm6069-201ENSMUST00000196501 463 ntBASIC10.26□□□□□ -0.77
Pcdh19Q80TF3 Gm19566-201ENSMUST00000199576 610 ntBASIC10.26□□□□□ -0.77
Pcdh19Q80TF3 Fkbp6-202ENSMUST00000201534 1287 ntAPPRIS P3 TSL 1 (best) BASIC10.26□□□□□ -0.77
Pcdh19Q80TF3 Gm7319-201ENSMUST00000210047 778 ntBASIC10.26□□□□□ -0.77
Pcdh19Q80TF3 Gm2716-201ENSMUST00000212350 643 ntBASIC10.26□□□□□ -0.77
Pcdh19Q80TF3 Gm35189-201ENSMUST00000219319 789 ntTSL 3 BASIC10.26□□□□□ -0.77
Pcdh19Q80TF3 A1cf-202ENSMUST00000224304 2968 ntAPPRIS ALT1 BASIC10.26□□□□□ -0.77
Pcdh19Q80TF3 AC134860.5-201ENSMUST00000225071 1249 ntBASIC10.26□□□□□ -0.77
Pcdh19Q80TF3 Sult1e1-201ENSMUST00000031201 1242 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Pcdh19Q80TF3 Ggta1-201ENSMUST00000044255 1221 ntAPPRIS P3 TSL 5 BASIC10.26□□□□□ -0.77
Pcdh19Q80TF3 Ptma-201ENSMUST00000045897 1216 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Pcdh19Q80TF3 Frmd6-201ENSMUST00000057859 4662 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Pcdh19Q80TF3 Tas2r135-201ENSMUST00000070178 1093 ntAPPRIS P1 BASIC10.26□□□□□ -0.77
Pcdh19Q80TF3 Vmn1r11-201ENSMUST00000071304 900 ntAPPRIS P2 BASIC10.26□□□□□ -0.77
Pcdh19Q80TF3 Mir326-201ENSMUST00000083637 95 ntBASIC10.26□□□□□ -0.77
Pcdh19Q80TF3 Olfr169-201ENSMUST00000090062 942 ntAPPRIS P1 BASIC10.26□□□□□ -0.77
Pcdh19Q80TF3 Kcnj9-201ENSMUST00000062387 3857 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Pcdh19Q80TF3 Gm36957-201ENSMUST00000192982 2824 ntBASIC10.26□□□□□ -0.77
Retrieved 100 of 76,532 protein–RNA pairs in 110.1 ms