Protein–RNA interactions for Protein: O54890

Itgb3, Integrin beta-3, mousemouse

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Itgb3O54890 A930003A15Rik-201ENSMUST00000100083 746 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Itgb3O54890 Upp1-202ENSMUST00000101525 1157 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Itgb3O54890 Ifna9-201ENSMUST00000102807 573 ntAPPRIS P1 BASIC10.97□□□□□ -0.65
Itgb3O54890 Gm12009-201ENSMUST00000121361 1100 ntBASIC10.97□□□□□ -0.65
Itgb3O54890 Gm14798-201ENSMUST00000139695 1189 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Itgb3O54890 Ly6i-202ENSMUST00000166694 620 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Itgb3O54890 Muc2-202ENSMUST00000167366 711 ntTSL 5 BASIC10.97□□□□□ -0.65
Itgb3O54890 Gm11942-201ENSMUST00000180255 345 ntBASIC10.97□□□□□ -0.65
Itgb3O54890 Gm27444-201ENSMUST00000184157 137 ntBASIC10.97□□□□□ -0.65
Itgb3O54890 Gm28391-201ENSMUST00000185202 379 ntBASIC10.97□□□□□ -0.65
Itgb3O54890 Gm29528-201ENSMUST00000186699 379 ntBASIC10.97□□□□□ -0.65
Itgb3O54890 Gm29526-201ENSMUST00000187217 379 ntBASIC10.97□□□□□ -0.65
Itgb3O54890 Gm37858-201ENSMUST00000192759 1231 ntBASIC10.97□□□□□ -0.65
Itgb3O54890 Gm5340-201ENSMUST00000203733 880 ntBASIC10.97□□□□□ -0.65
Itgb3O54890 Ndufa4-205ENSMUST00000204978 610 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Itgb3O54890 Gm44709-201ENSMUST00000207649 448 ntTSL 5 BASIC10.97□□□□□ -0.65
Itgb3O54890 1700086D15Rik-201ENSMUST00000020855 1092 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
Itgb3O54890 Gm6331-201ENSMUST00000217890 450 ntBASIC10.97□□□□□ -0.65
Itgb3O54890 CT009764.1-201ENSMUST00000222260 483 ntBASIC10.97□□□□□ -0.65
Itgb3O54890 AC107711.4-201ENSMUST00000228948 440 ntBASIC10.97□□□□□ -0.65
Itgb3O54890 Eif3m-201ENSMUST00000028592 1283 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Itgb3O54890 Tnfrsf18-201ENSMUST00000040274 804 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Itgb3O54890 Gm10228-201ENSMUST00000089105 532 ntAPPRIS P1 BASIC10.97□□□□□ -0.65
Itgb3O54890 Rps8-ps4-201ENSMUST00000092523 612 ntBASIC10.97□□□□□ -0.65
Itgb3O54890 Krtap3-2-201ENSMUST00000092699 1031 ntAPPRIS P1 BASIC10.97□□□□□ -0.65
Itgb3O54890 Gpr179-201ENSMUST00000093942 9219 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
Itgb3O54890 Cdh20-201ENSMUST00000062528 4012 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Itgb3O54890 Pax5-202ENSMUST00000102932 1460 ntTSL 5 BASIC10.97□□□□□ -0.65
Itgb3O54890 Urod-201ENSMUST00000030446 1489 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Itgb3O54890 Brpf1-208ENSMUST00000203577 4468 ntTSL 5 BASIC10.97□□□□□ -0.65
Itgb3O54890 Gm42731-201ENSMUST00000201839 1641 ntBASIC10.97□□□□□ -0.65
Itgb3O54890 Adat1-202ENSMUST00000120457 1677 ntTSL 5 BASIC10.97□□□□□ -0.65
Itgb3O54890 Stard4-201ENSMUST00000025236 5097 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Itgb3O54890 Olfr707-205ENSMUST00000214112 1735 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
Itgb3O54890 Sfmbt2-202ENSMUST00000114861 1813 ntTSL 5 BASIC10.97□□□□□ -0.65
Itgb3O54890 Cyp2b10-202ENSMUST00000072438 1916 ntAPPRIS P2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Itgb3O54890 Trim61-201ENSMUST00000078409 1977 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Itgb3O54890 Casp14-201ENSMUST00000005488 2336 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Itgb3O54890 Mrrf-201ENSMUST00000028250 2623 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Itgb3O54890 Fbrs-201ENSMUST00000048896 2650 ntAPPRIS P2 TSL 5 BASIC10.97□□□□□ -0.65
Itgb3O54890 Gm17029-203ENSMUST00000153443 2758 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Itgb3O54890 Uimc1-204ENSMUST00000127195 2936 ntAPPRIS ALT2 TSL 5 BASIC10.97□□□□□ -0.65
Itgb3O54890 Rad50-201ENSMUST00000020649 5153 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Itgb3O54890 Ogfod1-202ENSMUST00000093301 5141 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Itgb3O54890 Ldb3-205ENSMUST00000090040 4981 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Itgb3O54890 Pnpla6-201ENSMUST00000004681 4438 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Itgb3O54890 Nfx1-201ENSMUST00000030133 4349 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Itgb3O54890 Nfkbiz-201ENSMUST00000036273 4115 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.65
Itgb3O54890 Rbm10-204ENSMUST00000115374 3564 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.65
Itgb3O54890 Mms19-201ENSMUST00000026168 3162 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.65
Itgb3O54890 Cxcl12-203ENSMUST00000112871 3132 ntAPPRIS P4 TSL 1 (best) BASIC10.96□□□□□ -0.65
Itgb3O54890 Olfr30-202ENSMUST00000215691 2404 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.65
Itgb3O54890 AC140462.2-201ENSMUST00000225718 2433 ntBASIC10.96□□□□□ -0.65
Itgb3O54890 LMLN2-201ENSMUST00000224691 2342 ntAPPRIS P5 BASIC10.96□□□□□ -0.65
Itgb3O54890 Slc25a12-206ENSMUST00000151937 6351 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Itgb3O54890 Rpe65-202ENSMUST00000196999 1863 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Itgb3O54890 Gm7823-201ENSMUST00000120761 1623 ntBASIC10.96□□□□□ -0.65
Itgb3O54890 Lonp2-207ENSMUST00000163987 1556 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Itgb3O54890 Commd1-204ENSMUST00000159081 4508 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Itgb3O54890 Atp5s-201ENSMUST00000021372 1485 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Itgb3O54890 Pear1-201ENSMUST00000029714 4260 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.65
Itgb3O54890 Scaf1-201ENSMUST00000085383 4293 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Itgb3O54890 Spata2-201ENSMUST00000057627 4012 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Itgb3O54890 A530030E21Rik-201ENSMUST00000199551 1310 ntBASIC10.96□□□□□ -0.65
Itgb3O54890 Spata17-201ENSMUST00000027908 1303 ntAPPRIS P3 TSL 2 BASIC10.96□□□□□ -0.65
Itgb3O54890 Spaca3-201ENSMUST00000103222 831 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Itgb3O54890 Gm24471-201ENSMUST00000104485 131 ntBASIC10.96□□□□□ -0.65
Itgb3O54890 Gm11205-201ENSMUST00000137738 431 ntTSL 5 BASIC10.96□□□□□ -0.65
Itgb3O54890 Gm15839-201ENSMUST00000138684 612 ntTSL 3 BASIC10.96□□□□□ -0.65
Itgb3O54890 Gm12847-201ENSMUST00000156219 413 ntTSL 5 BASIC10.96□□□□□ -0.65
Itgb3O54890 Gm16574-201ENSMUST00000159301 745 ntBASIC10.96□□□□□ -0.65
Itgb3O54890 Rab11a-204ENSMUST00000167569 726 ntTSL 3 BASIC10.96□□□□□ -0.65
Itgb3O54890 Gm22994-201ENSMUST00000175422 82 ntBASIC10.96□□□□□ -0.65
Itgb3O54890 Gm7627-201ENSMUST00000183205 999 ntBASIC10.96□□□□□ -0.65
Itgb3O54890 Mir6359-201ENSMUST00000183668 81 ntBASIC10.96□□□□□ -0.65
Itgb3O54890 1810018F18Rik-201ENSMUST00000188253 277 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Itgb3O54890 Gm18894-201ENSMUST00000198794 694 ntBASIC10.96□□□□□ -0.65
Itgb3O54890 Clec2h-202ENSMUST00000204416 386 ntTSL 3 BASIC10.96□□□□□ -0.65
Itgb3O54890 Smim23-201ENSMUST00000020508 620 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Itgb3O54890 3930402G23Rik-202ENSMUST00000208615 581 ntTSL 3 BASIC10.96□□□□□ -0.65
Itgb3O54890 Gm19090-201ENSMUST00000218187 774 ntBASIC10.96□□□□□ -0.65
Itgb3O54890 Ebi3-201ENSMUST00000003274 1170 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Itgb3O54890 Ccdc153-201ENSMUST00000092426 1087 ntAPPRIS P2 TSL 2 BASIC10.96□□□□□ -0.65
Itgb3O54890 Krtap3-3-201ENSMUST00000092700 736 ntAPPRIS P1 BASIC10.96□□□□□ -0.65
Itgb3O54890 Tfip11-201ENSMUST00000031288 3560 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Itgb3O54890 Poc5-201ENSMUST00000099295 5183 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Itgb3O54890 Nudcd1-201ENSMUST00000038719 2600 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.66
Itgb3O54890 Olfr46-203ENSMUST00000214180 7750 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.66
Itgb3O54890 Mindy4-201ENSMUST00000053094 4270 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Itgb3O54890 Nr2c1-201ENSMUST00000092213 2376 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.66
Itgb3O54890 Ttc23-203ENSMUST00000107471 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.66
Itgb3O54890 AC126459.1-201ENSMUST00000214791 2123 ntBASIC10.96□□□□□ -0.66
Itgb3O54890 Nfx1-203ENSMUST00000098143 4594 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Itgb3O54890 Gpm6b-207ENSMUST00000112229 3203 ntAPPRIS ALT1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Itgb3O54890 Ifitm7-202ENSMUST00000178021 1823 ntAPPRIS ALT2 BASIC10.95□□□□□ -0.66
Itgb3O54890 Mcm3-201ENSMUST00000053266 3031 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Itgb3O54890 Cd2bp2-203ENSMUST00000205316 2912 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Itgb3O54890 Gm31763-202ENSMUST00000218205 1724 ntBASIC10.95□□□□□ -0.66
Itgb3O54890 Exosc9-201ENSMUST00000029269 1617 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Itgb3O54890 Atxn7l3-203ENSMUST00000107134 3712 ntAPPRIS ALT1 TSL 5 BASIC10.95□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 76.4 ms