Protein–RNA interactions for Protein: Q38HM4

Trim63, E3 ubiquitin-protein ligase TRIM63, mousemouse

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim63Q38HM4 1810020O05Rik-201ENSMUST00000162547 1047 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
Trim63Q38HM4 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC8.43□□□□□ -1.06
Trim63Q38HM4 Slc2a4rg-ps-202ENSMUST00000176590 1143 ntBASIC8.43□□□□□ -1.06
Trim63Q38HM4 Tcrg-C4-201ENSMUST00000179181 985 ntAPPRIS P1 BASIC8.43□□□□□ -1.06
Trim63Q38HM4 Anapc16-205ENSMUST00000182912 566 ntTSL 2 BASIC8.43□□□□□ -1.06
Trim63Q38HM4 Tmem242-203ENSMUST00000188282 822 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
Trim63Q38HM4 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
Trim63Q38HM4 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC8.43□□□□□ -1.06
Trim63Q38HM4 Gm42907-201ENSMUST00000199793 2148 ntBASIC8.43□□□□□ -1.06
Trim63Q38HM4 3110031N09Rik-201ENSMUST00000201115 326 ntBASIC8.43□□□□□ -1.06
Trim63Q38HM4 Mt3-203ENSMUST00000211930 477 ntTSL 2 BASIC8.43□□□□□ -1.06
Trim63Q38HM4 AC110091.1-201ENSMUST00000216004 691 ntTSL 3 BASIC8.43□□□□□ -1.06
Trim63Q38HM4 2310039L15Rik-203ENSMUST00000220058 727 ntTSL 5 BASIC8.43□□□□□ -1.06
Trim63Q38HM4 AC159635.1-201ENSMUST00000220905 2102 ntBASIC8.43□□□□□ -1.06
Trim63Q38HM4 Atf6-201ENSMUST00000027974 7246 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
Trim63Q38HM4 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC8.43□□□□□ -1.06
Trim63Q38HM4 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
Trim63Q38HM4 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC8.43□□□□□ -1.06
Trim63Q38HM4 Gm26226-201ENSMUST00000082509 116 ntBASIC8.43□□□□□ -1.06
Trim63Q38HM4 Tsta3-201ENSMUST00000023231 1311 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
Trim63Q38HM4 Fam50a-201ENSMUST00000114160 1383 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
Trim63Q38HM4 Efemp2-209ENSMUST00000167371 1382 ntTSL 5 BASIC8.43□□□□□ -1.06
Trim63Q38HM4 Ceacam9-201ENSMUST00000001984 1396 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
Trim63Q38HM4 Gm43839-201ENSMUST00000196183 2325 ntBASIC8.43□□□□□ -1.06
Trim63Q38HM4 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC8.43□□□□□ -1.06
Trim63Q38HM4 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
Trim63Q38HM4 Pkd1l1-203ENSMUST00000178195 6213 ntAPPRIS ALT2 TSL 5 BASIC8.43□□□□□ -1.06
Trim63Q38HM4 Henmt1-205ENSMUST00000196533 1491 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
Trim63Q38HM4 Csnk1d-202ENSMUST00000070575 3500 ntAPPRIS ALT1 TSL 1 (best) BASIC8.43□□□□□ -1.06
Trim63Q38HM4 Ap5s1-203ENSMUST00000110208 1521 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
Trim63Q38HM4 Mum1l1-203ENSMUST00000113043 4600 ntAPPRIS P1 TSL 5 BASIC8.43□□□□□ -1.06
Trim63Q38HM4 Catsperd-201ENSMUST00000112979 2565 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
Trim63Q38HM4 Etv1-204ENSMUST00000160701 1578 ntTSL 5 BASIC8.43□□□□□ -1.06
Trim63Q38HM4 Dclre1c-202ENSMUST00000100463 3705 ntAPPRIS ALT2 TSL 1 (best) BASIC8.43□□□□□ -1.06
Trim63Q38HM4 Gm19557-201ENSMUST00000182109 2765 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
Trim63Q38HM4 Pibf1-201ENSMUST00000022650 2797 ntAPPRIS P1 TSL 5 BASIC8.43□□□□□ -1.06
Trim63Q38HM4 Hsd17b13-201ENSMUST00000048118 1708 ntAPPRIS P3 TSL 1 (best) BASIC8.43□□□□□ -1.06
Trim63Q38HM4 Parva-201ENSMUST00000033030 4454 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Trim63Q38HM4 Dnajb5-202ENSMUST00000084662 3302 ntAPPRIS P2 TSL 1 (best) BASIC8.42□□□□□ -1.06
Trim63Q38HM4 Inpp5d-210ENSMUST00000169754 4937 ntAPPRIS P3 TSL 1 (best) BASIC8.42□□□□□ -1.06
Trim63Q38HM4 Ube4bos1-201ENSMUST00000141259 2227 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
Trim63Q38HM4 Ubox5-201ENSMUST00000028761 3731 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Trim63Q38HM4 Aldh1l2-201ENSMUST00000020497 6027 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Trim63Q38HM4 Top3a-202ENSMUST00000102668 3542 ntAPPRIS ALT2 TSL 1 (best) BASIC8.42□□□□□ -1.06
Trim63Q38HM4 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
Trim63Q38HM4 Gm14592-201ENSMUST00000117201 560 ntBASIC8.42□□□□□ -1.06
Trim63Q38HM4 Gm12859-201ENSMUST00000117834 427 ntBASIC8.42□□□□□ -1.06
Trim63Q38HM4 Gm11189-201ENSMUST00000117979 375 ntBASIC8.42□□□□□ -1.06
Trim63Q38HM4 Gm12337-201ENSMUST00000119634 400 ntBASIC8.42□□□□□ -1.06
Trim63Q38HM4 Gm5909-201ENSMUST00000119768 1281 ntBASIC8.42□□□□□ -1.06
Trim63Q38HM4 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC8.42□□□□□ -1.06
Trim63Q38HM4 Gm44805-202ENSMUST00000150569 587 ntAPPRIS P1 TSL 2 BASIC8.42□□□□□ -1.06
Trim63Q38HM4 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
Trim63Q38HM4 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
Trim63Q38HM4 Ctdspl-202ENSMUST00000172464 798 ntAPPRIS ALT1 TSL 5 BASIC8.42□□□□□ -1.06
Trim63Q38HM4 Gm20611-201ENSMUST00000177492 1131 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
Trim63Q38HM4 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC8.42□□□□□ -1.06
Trim63Q38HM4 Gm29261-201ENSMUST00000188535 678 ntTSL 5 BASIC8.42□□□□□ -1.06
Trim63Q38HM4 Gm19587-201ENSMUST00000191395 545 ntBASIC8.42□□□□□ -1.06
Trim63Q38HM4 Gm37852-201ENSMUST00000193027 350 ntBASIC8.42□□□□□ -1.06
Trim63Q38HM4 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC8.42□□□□□ -1.06
Trim63Q38HM4 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
Trim63Q38HM4 Gm20949-201ENSMUST00000206478 952 ntBASIC8.42□□□□□ -1.06
Trim63Q38HM4 Sdf2-201ENSMUST00000002133 1268 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Trim63Q38HM4 Tmem108-206ENSMUST00000215136 724 ntTSL 3 BASIC8.42□□□□□ -1.06
Trim63Q38HM4 Gm6960-201ENSMUST00000051629 639 ntBASIC8.42□□□□□ -1.06
Trim63Q38HM4 Lyz1-201ENSMUST00000092162 1263 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Trim63Q38HM4 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Trim63Q38HM4 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC8.42□□□□□ -1.06
Trim63Q38HM4 Dusp27-202ENSMUST00000192369 4045 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Trim63Q38HM4 Gm6580-201ENSMUST00000117504 1357 ntBASIC8.42□□□□□ -1.06
Trim63Q38HM4 4930543N07Rik-201ENSMUST00000209357 1364 ntTSL 5 BASIC8.42□□□□□ -1.06
Trim63Q38HM4 Sema6a-202ENSMUST00000076043 4123 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
Trim63Q38HM4 Gm5171-201ENSMUST00000214944 1415 ntBASIC8.42□□□□□ -1.06
Trim63Q38HM4 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Trim63Q38HM4 Gm43289-201ENSMUST00000200537 1475 ntBASIC8.42□□□□□ -1.06
Trim63Q38HM4 Gm15997-201ENSMUST00000202188 1491 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
Trim63Q38HM4 Xpo7-206ENSMUST00000228346 4491 ntBASIC8.42□□□□□ -1.06
Trim63Q38HM4 Gm4491-201ENSMUST00000159455 1523 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Trim63Q38HM4 Nt5c1b-203ENSMUST00000143739 1570 ntTSL 2 BASIC8.42□□□□□ -1.06
Trim63Q38HM4 Pcyt1a-201ENSMUST00000079791 4789 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Trim63Q38HM4 Nmt2-202ENSMUST00000091504 1676 ntTSL 5 BASIC8.42□□□□□ -1.06
Trim63Q38HM4 Gm38312-201ENSMUST00000195426 1746 ntBASIC8.42□□□□□ -1.06
Trim63Q38HM4 Gm5739-201ENSMUST00000208601 1703 ntBASIC8.42□□□□□ -1.06
Trim63Q38HM4 Lgi1-204ENSMUST00000196090 1789 ntTSL 5 BASIC8.42□□□□□ -1.06
Trim63Q38HM4 A930005G22Rik-201ENSMUST00000201293 1904 ntBASIC8.42□□□□□ -1.06
Trim63Q38HM4 Vmn1r16-202ENSMUST00000227283 5813 ntAPPRIS P2 BASIC8.42□□□□□ -1.06
Trim63Q38HM4 Gm6558-201ENSMUST00000191934 1973 ntBASIC8.42□□□□□ -1.06
Trim63Q38HM4 Gm36879-201ENSMUST00000212313 2060 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
Trim63Q38HM4 Tdpoz1-202ENSMUST00000181541 2322 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Trim63Q38HM4 Gm20043-201ENSMUST00000222267 2565 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
Trim63Q38HM4 Wasf1-201ENSMUST00000019975 2609 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Trim63Q38HM4 5430401H09Rik-202ENSMUST00000218836 2620 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
Trim63Q38HM4 Srpx2-202ENSMUST00000113304 2848 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Trim63Q38HM4 Rbm6-ps1-201ENSMUST00000186192 2870 ntBASIC8.42□□□□□ -1.06
Trim63Q38HM4 Tcaim-201ENSMUST00000052740 3049 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Trim63Q38HM4 Etl4-205ENSMUST00000114607 3055 ntAPPRIS ALT2 TSL 5 BASIC8.42□□□□□ -1.06
Trim63Q38HM4 Gm37465-201ENSMUST00000192845 3290 ntBASIC8.42□□□□□ -1.06
Trim63Q38HM4 G3bp2-201ENSMUST00000113127 4182 ntAPPRIS ALT1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Trim63Q38HM4 Tbc1d24-207ENSMUST00000171189 4592 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
Retrieved 100 of 76,532 protein–RNA pairs in 57.2 ms